ID AB116632; SV 1; linear; genomic DNA; STD; VRL; 2791 BP. XX AC AB116632; XX DT 20-JAN-2004 (Rel. 78, Created) DT 03-JUN-2010 (Rel. 105, Last updated, Version 5) XX DE Tomato yellow leaf curl virus-Mild [Japan:Yaizu] DNA, complete genome. XX KW . XX OS Tomato yellow leaf curl virus-Mild [Japan:Yaizu] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2791 RA Ueda S., Kimura T., Onuki M., Hanada K., Iwanami T.; RT ; RL Submitted (07-AUG-2003) to the INSDC. RL Contact:Shigenori Ueda National Agricultural Institute for Kyushu Okinawa RL Region; 1823 Mii, Kurume, Fukuoka 839-8503, Japan XX RN [2] RA Ueda S., Kimura T., Onuki M., Hanada K., Iwanami T.; RT "Three distinct groups of isolates of Tomato yellow leaf curl virus in RT Japan and construction of an infectious clone"; RL J. Gen. Plant Pathol. 70:232-238(2004). XX DR MD5; 8ad7127fe30115477e488f613d2db77d. DR EuropePMC; PMC2224568; 17977971. XX FH Key Location/Qualifiers FH FT source 1..2791 FT /organism="Tomato yellow leaf curl virus-Mild FT [Japan:Yaizu]" FT /host="Lycopersicon esculentum" FT /strain="SzY" FT /mol_type="genomic DNA" FT /country="Japan:Shizuoka, Yaizu" FT /note="TYLCV-Mld[JR:Yai]" FT /db_xref="taxon:503403" FT CDS 318..668 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:Q764G2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q764G2" FT /protein_id="BAD07432.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKS" FT CDS 478..1254 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q764G1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q764G1" FT /protein_id="BAD07433.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDIPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYD FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1251..1655) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="C3" FT /db_xref="GOA:Q764G0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q764G0" FT /protein_id="BAD07434.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRHQVLKYLDSIGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT CDS complement(1396..1803) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="C2" FT /db_xref="GOA:Q764F9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q764F9" FT /protein_id="BAD07435.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT CDS complement(1712..2791) FT /codon_start=1 FT /transl_table=1 FT /gene="Rep" FT /product="replication-associated protein" FT /db_xref="GOA:Q764F8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q764F8" FT /protein_id="BAD07436.1" FT /translation="MVPPKRFQINCKNYFLTYPKCSLTKEEALSQLKNLETPTNKKYIK FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYV FT DKDGNTVDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRIIKELIPKDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENVVSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FASINQGPTQDSQEETNKA" FT CDS complement(2332..2634) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q764F7" FT /protein_id="BAD07437.1" FT /translation="MGNHISMCLSNLKGNSSAKISDSSTWYPQAGQHISIQTFRELNPV FT QTSSLMSIRTETPSTGVSFRSTDDLHVGVSSQPMTLTPQLLTQAVSQRLLESLKN" XX SQ Sequence 2791 BP; 765 A; 542 C; 609 G; 875 T; 0 other; atggccaatg agtaccgatt gaccaagatt tttacactta tccctggtat atcggtactc 60 aatatatagt gagtaccaaa tggcattttg gtaattttgt aaaagtacat tgcaattcaa 120 aattcaaaat tcaaaaatca aatcattaaa gcggccatcc gtataatatt accggatggc 180 cgcgcctttt ccttttatgt ggtccccatg aaggttccac agacgtcact gtcaaccaat 240 caaattgcat ccttaaacgt tagataagtg tgcatttgtc tttatatact tgctccccaa 300 gtagtttgtc ttgcaatatg tgggatccac ttctaaatga atttcctgaa tctgttcacg 360 gatttcgttg tatgttagct attaaatatt tgcagtccgt tgaggaaact tacgagccca 420 atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc cgtgactatg 480 tcgaagcgac caggcgatat aatcatttcc acgcccgcct cgaaggttcg ccgaaggctg 540 aacttcgaca gcccatacag cagccgtgct gctgtcccca ttgtccaagg cacaaacaag 600 cgacgatcat ggacgtacag gcccatgtac cggaagccca gaatatacag aatgtatcga 660 agtcctgata ttccccgtgg atgtgaaggc ccatgtaaag tacagtctta tgagcaacgg 720 gatgatatta agcatactgg tattgttcgt tgtgttagtg atgttactcg tggatctgga 780 attactcaca gagtgggtaa gaggttctgt gttaaatcga tatacttttt aggtaaagtc 840 tggatggatg aaaatatcaa gaagcagaac cacactaatc aggtcatgtt cttcttggtc 900 cgtgatagaa ggccctatgg aaacagccca atggattttg gacaggtttt taatatgttc 960 gataatgagc ccagtaccgc aacagtgaag aatgatttgc gggataggtt tcaagtgatg 1020 aggaaatttc atgctacagt tattggtggt ccctctggaa tgaaggaaca ggcattagtt 1080 aagagatttt ttagaattaa cagtcatgta acttataatc atcaggaggc agccaagtac 1140 gataaccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc ctctaatcca 1200 gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa ttaataaaat 1260 ttatatttta tatcatgagt ttctgttaca tttattgtgt tttcaagtac atcatacaat 1320 acatgatcaa ctgctctgat tacattgtta attgaaatta caccaatact atctaaatac 1380 ttaagaactt gatgtctaaa tactcttaag aaacgaccag tctgaggctg taatgtcgtc 1440 caaattcgga agttgagaaa acatttgtga atccccaata ccttcctgat gttgtggttg 1500 aatcttatct gaatggaaat gatgtcgtgg ttcattagaa atggcctctg gctgtgttct 1560 gttatcttga aatagagggg attgtttatc tcccagataa aaacgccatt ctctgcctga 1620 ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga ggtggaggta 1680 gtatgagcag ccacagtcta ggtctacacg cttacgcctt attggtttct tcttggctat 1740 cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg acgaaggttg 1800 cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga tattccctat 1860 atgaggaggt aggtcctgga ttgcagagga agatagtggg aattccccct ttaatttgaa 1920 tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg aattccttga 1980 agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccatgca tcattactgt 2040 acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct agagacctgg 2100 cccacattgt tttgcctgtt ctgctatcac cctcaatgac aatactatta ggtctccatg 2160 gccgcgcagc ggaagacacg acgttctcgg acacccatac ttcaagttca tctggaactt 2220 gattaaaaga tgaagataaa aagggagaaa tataaggagc cggaggctcc tgaaaaattc 2280 tatctaaatt actatttaaa ttatgaaatt gtaaaatata atctttcggt attaattctt 2340 taatgattct aagagcctct gacttactgc ctgagttaag agctgcggcg taagcgtcat 2400 tggctgactg ctgaccccca cgtgcagatc gtccgtcgat ctgaaactca ccccagtcga 2460 cggtgtttcc gtccttatcg acataagact tgacgtctga actggattta gctccctgaa 2520 tgtttggatg gaaatgtgct gccctgcttg gggataccag gtcgaagaat cgctgatttt 2580 ggcacttgaa tttcccttca aattggataa gcacatggag atgtggttcc ccattctcgt 2640 ggagttctct gcaaactttg atgtattttt tatttgtggg ggtttctagg ttttttaatt 2700 gggaaagtgc ttcttctttc gttaaggagc acttaggata tgtgaggaaa taatttttgc 2760 aatttatttg gaagcgcttg ggaggaacca t 2791 //