ID   AB092816; SV 1; linear; genomic RNA; STD; VRL; 1147 BP.
XX
AC   AB092816;
XX
DT   02-APR-2003 (Rel. 75, Created)
DT   26-JAN-2009 (Rel. 99, Last updated, Version 4)
XX
DE   Papaya leaf distortion mosaic virus gene for polyprotein precursor (NIb
DE   replicase and coat protein), partial cds, isolate: J199C.
XX
KW   .
XX
OS   Papaya leaf distortion mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1147
RA   Maoka T.;
RT   ;
RL   Submitted (03-OCT-2002) to the INSDC.
RL   Contact:Tetsuo Maoka National Agricultural Research Center for Hokkaido
RL   Region, Plant Virology Lab.; Hitsujigaoka 1, Toyohira, Sapporo 0628555,
RL   Japan URL    :http://cryo.naro.affrc.go.jp/
XX
RN   [2]
RX   DOI; 10.1094/PHYTO-95-0128.
RX   PUBMED; 18943981.
RA   Maoka T., Hataya T.;
RT   "The Complete Nucleotide Sequence and Biotype Variability of Papaya leaf
RT   distortion mosaic virus";
RL   Phytopathology 95(2):128-135(2005).
XX
DR   MD5; 07b3368859c6ceb2589d32ab5dcf4eec.
DR   EuropePMC; PMC4213569; 25337891.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1147
FT                   /organism="Papaya leaf distortion mosaic virus"
FT                   /host="Trichosanthes bracteatus"
FT                   /lab_host="Cucumis metuliferus (Cucumber)"
FT                   /strain="C"
FT                   /isolate="J199C"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Okinawa"
FT                   /clone="35"
FT                   /note="The nonpapaya-infecting type of PLDMV (PLDMV-C)"
FT                   /note="synonym: Papaya leaf-distortion mosaic potyvirus"
FT                   /db_xref="taxon:46917"
FT   CDS             <1..1047
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein precursor"
FT                   /db_xref="GOA:Q80LX0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q80LX0"
FT                   /protein_id="BAC67182.1"
FT                   /translation="YNHLATEGKAPYISETALKRLYTCEEGSADEILSYLEMCANDLNE
FT                   EEYFEDEDVSHQSALDAGKSTEDIQKENEEKQNKGKKKENKNKEVEKEHEKTSDSTNST
FT                   IVPNKEKDKDVDVGSSGSFIIPRIKSISNKLTMPKVKGKGILNLEFLLQYTPDQVDISN
FT                   TRASASQFSTWYEAVKESYGVSDNEMGIILNGLMVWCIENGTSPNINGMWFMMQGEEQI
FT                   EYPLQPIVENAKPTLRQIMAHFSNVAEAYIEKRNYEKPYMPRYGIQRNLTDMSLARYAF
FT                   DFYEMTSRTPARAREAHIQMKAAALRNAKNKMFGLDGKVGNATENTERHTADDVNHNTH
FT                   AFTGAHYY"
FT   mat_peptide     <1..171
FT                   /gene="NIb"
FT                   /product="NIb replicase"
FT   mat_peptide     172..1044
FT                   /gene="CP"
FT                   /product="coat protein"
FT   3'UTR           1048..>1147
XX
SQ   Sequence 1147 BP; 405 A; 210 C; 252 G; 280 T; 0 other;
     tacaatcatc ttgcaactga gggaaaagca ccgtacatct cggaaacagc actcaaaaga        60
     ctttacacat gtgaagaggg aagtgctgat gaaattttgt catacttaga gatgtgtgcg       120
     aatgatctga atgaagaaga atactttgaa gatgaagatg tatctcacca atctgctctc       180
     gatgctggca agtccactga agacattcaa aaagagaatg aggaaaagca aaataaaggg       240
     aaaaagaaag aaaacaaaaa taaagaagtt gagaaggaac atgagaagac ttcagatagt       300
     acaaatagta ctatcgttcc aaacaaggaa aaagacaaag atgtcgatgt tggatcaagc       360
     ggatcattca ttataccacg aattaaatcg atatctaata aactcacaat gccaaaagtg       420
     aaaggaaaag gaattttaaa tttggagttt cttctacagt atacgccaga tcaagttgac       480
     atttcaaaca ctagggcaag cgcttcacag tttagtacat ggtacgaagc agtgaaagag       540
     tcctatggag tgtcagataa cgagatggga attatcctga atggattgat ggtttggtgt       600
     attgaaaatg gaacatctcc aaacattaac ggcatgtggt ttatgatgca aggggaggaa       660
     caaatcgaat acccccttca accaattgtg gaaaacgcaa aacccacttt gcgtcagatt       720
     atggctcact tcagcaacgt tgctgaagcg tacattgaaa agcgaaatta cgaaaagcca       780
     tatatgccga ggtacggtat tcaacggaac ctcaccgaca tgagcctggc gcgatatgct       840
     tttgatttct atgaaatgac atcaaggacg ccagctcggg cccgggaagc ccacatccaa       900
     atgaaagccg cagcactgcg gaacgcaaag aataaaatgt ttggtttgga tggaaaagtc       960
     ggaaatgcga ctgagaacac ggagcgccac actgcggatg atgttaatca taacactcat      1020
     gcattcacag gcgctcacta ttattagata tttatgtaag catagtttta tctagtatct      1080
     tttaaatcgc attagcttta ctttctagca cgtgtcagtg aggttttacc tcctactatc      1140
     tatgtgt                                                                1147
//