ID AB066288; SV 1; linear; genomic RNA; STD; VRL; 6056 BP. XX AC AB066288; XX DT 28-SEP-2002 (Rel. 73, Created) DT 15-DEC-2007 (Rel. 94, Last updated, Version 5) XX DE Tulip virus X genomic RNA, complete genome. XX KW . XX OS Tulip virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6056 RA Namba S., Yamaji Y.; RT ; RL Submitted (18-JUL-2001) to the INSDC. RL Contact:Shigetou Namba The University of Tokyo, Graduate School of RL Agricultural and Life Sciences, Department of Agricultural and RL Environmental Biology, Laboratory of Plant Pathology; 1-1-1 Yayoi, RL Bunkyo-ku, Tokyo 113-8657, Japan XX RN [2] RA Yamaji Y., Kagiwada S., Nakabayashi H., Ugaki M., Namba S.; RT "Complete nucleotide sequence of Tulip virus X (TVX-J): borderline between RT species and strains within the genus Potexvirus"; RL Arch. Virol. 107:833-837(2001). XX DR MD5; ff008cc71bb144299c3722139e83b490. XX FH Key Location/Qualifiers FH FT source 1..6056 FT /organism="Tulip virus X" FT /strain="J" FT /mol_type="genomic RNA" FT /db_xref="taxon:167132" FT CDS 96..4181 FT /codon_start=1 FT /transl_table=1 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q8BF56" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q8BF56" FT /protein_id="BAC16785.1" FT /translation="MSNLRNVFAQLTDPSLKAVIQDEAYRVMKKELTATRHSNPFAQSP FT AAADTLELLGINSHPLAITPHTHAAAKAIESDLYEVTSHYLPKENPVTFLFMKPSKLRY FT FHRGPQHSDIFLNAYIEPKDVPRYPTDTVIENISEITTPLAFMGDTLHFLEPSFITSLF FT ARSPKLQTLYATMVLPPEALYRLRSLYPEVYTLTYSDDGFMYIPGGHAGASYYHKYDQL FT QWLTAGYLISESTTVTAQRLETKGANHLFIFQRGRYLTPERRTFTTATSYVTVPEIFLP FT SSANARTPITKTLAMQIFFYIKSVKECRERDLWAKFRQLISTKELQHFQPDEATLLVNY FT FDFVANLDSATCHEDILSGSLLTRLLRPARVNWQALVRFFKGSPDHTKLIKALQWQPVL FT LEFKVSTVLVHKRTPPGFRHPLCRPLPVNEVDALTTAACANQSLPLDNLSEDQLEALHV FT LGSLRTDGESLPSPPKAPLETGPHPTPTISAAGPTKTVPTPNVEVSANPLTGTPLPDPD FT TLPWKAWLPHLRALGFEASEIQTDPRDHSTIMPITDIQTLPHETFDEYDSTSSPFDKVV FT ITLKQLNRSPTPWTPDRLRARAYASDIKNSRTGKALHKESQNWKETQTRLTETSETRLG FT LSVIHGAGGSGKSQALQTMLRNHPDLPVEVVLPTNELRXDWLRKLPHNPPEQFRTFERA FT FVSSTAPVVIFDDYGKLPQGFLEAFALCRPGLKLAILTGDPRQSTHHESNEQAMIAQLE FT PATKIFSALCRYYINATHRNVKELANKLGVYSSNPSPLHVSYGFRPEPGLHLLVPSLVK FT KAAFADAGHKVSTYAGCQGITAPKVQILLDSDTTMCSSEVLYTALSRAVDSIHFINSNA FT QSSAFWEKLEATPYLKTFLSLVREHKLEEFTAVEDPPQEVAPPVTHFPVENASHTLGLI FT QDSLADKYDREILNTNHGFTNCVQTEDLTVQLFSHQQAKDEALLWETIDARLRLSTPEA FT NLAEFHAKKDLGDVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQIKGG FT ERRQSPDFPENKILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRR FT YRDALGPNNIMINCERTPADLSRWVRNHWDFTKPXYANDFTAFDQSQDGAMLQFEILKA FT KFFNLPEWVIEGYLDIKLTPQIFTGTLAIMRLTGEGPTFDANTECNIAYTHTRFHIPDH FT VAQLYAGDDCAIAEVCQEKPSFALLKNRIALQAKPAYAPQTRGAWAEFCGYLITPKGLI FT KDPLKLHSSLELAKALRKQGRKDAITNVVANYSLDAKMAYSLGDDLQDLLSPEQAHLHQ FT VTVRDLTKFGGSPFLNSD" FT CDS 4183..4875 FT /codon_start=1 FT /transl_table=1 FT /gene="tgb1" FT /standard_name="triple gene block1" FT /db_xref="GOA:Q8BF55" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q8BF55" FT /protein_id="BAC16786.1" FT /translation="METILTALEKAGFTRTKLPLSKPLVIHAVAGAGKTTLIQSLLAEH FT PNLSAQTAGVPQNPTLDGAYIRKLTIPESNKLNILDEYAALHPLKGSWDVVCADPLQHP FT NTALRPHFLKTTSHRLCPATTGLISKLICPCSSSRPEPTKITVTGLFESPLFGTIISLD FT DTCHKLLQAHGLQPHCPESVLGLEFPVVTVVSSLPLHEIVEKHRLYISLSRHTQELHVR FT CPPPHPTH" FT CDS 4841..5170 FT /codon_start=1 FT /transl_table=1 FT /gene="tgb2" FT /standard_name="triple gene block2" FT /db_xref="GOA:Q8BF54" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q8BF54" FT /protein_id="BAC16787.1" FT /translation="MSGAHHLTPPTNLGKPVLAVSVGLSLALLAYTATRSTLPHVGDTT FT HSLPHGGRYVDGTKRIDYFRPHSPNSNPTYPFILLTILILSGLILLLSRRGPAPARCPC FT CQRPH" FT CDS 5007..5291 FT /codon_start=1 FT /transl_table=1 FT /gene="tgb3" FT /standard_name="triple gene block3" FT /db_xref="GOA:Q8BF53" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q8BF53" FT /protein_id="BAC16788.1" FT /translation="MEPNASTTSDHTPRTPIRPIPSSSSQSSSYPDSFYFCLAAVLLLL FT AVLAANALTNHHPCTVHINGHSTTLTGNCVITPELLTSLHPKLLSFQTP" FT CDS 5303..5926 FT /codon_start=1 FT /transl_table=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:Q8BF52" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q8BF52" FT /protein_id="BAC16789.1" FT /translation="MALNTAPNPEALAAMTLEVSSPAVPTPAELDTIAAGLTTLGVPAD FT SLISHALALVNACFDAGSSQFTTISGPSPTPTITLAQLAGVVKVSTTLRKFCRFYAKLI FT WNARLSRNRPPAGFARAYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANE FT TARSLGLFESRANSNNLATTSTQFTRGQLSNTSPTVQFLPSPED" XX SQ Sequence 6056 BP; 1502 A; 2233 C; 1226 G; 1093 T; 2 other; gaaaatcaac caacccagaa aacaccaaac caaactcaaa tagacatact cggccgtaaa 60 aggttaccaa tttgctaaga agctaggtaa acgacatgtc gaacttgaga aacgttttcg 120 cccagctcac agacccctca ctcaaggccg tcattcaaga cgaggcctac cgagtgatga 180 agaaagagct taccgccacc agacattcta accccttcgc acagagcccc gcggccgcag 240 acaccctcga actactaggt attaattcac acccacttgc cataacccca cacacccacg 300 ccgccgccaa ggctatcgag tcagacttgt acgaggtcac ctcccactac cttcccaagg 360 aaaaccctgt cacattcctg ttcatgaagc cctccaagct gagatacttc cacagagggc 420 cccagcacag tgacatcttc ctcaacgcct acatcgaacc caaggatgtc ccccgctacc 480 ccacggacac cgtcatcgaa aacatctcag agatcacaac acccctagcg tttatgggag 540 acacactgca ctttctcgaa ccctctttca taaccagcct cttcgcacgc tccccaaaac 600 tgcagaccct ttacgccaca atggtgttgc cccccgaagc gctctataga ctacgcagcc 660 tctacccaga ggtctacacg cttacctact ccgacgatgg attcatgtat atccccgggg 720 gccatgccgg cgcttcatac taccacaagt acgaccagct ccaatggctc accgccggct 780 atctcatctc agagagcacc actgtcactg cccaacggct agaaacaaag ggcgccaacc 840 acctcttcat cttccagagg ggccgctacc tcacccccga acgcaggacg ttcaccaccg 900 ccacctctta tgtgactgtg cccgagattt tcctaccctc cagcgccaac gcccgcacac 960 ccatcaccaa gactctggct atgcaaatct tcttctacat caagtccgtg aaggagtgtc 1020 gggaacgcga tctctgggcc aagttcagac aactgatcag cacaaaagag ctccaacact 1080 tccagccaga cgaggccaca ctactggtga actacttcga cttcgtcgcc aacctcgact 1140 ctgccacctg ccatgaggac atcctctccg gaagcctcct cacgcgactg cttcgcccgg 1200 ccagagttaa ctggcaagcc ttagtcaggt tcttcaaggg cagcccagac cacacgaaac 1260 tgatcaaggc tcttcagtgg caacccgtgc tgctggagtt caaagtgtcc accgtcctcg 1320 tccacaaaag gacgccgcca gggtttcgac accccctgtg ccgacccctg cccgtcaatg 1380 aggtggacgc gctcaccacc gccgcttgcg ccaaccaaag tctacctctc gacaaccttt 1440 cggaggacca gttggaggca ctgcatgtgc tgggctcctt acgcaccgac ggcgaatcgc 1500 tccccagccc gcctaaagct cctctggaga ccgggcccca cccgacaccc accatttccg 1560 cggcaggacc caccaaaact gtgccgactc ctaacgtcga agtgtccgcc aaccccctga 1620 ctggaacgcc cctcccagac cccgacaccc tcccctggaa ggcgtggttg cctcacctac 1680 gtgccctagg ctttgaagct tccgagattc agaccgaccc cagagaccac tcaaccatca 1740 tgcccatcac tgatatccag acgctcccac acgagacctt cgatgagtat gactccacct 1800 caagcccatt tgacaaggtt gtgataactc ttaagcaact caacagaagc cccacaccct 1860 ggacccccga ccgactgaga gcccgcgcct atgcctcgga catcaagaat tcccgcaccg 1920 ggaaagcact acacaaggag agccagaact ggaaagaaac ccaaacccgg ctcactgaaa 1980 cgtcggagac gcgactcggg ctctccgtca tccacggcgc gggaggctcc gggaaaagtc 2040 aggcccttca aaccatgctc cgcaatcacc ccgaccttcc agtcgaagtt gtgctgccta 2100 ccaacgaact ccgcrtagac tggctgcgta agctaccgca caaccccccg gaacaattcc 2160 gcactttcga gcgggccttc gtttcctcca cagcccccgt ggttatcttc gacgactatg 2220 gcaaactccc acagggtttc ctcgaagctt tcgcgctctg ccgccccggg ctgaaacttg 2280 ccatcctcac cggagacccc aggcagtcca cccaccacga atccaacgag caggcaatga 2340 tagcgcagtt ggaacccgcc acaaaaatct tcagcgccct ctgtaggtac tacatcaatg 2400 ccacccatag gaacgtgaaa gaactggcca acaagcttgg ggtgtattcc tcaaaccctt 2460 ccccactcca cgtatcctat gggtttcgac ctgaacccgg actacacctc ctcgtcccat 2520 cattggtgaa gaaagcggcg ttcgccgacg ccgggcacaa agtttccaca tatgccgggt 2580 gtcaaggcat cacagcgccc aaagttcaaa tcctcctcga cagcgacacc accatgtgct 2640 cttccgaggt cctctacaca gccctctccc gcgccgtgga ctccatccac ttcatcaact 2700 cgaacgcaca gtccagcgcc ttctgggaaa aactggaagc cacgccctac ctgaagacct 2760 tcctctccct ggtcagagag cacaagctgg aagagttcac tgctgtggag gacccaccac 2820 aagaggtagc gccccccgtg actcacttcc ccgtggaaaa cgcgtcacac acgttgggcc 2880 tcatccagga ctccctggcc gacaagtacg acagagaaat cctcaacacc aaccacggct 2940 tcaccaactg cgtccaaacc gaggatctca ccgtccaact cttctcccac cagcaagcca 3000 aagacgaagc cctcctgtgg gagaccatcg acgcccgctt acggctctcc accccagaag 3060 ctaacctggc tgagttccac gccaagaagg acctcggcga tgtcctctgg gaaaactacc 3120 accgggctat gaaactcccg aaagagcagc cagatttctc gccagaactg tgggagaggt 3180 gcgccgccga agtgcagcaa acgtatcttt ccaagtccct ccaacagatc aaaggaggtg 3240 aaaggcggca gtccccagat ttccccgaga acaagatcct catcttcctc aaatctcagt 3300 gggtgaagaa gatggaaaaa ctaggcgcgc ccaaaatcaa gccgggccaa accatcgcct 3360 ctttccaaca agcggcagtc atgctctatg gcaccatggc cagatacatg cggaggtaca 3420 gggatgccct cggccccaac aacatcatga ttaactgtga gaggactccc gcggacctga 3480 gtcgctgggt tcgcaaccat tgggacttca ccaagccctm ctacgccaac gacttcaccg 3540 ccttcgacca gtcacaagat ggagccatgc tgcagttcga gatcctcaaa gccaagttct 3600 tcaacctccc cgagtgggtc atagaggggt acttggacat caaactcaca ccccagatct 3660 tcaccggtac gctcgcaatc atgcggctca ccggcgaagg gcccaccttc gatgccaaca 3720 ctgagtgcaa tatcgcttac acgcacaccc gcttccacat cccggaccac gtcgcccaac 3780 tctacgctgg cgacgattgc gccattgccg aagtgtgtca ggaaaaaccc tccttcgcac 3840 tcctcaaaaa ccgcatcgcc ctgcaagcca aacccgccta tgcaccacag acgcgaggtg 3900 cctgggcgga attctgcggc tacctgatca cccctaaagg ccttatcaaa gatcccctaa 3960 agcttcacag ctccctagag ttggccaaag ccctacgtaa acaagggcgc aaggacgcca 4020 taaccaacgt cgtggcgaat tacagcctgg atgctaaaat ggcctactcc ttaggggacg 4080 atctccaaga cctcctctcc cctgaacaag cacacctcca ccaagttacg gttcgtgact 4140 tgactaagtt tggaggttca cctttcctca actccgatta gaatggaaac catacttaca 4200 gccttagaga aagccgggtt cacacgtacc aaactccctc tctccaaacc gttagttatc 4260 cacgccgtag ctggcgccgg gaaaaccaca ctaattcaaa gcctactcgc agaacacccc 4320 aacctgtccg cccaaaccgc aggcgttccc caaaacccaa cccttgacgg cgcctacatt 4380 agaaagctaa ccatccccga gtctaacaaa ctaaacatct tagacgagta cgcggcactc 4440 caccccctta aggggtcctg ggacgttgtc tgcgcggacc ctctccagca ccccaacacc 4500 gcactaaggc cccacttcct caagaccacc agccacaggc tctgcccagc cacgaccgga 4560 ctgatttcca aactcatctg cccctgcagc tcctcccgcc cggaaccgac aaaaataaca 4620 gtgactggcc tgtttgaaag ccccctcttc ggcaccatta tctccttgga cgacacctgc 4680 cacaagctac tacaagccca cggcctccaa ccccattgcc cagagagtgt cctgggccta 4740 gagttccctg ttgtcaccgt cgtctccagc ctacccctac acgagatcgt ggaaaaacac 4800 cgcctgtaca tcagcctctc acgacacaca caagagctcc atgtccggtg cccaccacct 4860 caccccaccc actaacctag gaaagccggt cttagcagtc tccgtcggcc tctccctcgc 4920 actcctcgcc tacaccgcca ctagatccac tctcccacac gtgggtgaca ccacccactc 4980 gctcccccac ggcggtcgct acgttgatgg aaccaaacgc atcgactact tccgaccaca 5040 ctccccgaac tccaatccga cctatccctt catcctcctc acaatcctca tcctatccgg 5100 actcattcta cttctgtctc gccgcggtcc tgctcctgct cgctgtcctt gctgccaacg 5160 ccctcactaa ccaccacccc tgcacggttc acatcaacgg tcactcaaca accctgacag 5220 gcaactgcgt cataacgccc gaacttctaa caagccttca ccctaaactg ttaagtttcc 5280 aaacaccttg aactaactaa ccatggccct caacaccgca ccaaaccccg aagccctagc 5340 cgccatgacc ctagaagtta gctctcccgc cgttcccaca cccgcagaac tcgacacaat 5400 cgccgctggc ctcaccaccc tcggagttcc cgcggactcc cttatctccc acgcccttgc 5460 cctcgtcaac gcttgcttcg acgcaggttc ctcacagttc acaaccatca gcggccccag 5520 ccccaccccc accattaccc tcgcccagct agcaggcgtc gtcaaagtct caaccactct 5580 ccgaaaattc tgccgcttct acgccaagct tatctggaac gcacgtctca gccgcaaccg 5640 gccgcccgca gggttcgctc gcgcctacgt caaaaccggc caaaagtggg ccggtttcga 5700 cttcttcgac ggcctcctca acccggccgc cctagagccc ctcggcggcc tcacccgtga 5760 acccaccccc gacgaaataa cagccaacga aaccgcgcgc tcccttggcc tcttcgaatc 5820 aagagctaac tctaacaacc tggccaccac gtccacccag ttcacccgtg gccagctctc 5880 taacacctcc cccacagtcc agttcctccc aagcccggag gattaaaccc tacagctgcg 5940 aacccaggaa cagctataaa aagtcctggt cttaccaaac ctaaccatct cgcaccccgg 6000 cgtacctttt gccctttaaa taaaagccct acaaccagtg aaagtctggt ggggcc 6056 //