ID AB033689; SV 1; linear; genomic RNA; STD; VRL; 7226 BP. XX AC AB033689; XX DT 21-APR-2000 (Rel. 63, Created) DT 19-SEP-2017 (Rel. 134, Last updated, Version 5) XX DE Japanese soil-borne wheat mosaic virus genomic RNA 1 for 152-kDa protein, DE 59-kDa readthrough protein, 37-kDa movement protein, complete and partial DE cds. XX KW . XX OS Japanese soil-borne wheat mosaic virus OC Viruses; Riboviria; Virgaviridae; Furovirus. XX RN [1] RP 1-7226 RA Shirako Y.; RT ; RL Submitted (19-OCT-1999) to the INSDC. RL Contact:Yukio Shirako University of Tokyo, Asian Center for Bioresources RL and Environmental Sciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan XX RN [2] RX DOI; .1006/viro.2000.0251. RX PUBMED; 10772992. RA Shirako Y., Suzuki N., French R.C.; RT "Similarity and divergence among viruses in the genus Furovirus"; RL Virology 270(1):201-207(2000). XX DR MD5; b90d601934fe2f863193b2b35de9f61e. DR RFAM; RF01080; UPD-PKib. DR RFAM; RF01104; SBWMV2_UPD-PKb. DR RFAM; RF01111; SBWMV2_UPD-PKk. XX FH Key Location/Qualifiers FH FT source 1..7226 FT /organism="Japanese soil-borne wheat mosaic virus" FT /segment="1" FT /strain="Japanese" FT /isolate="JT" FT /mol_type="genomic RNA" FT /db_xref="taxon:2030954" FT CDS 117..4121 FT /codon_start=1 FT /transl_table=1 FT /gene="ORF1" FT /product="152-kDa protein" FT /db_xref="GOA:Q9JGK3" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR013664" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9JGK3" FT /protein_id="BAA94796.1" FT /translation="MPIDSSNILGIINEEEVVRAAIATSATRTNSELHRTVCEQIREQF FT LDTVENQKQKKKIDVRRDLTQEQLQTLNELYPERHIVTSGCERGTHSFAAASRKIETDL FT LLSRMPKNANVYDIGGNWATHLKRKDTRKVHCCCPVLDFRDAQRKTTRWLSVEKFLSEK FT DSISEHCGQKVLEIQEDEDRISNNLRKGAVAPEDLTGRWYCENRFEDCVYRAEKAYGMA FT IHSIYDISLDDLVNAMEEKRIKYLVGTFLFSVELFLGKKRGELTSVDGFFEIDGGNVKY FT GFYDDTNCGYRHDLQQLMEYLTKTFVKAKGGSVFYLELTEQRGDVMFFSLTDATEARMH FT GVVEDESFKCIPIESKDSVVFPLFELNKKSDELEFTEVLLPKSFVRRTIEYTARLKTNQ FT LNPETVNSYLTSTNNTVIIGGSAKKTVEKVDAMLIPQITTTLIVWTELMNARQKKVLDR FT LRIQMKDDVGFMALAHASFSKMFGKVSFYQKALRSYANWISYCHGTDAIEFKNVPLYVE FT VKDRVKMWKQHAPNHGFSFDLEDLDEKIQLYKETERERKAISEFVVSDKLGDLSAAVCE FT KEAREVSVEYRDRRRKVEATDLRNGEVFTNFVDEWCNKEDHFNHVHIEVENKYSLLVKI FT VIAVWEAIVPPMQFAPVYIDDEERDPSDAESVVELDLSETDDGSGKGDYAEKPGSVEKA FT EKPIEARVSLEKGKEKVEVEDSAIRRGSGSSSPDSETSMEDELVSDGESLFGRSCQATI FT YSSTSLYGSSEDDTSVGSASSEIDSRVLEAVEAAIDEMEKEVSAEVLAAVVVVTESSEP FT EVSEVVVENAATVECKEQVVVDTTDSESDEERAKSWGSMAEEESDDTFYMNTMLISNKV FT QRSSLPKQPDFNKYNTVQQKAKQEYLWYLRCKMISDRTTLRSIIEDHLNGLYHNGNCDL FT PKNSCFLDYTKSVGGEWLYAKPLKAGHCYGVGFSLNSKGKIGKCELLKLMWDVDARGQP FT LERPFNTKMFQFVLLNDLTFLMNEMIIFRNLQDTLQRKERTKQASIVLKDGVPGCGKST FT WILNNANYIKDVVISVGKEAKEDLKEKFMKKYKCTESELGRIRTVDSYLMHDCGKKLRA FT TTVHFDEALMTHAGAVYFCADLLGARKVICQGDSQQIPFVNRVESIKLQFAKLVIDKTD FT LIRMTYRSPIDVAHYLNYKSFYTGGRITTKNEVVRSMSVVGPRNVRPMTSVYSVPYVPG FT VQYLTFTQTEKDDLFKALRSKGHVNVNTVHETQGKTFDDVILVRLKTTENEIYPGGRNS FT KPYTIVGLTRHRRSLVYYTAIEDRLFFDLTEMRGVMEDKLLKNLNVENGK" FT CDS <4122..5645 FT /codon_start=1 FT /transl_table=1 FT /product="59-kDa readthrough protein" FT /note="polymerase" FT /db_xref="GOA:Q9JGK2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q9JGK2" FT /protein_id="BAA94797.1" FT /translation="RFGSKYESILTCDREVKVPDTGDLVTIQDFYDRVFPGNSTVDSYF FT DGYEVATTDISIEVENCTVHTNKNTKVWQEKQGLVPVMRTAMPEKRQNGMVESLLALKK FT RNMAAPKLQEAVNEFEVIEHTIDRARTIFLNEDLIDTTPASTVESNMRWWEKQSYTARK FT QLLSETKILHEIDVCTYNFMIKNDVKPKMDLTPQSEYAALQTVVYPDKIVNALFGPVMK FT EINERIRYALKPHVVYNSRMNAEELNRTVEFLDPEEEYQSFEIDFSKFDKSKTSLHIRT FT VIEFYKLFGLEEMLAFLWEKSQCQTTVKDRLNGITAYLLYQQKSGNCDTYGSNTWSAAL FT ALLETMPLEKAKFMIFGGDDSLILFPKQLCVEDPCRRLASLWNFDCKLFDFQHNMFCGK FT FLLKVGDKFKFAPDPLKLMTKMGRKDIKDGALLSEIFVSIGDNYRAYRDYRIIEQLAPA FT VRERYRTGEDPTAALIALKKYIFSFELFAKAFNYYGNFVVSKVTRDFEW" FT CDS 5692..6666 FT /codon_start=1 FT /transl_table=1 FT /product="37-kDa movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:Q9JGK1" FT /protein_id="BAA94798.1" FT /translation="MTTKDVSSDSYEAAYNAMLDAQDATGLTADDVKNQRQRSFNVVNK FT YVEKALLQKDVATKMRDKWISFTKSNKEEGTPYNISYSCVMLNIIPTVPSTYGGTVEIS FT LIDSGLSLFNNVLPDQTQMMELGKGPQLMCFFMHYSIPINDEGRVIKLAFKIDCEMASP FT KMSVMNVYTYWTQRQGYLSLYSEPQRSTISKLVVGYDETLKLKTREDVRRFASRSLVLN FT NMKQHVPKMLPEQINLLKENVPLNRKESTVDLTKEEREKHEKLEQIRKQRAVATERSKK FT EMQQREAQLQAEQKRKETADKLEEKSKLKNQREHQKLDSENIV" XX SQ Sequence 7226 BP; 2111 A; 1206 C; 1874 G; 2035 T; 0 other; gtattacaaa aactctttca gtcgttagac tgcttaaaga aaaattgtta atacacttgc 60 tgtatatttg cgaggcacgc ttttgcgata aatcctcatc aaatttacag gacactatgc 120 cgatcgatag tagcaacatt ctcgggataa taaacgaaga ggaagtagtc agggcagcga 180 tagctactag cgctactcgg actaattctg aacttcatag aactgtttgt gaacagattc 240 gtgagcagtt cttggatact gtagaaaatc aaaaacaaaa aaagaaaata gatgtaagga 300 gggatctaac tcaggaacaa ttgcaaacat tgaatgagtt atatccggag agacatattg 360 ttacgagtgg ttgtgagaga ggtacgcaca gctttgctgc agcttcgagg aagattgaaa 420 cagatttgtt attgagtagg atgccgaaga atgccaatgt ttatgacatt ggtggtaatt 480 gggctactca tctgaaaaga aaagacactc ggaaagttca ttgttgttgt ccggtgctcg 540 attttcgtga cgcgcagcga aaaacaactc ggtggctttc ggtggagaaa ttcctgtcgg 600 agaaagatag catatctgaa cactgcgggc agaaggtgtt agagattcag gaagatgaag 660 atcggatctc aaacaacttg aggaaaggtg ctgtggctcc ggaagatttg actggtcgtt 720 ggtactgtga gaacaggttc gaagactgtg tgtacagggc ggagaaggct tatggtatgg 780 ctattcatag tatttatgat atatcccttg atgatttggt aaacgcaatg gaggagaaga 840 ggattaagta tctggtgggt actttccttt tctctgtcga actttttctt gggaaaaaac 900 ggggggaatt gacatctgtc gatggtttct ttgaaattga cggtggtaac gtcaaatatg 960 ggttttatga tgacacgaat tgcggttaca ggcacgatct gcagcagctg atggagtatt 1020 tgactaagac tttcgttaag gcgaaaggtg gttcagtctt ctatcttgag ttgactgagc 1080 agcgaggtga cgtaatgttc ttttcgctga ctgatgccac agaggctaga atgcatggcg 1140 ttgttgaaga cgaatcgttc aaatgtatac ctattgagag caaagacagt gtggtttttc 1200 ctttgtttga attgaacaag aaatctgacg agttggagtt cactgaagtc ttgttgccaa 1260 agtcttttgt gaggcgcact atagaatata cagctcgatt aaaaactaat cagttgaatc 1320 cagagacggt gaacagttac ctgacttcaa ccaataatac tgttattatt ggtggatctg 1380 caaaaaaaac tgttgaaaaa gttgatgcga tgcttatacc tcagattact acaactctga 1440 tcgtatggac tgaattgatg aatgcgaggc agaagaaagt gttagacagg ttgaggatcc 1500 aaatgaagga cgacgttggt ttcatggcgt tggctcacgc ttctttttcg aagatgttcg 1560 ggaaggtgag tttctatcag aaagcgttgc ggtcttatgc taattggatc tcttactgtc 1620 atggaacaga tgctatcgag tttaagaacg tgcccttgta cgttgaggtt aaagatcgcg 1680 ttaagatgtg gaaacaacac gcccctaatc acggtttctc ttttgatctg gaagacttgg 1740 atgagaagat acaattgtac aaggaaacag aaagagaaag gaaagcgata agcgagtttg 1800 ttgtttctga taaattgggc gatctttcag cggctgtgtg cgagaaggaa gcacgggagg 1860 tgtctgtaga gtatcgcgat cgtcgtcgga aagttgaggc tactgatttg cgaaatggtg 1920 aggtattcac caattttgtg gatgagtggt gcaacaagga agatcatttt aaccatgtgc 1980 atattgaagt tgaaaacaaa tattctcttt tggtcaagat tgtcatagcg gtttgggaag 2040 ctatagtacc acctatgcag tttgcaccag tttatattga tgatgaagaa agagatcctt 2100 cagatgctga aagcgtggta gagttggatc tttcagaaac cgatgatgga agtggtaagg 2160 gcgattacgc tgaaaaacct ggcagcgtgg agaaagctga gaaaccaatt gaagcgaggg 2220 tttctttaga gaaagggaaa gaaaaagtcg aggtggaaga ctcggcgatt cgacgcggta 2280 gtggttcatc gtcaccagac tcagaaacgt caatggagga tgagctggta agtgatggtg 2340 aatctctttt tgggagatcc tgtcaggcga ctatctattc gtccacaagt ttgtatggat 2400 caagcgaaga cgacacatct gtagggtccg catcttctga aatagattca agggtcttag 2460 aagctgtgga agctgccatt gacgagatgg aaaaggaagt gtcggcggaa gtcttagctg 2520 ctgtggtggt tgtgactgaa tctagcgaac ctgaagtttc tgaggtcgtg gttgaaaacg 2580 cggcgacagt cgaatgcaag gaacaggttg tagttgatac tacagactct gaaagtgatg 2640 aggagcgcgc gaaatcttgg ggttctatgg ctgaggaaga aagtgacgac accttctata 2700 tgaacacaat gcttatttcg aataaggtgc agagaagttc gttacctaag cagccagatt 2760 tcaacaagta taatacagtg cagcagaaag ctaaacagga gtatctgtgg tacttgcgat 2820 gcaagatgat ttctgacaga actactctta ggagtattat cgaagatcat ttgaatgggt 2880 tgtatcacaa tggaaactgc gatctaccga agaattcgtg ttttttggac tacactaaga 2940 gtgtcggagg ggagtggtta tatgctaaac cgctgaaggc cggtcattgt tacggtgttg 3000 gtttttctct gaattctaaa ggtaagattg gtaagtgtga actgctgaag ctgatgtggg 3060 acgttgatgc gagaggacag cctttggaaa ggccgtttaa cacaaagatg tttcaatttg 3120 tgttactgaa cgatctcact ttcctgatga acgaaatgat catattcagg aatcttcaag 3180 acactttgca gcgcaaggag cggactaagc aagcgagtat tgtactcaag gatggtgttc 3240 ctggatgcgg taagtcgacg tggatcttga acaatgctaa ctacattaag gatgtggtca 3300 tttcggtcgg taaggaggcg aaggaggatt tgaaagagaa gttcatgaaa aaatacaagt 3360 gcaccgagag tgagctaggt aggataagga ccgttgattc gtatttgatg catgattgcg 3420 gaaaaaaact gagggcaacc acagtgcatt tcgatgaagc tctgatgact cacgctggcg 3480 cagtgtattt ttgtgctgat ctacttgggg cgaggaaggt catctgccaa ggagattcgc 3540 agcagatacc ttttgtgaac agggtggagt ctatcaagtt gcaattcgca aaactggtca 3600 ttgacaagac ggatctcatc aggatgacct atcgatcgcc tatagacgta gcgcactacc 3660 ttaattataa gtcattctac acaggcggga gaattacaac taagaatgag gtggtgcgtt 3720 cgatgagcgt ggtcggtcca aggaatgtga gaccgatgac ttcggtgtat tccgtgccgt 3780 acgtgcctgg tgtgcagtac ttgactttta ctcaaactga gaaggatgat ctgtttaaag 3840 cattgaggtc aaaaggacat gttaatgtta acactgtgca tgagactcaa ggtaagactt 3900 ttgatgacgt cattctcgtc cgtttgaaaa ccacggaaaa cgagatatat ccaggtggac 3960 gcaactctaa accctacact attgtgggtc tgactagaca cagaaggtct ttggtctact 4020 acactgctat tgaggacagg ttattctttg atctcacaga aatgcgtggt gtgatggaag 4080 acaagctgtt gaagaatctt aacgtggaga acgggaaatg acggtttggg tcgaagtatg 4140 aatcaatttt gacctgtgac cgtgaagtaa aagttcctga tactggtgat ttagtcacca 4200 ttcaggattt ttatgatcgg gtttttccag gtaattcaac ggtggattct tacttcgacg 4260 ggtatgaggt tgcgacaact gatatcagta ttgaagtcga aaactgcacc gttcatacga 4320 ataagaatac taaggtttgg caggagaaac agggtctagt acctgttatg cggactgcta 4380 tgcctgaaaa aaggcagaat ggtatggttg agtcactgct ggcgctgaag aagagaaaca 4440 tggctgcacc caaactgcag gaggcagtta atgagtttga ggtgatcgaa cacacgattg 4500 atcgtgcgag aactatattt ctgaatgaag atctgattga cactacaccg gcatccactg 4560 ttgaatctaa tatgcgatgg tgggaaaagc aatcgtatac tgcaaggaag cagctgctga 4620 gtgagacgaa gatacttcat gagatagatg tatgcacata taatttcatg atcaagaatg 4680 atgtgaaacc gaaaatggat ttgacacctc agtctgagta cgcggccctg caaaccgttg 4740 tatatccaga caagattgta aacgctcttt ttgggcctgt gatgaaggag atcaacgaaa 4800 ggattcgtta tgctcttaag ccgcatgtag tttacaattc tcgaatgaat gctgaagaac 4860 tgaaccggac tgttgaattt cttgacccgg aggaagagta ccagtctttt gagattgatt 4920 tctcgaaatt tgataaatcc aagacttcgt tgcatattcg aactgtgatc gaattctaca 4980 aactttttgg cttagaggag atgttggctt ttttgtggga gaaatcgcaa tgtcagacca 5040 ctgtgaaaga tcgtcttaat ggtataacgg catatttgtt ataccaacaa aagtctggca 5100 attgtgatac ctacggctcg aacacttggt cggcagcatt ggctttgttg gaaactatgc 5160 cattggagaa ggccaagttc atgatttttg ggggagatga ttcactcatc ttattcccaa 5220 agcagctttg tgtcgaagat ccatgcagga ggttagcatc actgtggaat tttgattgta 5280 agttgtttga ttttcagcac aacatgttct gtggaaaatt tttgctgaaa gtcggagata 5340 agttcaaatt tgcacctgat cctttgaagt tgatgactaa aatggggcgc aaagatataa 5400 aagatggagc gttgctttct gagattttcg tatccattgg agacaattac agggcatacc 5460 gcgattatag gattattgag cagctcgctc ccgctgtgcg agagcgatac aggactggtg 5520 aggaccctac tgctgctctg attgcattga agaaatacat cttcagtttt gagttgttcg 5580 ctaaagcgtt taattattat ggtaattttg tggtgagtaa ggtgactaga gactttgaat 5640 ggtaatcgag gtctgtgttg tttttcttac tcagtgctta ttttattaaa catgacaact 5700 aaagatgttt caagtgattc ctatgaggcg gcgtacaatg ctatgttgga tgcgcaggat 5760 gcaactggtc tgactgctga tgatgtaaaa aatcagagac agaggagttt caatgttgtg 5820 aataagtatg tggagaaggc actacttcag aaagatgtgg cgacaaagat gagagacaag 5880 tggatcagtt ttactaagag caataaagag gaaggcactc cctacaatat ttcttacagt 5940 tgtgtgatgc tgaacatcat accgactgtg ccaagtacct acggtggtac cgtagagatt 6000 tctctgatcg attctggcct gtcactgttt aataacgtgt tgcctgatca aactcagatg 6060 atggagttag gtaaggggcc tcagcttatg tgtttcttta tgcattatag cataccgatc 6120 aacgacgagg gtagggtgat taagttggcg ttcaagattg attgtgagat ggcttcacca 6180 aaaatgagtg tgatgaatgt ttacacttac tggacgcaac gtcaaggtta cctttcactg 6240 tattcggaac cacagcgttc tactatttcg aagttagtcg ttggttacga tgaaactttg 6300 aaattgaaaa cgcgtgaaga cgtgcgacgt tttgcgtcac ggtctttggt tctgaataac 6360 atgaagcagc atgttccgaa gatgctccct gaacaaatca atttgctcaa ggagaacgtt 6420 ccactaaacc gtaaggaatc tactgtagat cttactaagg aggagcgtga aaaacatgag 6480 aagttggaac agattcgaaa acaaagagct gtggcgactg agcgcagtaa gaaggagatg 6540 caacagcgtg aagctcagtt gcaagccgaa cagaagcgca aggagactgc tgataagtta 6600 gaggagaaat cgaaactgaa gaatcagcgt gagcatcaga agttggactc tgaaaacata 6660 gtgtgattat tactattata ctttgtatat tgtctatata tatatggtgt atgtgtgtat 6720 atgtttatat gtattggtta ttgttggata atctatattc taagctttgc atgtgtcata 6780 cattttgagt ggtactattt tcgtatgtcg gtttgtatac atattgtatt attaccttgc 6840 atatgttcta cctttgagtg gtactttttc gcacgtaaaa tgcaaaattt agtctagtgt 6900 actgggcaga agtacaccgt tgttgatacg ataatcaacg ctgatggtaa atcagattct 6960 atttaccgga agatattcat tcttctcaaa aaagaacgtg gtcttcacga tagaagatgg 7020 tgcttgttag ttcacctaaa tcgaactaac gacggggcgt tccgcagtac gtttaaactg 7080 cgggctttcc tctagtttct actgatgtaa tttaaaaaag atcggtattt gactatgatg 7140 aggagcgact aggggtcgcg gttgctaaga cacagcaatc aagaggggtg caaatccccc 7200 cctgaaccgg agggttatcc ggccca 7226 //