ID AB030941; SV 1; linear; genomic RNA; STD; VRL; 3384 BP. XX AC AB030941; XX DT 18-FEB-2000 (Rel. 62, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Apple latent spherical virus RNA2 for 108K polyprotein, complete cds. XX KW . XX OS Apple latent spherical virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Cheravirus. XX RN [1] RP 1-3384 RA Yoshikawa N., Li C.; RT ; RL Submitted (09-AUG-1999) to the INSDC. RL Nobuyuki Yoshikawa, Iwate University, Faculty of Agriculture; Ueda 3-18-8, RL Morioka, Iwate 020-8550, Japan (E-mail:yoshikawa@iwate-u.ac.jp, RL Tel:81-19-621-6150) XX RN [2] RX PUBMED; 10644854. RA Li C., Yoshikawa N., Takahashi T., Ito T., Yoshida K., Koganezawa H.; RT "Nucleotide sequence and genome organization of apple latent spherical RT virus: a new virus classified into the family Comoviridae"; RL J. Gen. Virol. 81(Pt 2):541-547(2000). XX DR MD5; a50e8cc17ae5db9359eb6924b9b8c5ab. DR EuropePMC; PMC3123315; 21658286. XX FH Key Location/Qualifiers FH FT source 1..3384 FT /organism="Apple latent spherical virus" FT /segment="2" FT /mol_type="genomic RNA" FT /db_xref="taxon:101688" FT CDS 312..3197 FT /codon_start=1 FT /product="108K polyprotein" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9JGP1" FT /protein_id="BAA90830.1" FT /translation="MAFEPIREQLAPEEVPDSFRVETPAAMLARLRAEAAVKRAAAAKA FT KMPYSDDLMVGSELTYLAKDDVFGPGVGALKRLFSRPSAEESVVVTHPLSVKDQVVRYQ FT RPRTDHDPFVAVYTPLPHITEEQARKLMEKGFSNSSNVALDMSVQSHVGQGTPLLAMCG FT IMDSRTDDPNEALQVAGYFDLGRDKCDLISLPLINFPLNKEDFDDYMRGLYLCTMFHNV FT RGFQNNKALCSYSAVGFDQHKETPRCIRSRVKQSWEDILARNNESEYTRVQSGQNLLNA FT IEKDRNEAIPDVGEHQFSCIPPHTGTPVTSLLTSDGVLKRPNFTLPRSASTRFTMPLNM FT RYSGRNSVENARHSLSYQSKDTSSLHRSDPNLLEGQGPDFTKIIWPTVVERNFSNPQSE FT ITTTLQELYGDTFETVSICPPQSYGGELLKGKIFFSSTPEFTREDLVEGKILASFKLDE FT VLSGLGMGAMLMTQIMSGHATIRVSAKVMLSKFCSFALKLVYDELMQLNSDTTDFGKIS FT VLPGAIFSTQEEEFSFDFELFSPGVHLKFDNNKLLGKVHLAALSAPNLTENMPESFSCT FT FNFSIVDVKTTFYNIGQGACLSIPNFPVHITGKTQQLHVGPKPSIARFSFNPFDLGTVF FT NRFQSLCAHLEGYSGDLIVNWLVTCSALTNARLYIIPVYDNYSFEKFSEEKLIQCKYEF FT KQISLVRKGTVHIPFVNWFGSYSRTRFPKLLFYFPNGVSGPSGEKIHVTVQLDRILNFS FT GLGHRLFKEIGPLVGEGSDPFSFLLNYSHCGTLVESSLNKGGMWCVPVSPVNLAAYTLQ FT GEALVFNDAFVSKTHNWLHFMASTTAYWRGTLHYQMRVTYKDRNAACRNLVAFYTTNNE FT SLFGFNNKPVGDTGISSVMGDSFSVDITVPFLIPTCYLQTIRGKFDYLNSCNGCIYFHL FT PTKSATSVQLWVRPGQDFDFARFRLLKAGYT" XX SQ Sequence 3384 BP; 824 A; 735 C; 692 G; 1133 T; 0 other; tcgttttaga gtttatgaga actgtgcgtt gtttgtttca agttcctttt gttctgtttc 60 ttgccatcat ctcacctttt ctcatatcct ctaccgataa acacccaatc ctttcttctt 120 taaacaatct ttgtattgtt ttcttatttt ttatattttc ttatcttgat actcatctct 180 cgggtatcct ctttgacctt cgcaagaagg ccatctttga tcgcttggat cgttaccaag 240 ccatccctct tcctcctcca ttgccaatct tggcaatttc tgttttccct ctttcctccc 300 cttcttctca aatggctttt gagccaatta gggagcaatt agctcccgag gaagtcccgg 360 actctttccg ggtggagacg cccgcggcta tgctggcgcg tctccgtgct gaagcagccg 420 ttaagagggc tgctgctgct aaggcaaaaa tgccttacag cgatgacttg atggtgggct 480 ctgagctcac ctacttggcc aaggatgatg tctttggtcc aggagtgggc gcacttaagc 540 gcctcttcag caggccttct gctgaagaat ctgtggtggt aacccacccc ttgtccgtca 600 aggatcaagt ggtgcgctac cagcggcctc gtacagacca tgatcctttc gtggctgtgt 660 acaccccact cccccatatc accgaggagc aagctcggaa actcatggaa aagggctttt 720 ccaattcttc aaatgtagcc cttgacatgt ctgttcaaag ccatgttgga caaggtaccc 780 cattacttgc tatgtgtggt atcatggact ctcgcaccga tgaccccaat gaagccttgc 840 aagttgcagg ctattttgat cttgggcgag ataaatgtga tctcatctcc ttaccgctaa 900 tcaattttcc tttgaataaa gaggattttg atgattatat gcgaggtttg tatctttgca 960 caatgtttca caatgtgcga ggatttcaaa acaacaaagc tctctgtagt tattctgcag 1020 tgggctttga tcagcataag gagactccac gttgcatccg atctagagtc aaacaatcct 1080 gggaagatat attggccaga aacaacgaaa gtgaatacac tagagttcaa tctggtcaga 1140 atcttcttaa tgctattgag aaagatcgga atgaagcaat tcctgatgtt ggggagcatc 1200 agttttcttg cataccacct catacaggta caccggtaac ttcattgtta acttctgatg 1260 gtgtcctcaa gaggccaaac ttcactcttc caagaagtgc ttccactcgt tttactatgc 1320 cactgaacat gcgttactca ggacgcaatt cagttgaaaa tgcgaggcac tccttatcct 1380 atcaatccaa agatacttct agtttgcata gatctgaccc aaatctgcta gaaggtcagg 1440 gccctgattt cacaaagatt atctggccca cggtcgtgga acgaaacttt tctaatccac 1500 agagtgaaat cacgaccacc ttgcaagagt tatatggaga cacttttgag actgtttcca 1560 tttgccctcc ccaatcttat gggggagaac tcttgaaagg gaaaattttc ttttcttcta 1620 ctccagaatt taccagggag gaccttgttg aagggaaaat ccttgcttcc tttaagcttg 1680 atgaggtttt atcaggcttg ggaatgggag ctatgctgat gacgcagatc atgagtggtc 1740 atgctaccat tcgagtatct gctaaagtta tgctcagtaa gttttgtagt tttgctttaa 1800 aacttgtgta tgatgaactc atgcaattga attctgacac cactgatttc ggtaagatca 1860 gtgttcttcc tggagcaatt tttagcacac aagaagaaga gttttctttt gattttgaat 1920 tgttttcacc tggtgttcat cttaagtttg ataacaacaa gcttttgggg aaagttcacc 1980 tggcagctct cagtgctccc aatttgacag agaatatgcc tgagagtttt tcttgtacat 2040 ttaatttctc tattgtagat gtaaaaacta cattctataa tataggacag ggtgcttgtt 2100 tgagtatacc caattttcct gtacatataa cgggcaaaac tcaacagtta catgtggggc 2160 caaaaccttc tatagcccgg ttctctttta atccttttga tttaggaacc gtgtttaata 2220 ggtttcagtc cttgtgtgct catcttgagg gctactcagg tgatttaatt gtaaattggc 2280 tcgtcacctg ttcagctcta actaacgcaa gattgtatat aatacctgtg tacgataatt 2340 actcttttga gaagttttct gaggagaaac tgattcaatg taaatatgaa tttaaacaaa 2400 tcagtttagt gcgtaaagga actgtgcata ttccttttgt gaattggttt ggttcctatt 2460 ctcgcactcg ctttcctaag cttctctttt attttcctaa cggtgtatct ggaccttcag 2520 gggaaaaaat acacgttact gtgcagttag atagaatttt aaacttttca ggcttgggac 2580 accgtctatt caaggaaatt ggtcctttag taggcgaggg ttctgaccct ttttcttttc 2640 ttctcaatta tagtcattgt ggaactctcg ttgagagttc tctaaataag ggaggcatgt 2700 ggtgtgtacc tgtttcccct gtaaatcttg ccgcttacac actccaagga gaggcgctag 2760 tctttaatga tgcttttgtg tctaaaacgc acaactggct tcattttatg gctagtacaa 2820 cagcctattg gcgtggtacc ttgcattatc aaatgcgagt tacttacaaa gataggaatg 2880 cagcctgtcg caaccttgtg gctttttata ctactaataa tgaatctctt tttggtttca 2940 ataacaagcc agttggcgac actggcatat cttctgttat gggagattcc ttctctgtag 3000 atattacagt tccttttctt attcccacgt gctatttgca aacaatacgt gggaagtttg 3060 attacctaaa tagttgcaat ggttgtattt atttccattt accaactaag agtgccactt 3120 cagtgcaact ctgggtcagg ccaggtcagg attttgactt tgccaggttc agattgctca 3180 aagctggtta cacctagttt ggtctttctg ctatctttga gtccttttct ttttctcttt 3240 cttttgaact agtttgatct cgtgacctct ggtccgttag gtttcttgct ggctcttcct 3300 aagatgagat cttgaaccag cctagttctt ttgttgcttt tgcttttgct ttagtgtgct 3360 caaaaatgtc ggatagtcca atcc 3384 //