ID AB022765; SV 1; linear; mRNA; STD; VRL; 3302 BP. XX AC AB022765; XX DT 05-OCT-1999 (Rel. 61, Created) DT 19-AUG-2006 (Rel. 88, Last updated, Version 2) XX DE Human rotavirus A mRNA for VP1, complete cds. XX KW . XX OS Human rotavirus A OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. XX RN [1] RP 1-3302 RA Taniguchi K.; RT ; RL Submitted (24-JAN-1999) to the INSDC. RL Koki Taniguchi, Fujita Health University, School of Medicine; Department of RL Virology and Parasitology, Toyoake, Aichi 470-1192, Japan RL (E-mail:kokitani@fujita-hu.ac.jp, Tel:81-562-97-2467, Fax:81-562-97-4008) XX RN [2] RA Taniguchi K.; RT "Rotavirus"; RL Unpublished. XX DR MD5; f1c90780e6e2f1b9db022effef6e6480. DR EuropePMC; PMC136853; 12414921. DR EuropePMC; PMC1925260; 17059839. DR EuropePMC; PMC2573243; 18786998. DR EuropePMC; PMC344525; 14766865. XX FH Key Location/Qualifiers FH FT source 1..3302 FT /organism="Human rotavirus A" FT /strain="KU" FT /mol_type="mRNA" FT /db_xref="taxon:10941" FT CDS 19..3285 FT /codon_start=1 FT /transl_table=1 FT /gene="VP1" FT /product="VP1" FT /db_xref="GOA:Q9QNB3" FT /db_xref="InterPro:IPR001795" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR022071" FT /db_xref="InterPro:IPR042032" FT /db_xref="UniProtKB/Swiss-Prot:Q9QNB3" FT /protein_id="BAA84962.1" FT /translation="MGKYNLILSEYLSFVYNSQSAVQIPIYYSSNSELETRCIEFHAKC FT VDNSKKGLSLKPLFEEYKDVTDNATLLSILSYSYDKYNAVERKLVSYAKGKPLEADLTA FT NELDYENNKITSELFQSAEEYTDSLMDPAILTSLSSNLNAVMFWLERHSNDIADANKIY FT KRRLDLFTIVASTINKYGVPRHNEKYRYEYEVMKDKPYYLVTWANSSIEMLMSVFSHED FT YLIAKELIVLSYSNRSTLAKLVSSPMSILVALIDINGTFITNEELELEFSDKYVKAIVP FT DQTFDELQEMINNMKKIGLVDIPRMIQEWLIDCSLEKFTLMSKIYSWSFHVGFRKQKMI FT DAALDQLKTEYTKDVDDEMYNEYTMLIRDEIVKMLEIPVKHDDHLLRDSELAGLLSMSS FT ASNGESRQIKFGRKTIFSTKKNMHVMDDIAHGKYTPGVIPPVNVDKPIPLGRRDVPGRR FT TRIIFILPYEYFIAQHAVVEKMLLYAKHTREYAEFYSQSNQLLSYGDVTRFLSSNSMVL FT YTDVSQWDSSQHNTQPFRKGIIMGLDMLSNMTNDPKVVQALNLYKQTQINLMDSYVQIP FT DGNVIKKNQYGAVASGEKQTKAANSIANLALIKTVLSRIANKYSFITKIIRVSGDDNYA FT VLQFNTDLTKQMIQDVSNDVRYIYFRMNAKVKALVSTVGIEIAKRYLAGGKIFFRAGIN FT LLNNEKRGQSTQWDQAAILYSNYIVNKLRGFETDREFILTKIIQMTSVAITGSLRLFPS FT ERVLTTNSTFKVFDSEDFIIEYGTTDDEVYIQRAFMSLSSQKSGIADEIASSQTFKNYV FT SKLSDQLLVSKNVIVSKGIAVTEKAKLNSYAPIYLEKRRAQISALLTMLQKPVSFKSNK FT NTINEILRDIKPFFVTTEDNLPIQYRKFMPTLPDNVQYVIQCIGSRTYQIEDSGSKSSI FT SKLISKYSVYKPSIEELYKVISLREQEIQLYLVSLGVPLVDASAYVASRIYSQDKYKIL FT ESYVYNLLSINYGCYQLFDFNSPDLEKLIRIPFKGKIPAVTFILHLYAKLEIINYAIKN FT RAWISVFCNYPKSEMIKLWKKMWSITALRSPYTSANFFQD" XX SQ Sequence 3302 BP; 1237 A; 476 C; 566 G; 1023 T; 0 other; ggctattaaa gctgtacaat ggggaagtac aatctaattt tgtcagaata tttatcattc 60 gtttataatt cacaatctgc agttcaaata ccaatctatt attcttccaa ttctgaatta 120 gaaacgagat gcattgaatt tcatgccaaa tgtgttgata attcaaagaa agggttatca 180 ttaaaaccat tatttgagga atataaagat gtaacagata atgcgacttt attatccata 240 ttatcatatt cgtatgataa atataatgct gtagagcgga aattagttag ttatgctaaa 300 ggtaaaccac ttgaagctga tttaacagca aacgaacttg attatgaaaa taataaaata 360 acttctgaac tatttcagtc agccgaagaa tacactgatt cattaatgga tcccgccata 420 ttgacttcac tatcttcaaa tttaaatgca gttatgtttt ggctagaacg acattcaaac 480 gatattgctg atgcaaataa aatttataaa cgcagattag atttatttac tatagtagca 540 tctacaataa ataaatatgg ggtaccgaga cataatgaga aatacagata cgaatatgaa 600 gtaatgaaag ataaaccata ctatttagtg acttgggcta attcgtccat agaaatgctt 660 atgtcagtat tttcacatga agattatcta atagcaaaag aattgattgt tttatcatat 720 tcaaataggt cgacattagc taaattggtt tcatctccaa tgtctatatt agttgcattg 780 atagatatta atggtacatt cattacgaat gaagagttag agcttgaatt ttcagataaa 840 tatgttaaag caattgtacc tgatcagact ttcgatgaat tgcaagagat gattaataat 900 atgaaaaaaa ttggtttagt agatattcct aggatgatcc aagaatggtt aatcgattgc 960 tcattagaga aattcacgct gatgtcaaaa atttactctt ggtcattcca tgttggattt 1020 agaaagcaga aaatgattga tgcggcgtta gaccaattga agacggaata tactaaggat 1080 gtggatgatg aaatgtacaa tgaatacact atgttaatta gagatgaaat agtgaaaatg 1140 ttagaaattc cagttaaaca tgatgatcat ctacttcgtg attcagaact agctggattg 1200 ttatcaatgt catcagcttc aaatggtgaa tcaagacaaa tcaaatttgg tcgcaaaaca 1260 atattttcaa ctaagaagaa tatgcatgtg atggatgata tagcacatgg aaagtatact 1320 ccaggtgtta ttcctccagt gaacgtagat aaaccaattc cactaggtcg tagagatgtt 1380 cctggaaggc gtacgagaat tatattcata cttccatatg agtattttat tgcacaacat 1440 gctgtggtag aaaagatgct attgtatgca aaacatacta gagaatatgc ggaattctat 1500 tcacagtcaa atcaattgtt atcatacggt gatgttacga gatttttgtc cagtaactct 1560 atggttttat atacagacgt ttcacaatgg gactcgtcgc agcataacac acagccattc 1620 aggaagggaa taattatggg tctagacatg ctatctaata tgactaacga tccaaaggta 1680 gtacaagcat tgaatttata taagcaaaca caaattaacc ttatggattc atacgttcag 1740 ataccagatg gtaacgtaat caaaaagaac cagtacggag ctgtcgcttc aggagaaaaa 1800 caaactaaag cagctaattc catagctaac ttagccctta ttaaaacagt actatcaagg 1860 attgcaaata aatactcttt tataactaaa ataattagag taagtggtga tgacaattat 1920 gcagtattac aatttaatac tgacctcaca aaacagatga ttcaagatgt gtctaatgac 1980 gtgagatata tatattttag aatgaatgca aaagttaaag cactagtgtc gacagttggt 2040 attgaaatag caaaaagata cttagctgga ggaaaaatat tctttagagc tggcataaat 2100 ttattaaata atgaaaaacg tgggcagagt acgcaatggg atcaagcagc tattctatat 2160 tcaaattaca ttgttaacaa attacgagga tttgagactg atagagaatt tatattaact 2220 aaaattatac aaatgacttc cgtagccatc actggatcgc taaggttatt tccatcagaa 2280 cgagtattaa ctaccaattc aacgttcaaa gtatttgatt cagaagattt cattatagaa 2340 tatggaacaa ctgatgatga agtgtatata caaagagcat tcatgtcatt gtctagtcag 2400 aaatcgggaa tagctgatga aattgcctct tcgcaaacat ttaaaaatta tgttagtaaa 2460 ttatctgatc aattattagt atcaaaaaat gtaattgtat ctaaaggtat agcagtaacg 2520 gagaaggcta aattgaattc atacgcgcca atatatttag aaaaacgtcg tgcgcaaata 2580 tcagcgttat taaccatgtt gcagaaacca gtgtcattta aatcaaataa aaatactatt 2640 aatgaaattt tacgtgatat aaaaccattc tttgtcacta ctgaagataa tttaccaatt 2700 caatatagaa aatttatgcc tacattgcca gataatgttc aatacgtcat acaatgtata 2760 ggatcaagga catatcaaat agaagatagc ggatcgaaat cgtcaatttc aaagttaata 2820 tcaaaatatt cagtttataa accatcaatt gaagagttgt acaaagttat atctctaaga 2880 gaacaagaaa tacaattgta tttggtgtca ttaggagttc cattagttga tgcgagtgca 2940 tatgtagcat caaggatata ttcacaagat aaatataaaa tattagaatc ttatgtatat 3000 aacttactat caattaatta tggatgctat caattattcg atttcaactc tccagatcta 3060 gaaaagctta tacgaattcc ttttaaaggc aaaataccag ctgtaacgtt catattgcat 3120 ctttatgcta agttagaaat aataaattat gctataaaga atagagcttg gattagtgta 3180 ttctgtaatt atccaaaatc tgagatgatt aagttatgga agaaaatgtg gagcataaca 3240 gcactacgat cgccctatac tagtgcgaat ttctttcaag attagaacgc ttagatgtga 3300 cc 3302 //