ID AB010145; SV 1; linear; genomic RNA; STD; VRL; 8251 BP. XX AC AB010145; XX DT 09-JUL-1998 (Rel. 56, Created) DT 03-DEC-2008 (Rel. 98, Last updated, Version 7) XX DE Aichi virus genomic RNA, complete genome. XX KW . XX OS Aichivirus A OC Viruses; Riboviria; Picornavirales; Picornaviridae; Kobuvirus. XX RN [1] RP 1-8251 RA Yamashita T., Takeda N.; RT ; RL Submitted (07-JAN-1998) to the INSDC. RL Contact:Teruo Yamashita Aichi Prefectural Institute of Public Health, RL Department of Virology; Nagare 7-6, Tsujimachi, Kita-ku, Nagoya, Aichi 462, RL Japan XX RN [2] RX PUBMED; 9733894. RA Yamashita T., Sakae K., Tsuzuki H., Suzuki Y., Ishikawa N., Takeda N., RA Miyamura T., Yamazaki S.; RT "Complete nucleotide sequence and genetic organization of Aichi virus, a RT distinct member of the Picornaviridae associated with acute gastroenteritis RT in humans"; RL J. Virol. 72(10):8408-8412(1998). XX DR MD5; 09458c3875ea68ece9341f304ebf4480. DR EuropePMC; PMC1081250; 15750090. DR EuropePMC; PMC110230; 9733894. DR EuropePMC; PMC114071; 11160660. DR EuropePMC; PMC115046; 11483747. DR EuropePMC; PMC1317472; 16332886. DR EuropePMC; PMC137002; 12163611. DR EuropePMC; PMC2292896; 18256215. DR EuropePMC; PMC2446501; 18469125. DR EuropePMC; PMC2675228; 19233955. DR EuropePMC; PMC2866408; 19861087. DR EuropePMC; PMC2893485; 20418428. DR EuropePMC; PMC3168422; 21819561. DR EuropePMC; PMC3194941; 21880761. DR EuropePMC; PMC3230369; 21873976. DR EuropePMC; PMC3264332; 22114340. DR EuropePMC; PMC3739534; 23876456. DR EuropePMC; PMC4635496; 26018961. DR EuropePMC; PMC5511752; 14596594. DR EuropePMC; PMC87158; 10921958. XX FH Key Location/Qualifiers FH FT source 1..8251 FT /organism="Aichivirus A" FT /host="Homo sapiens" FT /isolate="A846/88" FT /mol_type="genomic RNA" FT /db_xref="taxon:72149" FT CDS 713..8014 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:O91464" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="PDB:5GKA" FT /db_xref="PDB:5LVC" FT /db_xref="PDB:5LZ3" FT /db_xref="UniProtKB/TrEMBL:O91464" FT /protein_id="BAA31356.1" FT /translation="MAATRVSRSVLAAVAHSAAHRTYHTVLDCYDRLYLNTNPHLSYPL FT PKNSSFPCPFCQYDEQNEVLSPESLCGEGAEPCWKCSQDKPRRKYNTTPPEDWLYDSDV FT QSWFYPETYYSDLQQKFFDKLALLSLPGAYQAKTPEERALAGALTQLLNFPSTPPLTLP FT TTNLQRQGNSVTNIYGNGNNVNTDVGANGWAPTVSTGLGDGPVSCTPPTPSPGDTEVPP FT PRKPTTFPAPPTKSGSRFSKWWEPAAARASESATDSAIEGIDAAGKAASKAITRKLDRP FT AAPSSTANPQPSLIALNPSATQSGNASILTGSTAPSLLAYPTATPVPLPNPDEPSQPGP FT SGDRTWLLDTVTWSQEFTRGWNIAGSNGMQWTGLESLIFPVSTDTNWTSTSSPTAYPLP FT FSFVRAYPDSSWAAMYNTHSMWNCGWRVQVTVNGSQFHAGALILYMVPEATTHAIQTAR FT DNAGFVFPYVILNLYESNTATIEVPYISPTPNTSSGLHAPWTFYLQVLSPLNPPPSLPT FT SLSCSIYVTPVDSSFHGLRYLAPQHWKTRAVPGAGTFGSAVAGQELPLCGVRAYYPPNA FT YIPAQVRDWLEFAHRPGLMATVPWTMADEPAERLGIFPVSPSAIAGTGAPISYVISLFS FT QWRGELAAHLLFTGSAQHYGRLVVCYTPAAPQPPSTMQEAMRGTYTVWDVNAASTLEFT FT IPFISNSYWKTVDVNNPDALLSTTGYVSIWVQNPLVGPHTAPASALVQAFISAGESFNV FT RLMQNPALTSQTLTEDLDAPQDTGNIENGAADNSPQPRTTFDYTGNPLPPDTKLENFFS FT FYRLLPMGGSGAPSLSFPADEGTIIPLDPINWLKGADVSGIAAMLSCFTYIAADLRITL FT RFSNPNDNPATMLVAFAPPGATIPLKPTRQMLSNFYMAEVPVSAATSTMVSFSIPYTSP FT LSAIPTSYFGWEDWSGTNFGQLSSGSWGNLMLIPSLSVDSAIPFDFQLSCWVAFGNFKA FT WVPRPPPPLPPLPTPAANAERTVAVIKQGAASATPDVDPDDRVYIVRAQRPTYVHWAIR FT KVAPDGSAKQISLSRSGIQALVALEPPEGEPYLEILPSHWTLAELQLGNKWEYSATNNC FT THFVSSITGESLPNTGFSLALGIGALTAIAASAAVAVKALPGIRRQGLLTLSADTETNQ FT TLNKITGSVNQAAQVVSQFDLSGPANSVSLAASDIREAAHKVASSLNGFTDVIADIKDS FT LFTRVSDAVESGVATFLTWLVKLFGYLLVLFGSPTPMSISGLLVIICADLAPHAREFFT FT ASGNVLSSLYYWIASKLGLSVTPQECERATLEPQGLKDFNDGALAMRNVEWIGETAWKW FT AHRLLDWIPGKAKTDPQAKLADVHDEIMLHYSDSILALGSEKLPIDHITKSISRCRELV FT SIAQEAKSGPHSSFLNQAVKNYTLAISQHRKCQTGPRPEPVVVYLYGPPGTGKSLLASL FT LAQTLSQRLAGTPDDVYSPSSASCEYFDGYTGQTVHFIDDIGQDPEGRDWANFPNLVSS FT APFIVPMASLEEKGTHYTSKVIVVTSNFHEPNERAARSMGALRRRVHLRINVTSNGVPF FT DPTNALNPIPGTQSKYFTAQTPLTLFQSNTVRLDRDSIWTPTFTNMDELVDAIVTRLDR FT STGVSNSLASLIRRQGNRVIDAEPREIPLEYADDLLEAMAHHRPVPCSLGLSQAIANNT FT PIQQISETFWKYRKPIFTCTTFLAVLGFLCSVIPLARSLWKSKQDTPQEPQAAYSAISH FT QKPKPKSQKPVPTRHIQRQGISPAVPGISNNVVHVESGNGLNKNVMSGFYIFSRFLLVP FT THLREPHHTTLTVGADTYDWATLQTQEFGEITIVHTPTSRQYKDMRRFIGAHPHPTGLL FT VSQFKAAPLYVRISDNRILDLDFPGVVVCKQAYGYRAATFEGLCGSPLVTDDPSGVKIL FT GLHVAGVAGTSGFSAPIHPILGQITQFATTQQSLIVPTAEVRPGVNVNRMSRLHPSPAY FT GAFPVKKQPAPLKRNDKRLQEGVDLDTQLFLKHGKGDVTGPWPGLEAAADLYFSTFPTS FT LPVLTQEQAIHGTPNMEGLDMGQAAGYPWNTLGRSRRSLFDEVEPGVFVPKPELQAEIN FT QTLEDPDYVYSTFLKDELRPTAKVEQGLTRIVEAAPIHAIVAGRMLLGGLIDYMQGRPG FT EHGSAVGCNPDVHWTSFFYAFSEFSQVYDLDYKCFDATLPSAVFTLVADHLTRITGDPR FT VGRYIHSIRHSHHIYGNRMYDMIGGNPSGCVATSILNTIINNICVLSALIQHPDFSPSR FT FHILAYGDDVIYATEPPIHPSFLREFYQKHTPLVVTPANKGQDFPPTSTIYEVTFLKRW FT FVPDDVRPIYIHPVMDPDTYEQSVMWLRDGDFQDVVTSLCHLAFHSGPKTYAAWCMKVR FT EQCLKSGFAPNFLPYSYLQLRWLNLLAA" FT mat_peptide 1223..2332 FT /product="VP0" FT mat_peptide 2333..3004 FT /product="VP3" FT mat_peptide 3005..3838 FT /product="VP1" FT mat_peptide 3839..4171 FT /product="2A" FT mat_peptide 4172..4666 FT /product="2B" FT mat_peptide 4667..5671 FT /product="2C" FT mat_peptide 5672..5956 FT /product="3A" FT mat_peptide 5957..6037 FT /product="3B" FT mat_peptide 6038..6607 FT /product="3C" FT mat_peptide 6608..8011 FT /product="3D" XX SQ Sequence 8251 BP; 1608 A; 3116 C; 1744 G; 1783 T; 0 other; tcaccctctt tcccggtggt ctggtcccgg accaccgtta ctccattcag cttcttcgga 60 acctgttcgg aggaattaaa cgggcaccca tactcccccc accccccttt ggtaactaag 120 tatgtgtgct cgtgatcttg gctcccacgg agcggaccga tccgttggtg aacaaacagc 180 taggtccaca tcctcccttc ccctgggagg gcccccgccc tcccacatcc tccccccagc 240 ctgacgtatc acaggctgtg tgaagccccc gcgaaagctg ctcacgtggc aattgtgggt 300 ccccccttca tcaagacacc aggtctttcc tccttaaggc tagccccggc gtgtgaattc 360 acgttgggca actagtggtg tcactgtgcg ctcccaatct cggccgcgga gtgctgttcc 420 ccaagccaaa cccctggccc ttcactatgt gcctggcaag catatctgag aaggtgttcc 480 gctgtggctg ccaacctggt aacaggtgcc ccagtgtgcg taaccttctt ccgtctccgg 540 acggtagtga ttggttaaga tttggtgtaa ggttcatgtg ccaacgccct gtgcgggatg 600 aaacctctac tgccctagga atgccaggca ggtaccccac ctccgggtgg gatctgagcc 660 tgggctaatt gtctacgggt agtttcattt ccaatccttt tatgtcggag tcatggctgc 720 aacacgggtt tcacgatctg tgctcgctgc tgtggctcac tctgccgctc accgcaccta 780 ccacactgtc cttgactgct atgataggct ttacctcaac accaaccccc atctctctta 840 tccccttccc aaaaactctt ccttcccttg cccgttctgt cagtacgacg agcagaatga 900 ggtcctctcc ccagagtctc tctgtggcga gggagctgaa ccctgctgga agtgctcaca 960 ggacaaaccc cgccgcaagt acaacaccac ccctcctgaa gactggctct atgattctga 1020 tgtccaatcc tggttctatc ctgaaacata ctactctgac cttcagcaaa agttctttga 1080 caaattggct ctcctctctc ttccaggtgc ctaccaagca aagaccccgg aggagcgtgc 1140 cctcgcgggc gcgctcaccc aactcctcaa cttcccctcc accccccctc tcacactccc 1200 taccactaac ctccaacggc aaggcaactc ggtcaccaac atctacggta acggcaacaa 1260 cgtcaacact gacgttggcg ccaacggttg ggcccccacg gtctcaactg gcctaggtga 1320 tggtcccgtc tcatgcactc cgccgactcc ctccccgggc gatacggagg tgcctcctcc 1380 gagaaaaccc acaacgtttc cggctcctcc aacaaagtct ggatcccgct tttccaagtg 1440 gtgggaacca gcagccgccc gcgcttcgga atccgccacc gactcggcta tcgagggaat 1500 cgatgctgcc gggaaggccg cctccaaggc catcacgcgg aagctggacc gccccgccgc 1560 cccctcctca accgccaatc cccaaccatc tctcatcgct ctcaaccctt ctgccacgca 1620 atccggcaac gcttccatct tgaccggatc aactgctccc tccctcctcg cctaccccac 1680 cgccacccct gttccccttc ccaaccccga tgaaccctcc caacccggac catccggcga 1740 ccgcacctgg ttgttggata cagtcacctg gtcccaggag ttcacccgcg gctggaacat 1800 cgcaggctcc aatggcatgc aatggaccgg cctggaatcc cttatcttcc ctgtctccac 1860 tgacaccaat tggacctcca cctccagtcc taccgcatat cccctccctt tctccttcgt 1920 gcgtgcttac ccagactcct cctgggctgc catgtacaac acccactcca tgtggaattg 1980 cggttggcgc gttcaagtga ccgtcaacgg ctcacagttc catgccggag cccttatcct 2040 ctacatggtc cctgaagcca ccacccatgc catccaaacg gctcgggaca acgctggctt 2100 tgtcttcccc tatgtcatcc tcaatctcta tgaaagcaac accgctacca tagaggtccc 2160 ctacatctcc cccaccccca atacctcgag tggactccac gccccgtgga cgttctacct 2220 ccaggtgctc tcacccctca atcctccccc ttctctcccc acttccttat cctgctctat 2280 ctatgtcacc cccgttgact cctctttcca cggtctccgc tacctcgccc cacagcactg 2340 gaagactcgc gccgtcccag gtgcgggcac tttcggatct gccgtggctg gccaggaact 2400 ccctctctgt ggagtccgtg cctactaccc ccccaatgcc tacatccctg cccaggtacg 2460 cgactggctt gagttcgccc accggcctgg tctcatggcc acagtgccgt ggaccatggc 2520 ggacgagccg gccgagcgcc tcggtatctt ccccgtctct cccagtgcta tcgctgggac 2580 tggcgccccc atctcctatg ttatttctct cttctcccag tggcgcggtg aactcgccgc 2640 ccacctcctc ttcactggct ccgctcagca ctacggccgc ctggtcgtgt gctacactcc 2700 tgctgccccc caacccccct ccaccatgca ggaagcgatg cgcggaacat acaccgtatg 2760 ggacgtcaac gctgcctcaa ccctggagtt caccatcccc ttcatctcta actcctactg 2820 gaaaacagtg gacgttaaca accccgacgc tctgctgtcc accaccggct atgtttccat 2880 ctgggttcaa aacccgctag tcggacccca caccgcccct gcgtcggccc tcgtgcaggc 2940 attcatctcc gcaggtgaat ccttcaacgt acgactgatg caaaaccccg ccctcacttc 3000 ccaaaccctc accgaagacc tcgatgcacc ccaagacacc gggaacattg agaacggtgc 3060 ggctgacaac tccccgcagc cccgcaccac cttcgactac accggaaacc ccctccctcc 3120 agacaccaaa ctggaaaact tcttctcctt ctaccgcttg ctgcccatgg gtggcagcgg 3180 tgctccatct ctttctttcc ccgctgacga aggcacaatc atcccactcg acccaatcaa 3240 ttggctcaaa ggggcggacg tctccgggat cgctgcgatg ctatcgtgct tcacgtacat 3300 cgctgcggac ctgcgaatca cgctccgctt ctccaaccca aatgacaacc ctgccaccat 3360 gcttgttgcc ttcgctcccc ctggcgccac catccccctc aaacccacgc gccaaatgct 3420 ctccaacttc tacatggcgg aggtcccagt ctccgctgcc acctccacca tggtctcttt 3480 ctccatcccc tacacctccc ccctctctgc catccccacc tcatacttcg gatgggagga 3540 ctggtcaggt accaactttg gccagctctc ctccgggtca tggggaaacc tcatgctcat 3600 cccctctctc tctgtcgact ctgctatccc cttcgacttc cagctctctt gctgggtcgc 3660 cttcggcaac ttcaaagcct gggtcccccg cccacctcca cctctccccc ccctccccac 3720 ccctgccgcg aacgcggaac gcacagtggc cgtgatcaag cagggcgccg cctcagcgac 3780 tcccgatgtg gaccccgacg atcgggtcta catcgtgcgc gcgcagcgcc ccacctacgt 3840 ccactgggcc atccgcaagg tggcccccga cggcagtgcc aaacagatct cgctgtcccg 3900 cagcgggatc caggcactgg tcgccctcga accccccgag ggtgaacctt acctcgaaat 3960 tctcccctcc cattggaccc ttgctgaact ccaacttggc aacaagtggg agtacagcgc 4020 caccaacaac tgtacccact tcgtcagctc catcactggc gaatccctcc ccaacaccgg 4080 cttctccctg gccctcggaa tcggtgccct caccgccatc gcagcctcgg ctgctgttgc 4140 cgtgaaagcg ctcccaggca tcaggcgaca gggtctcctc accctctctg ccgataccga 4200 gaccaaccag accctcaaca agatcactgg atctgtcaac caagctgccc aggtcgtctc 4260 ccaattcgat ctgagcggcc ctgcaaattc tgtctccctt gctgcttctg acatccgcga 4320 ggctgcccac aaagtggcct cctccctcaa tggcttcact gacgtcatcg ctgacatcaa 4380 agattccctg ttcaccaggg tgtctgacgc tgtcgagagc ggtgtcgcca ctttcctcac 4440 ttggctcgtc aaactctttg gctacctcct tgttctcttt ggctctccaa cccccatgtc 4500 catctccggt ctcctcgtca tcatctgtgc cgaccttgcc ccccacgctc gtgaattttt 4560 caccgcctct ggaaatgtcc tctcctcact ctactactgg attgcctcaa aattaggcct 4620 gtccgtcacg ccccaagagt gtgaacgggc aacccttgaa cctcaagggc tcaaagactt 4680 caacgacggc gcactcgcaa tgcgcaacgt cgagtggatt ggtgagaccg cctggaaatg 4740 ggcccaccgc ctccttgact ggatccccgg taaggccaag acagaccccc aggccaaact 4800 cgccgacgtc cacgatgaaa tcatgctcca ctactcagac tccatattgg ctctcggatc 4860 tgagaaactc cccattgatc acatcactaa atccatctcc cgctgccgtg aattggtctc 4920 catcgcccag gaggccaaat ccggccctca ctcttccttc ctcaaccaag cagtcaaaaa 4980 ctacaccctt gccatctccc aacaccgcaa atgccagaca ggtcccaggc ctgaacccgt 5040 ggtggtctac ctctacggac cccccggcac tggcaaatcc ctccttgctt cactcctcgc 5100 tcaaaccctt tcccagcgtc ttgctgggac ccccgatgac gtctactccc cctcctccgc 5160 ctcctgtgag tacttcgatg ggtacacggg tcaaaccgtg cactttatcg atgacatcgg 5220 gcaggatccg gaggggcggg actgggctaa tttcccaaac ctcgtctcct ctgccccctt 5280 cattgtccca atggcctccc tcgaggagaa gggcacccac tacacctcca aggtcatcgt 5340 ggttacctcc aacttccacg agcctaacga gcgcgccgcg cgctcgatgg gcgctcttcg 5400 acgccgcgtc cacctgcgga tcaacgtcac ctcaaatgga gtgccatttg accctaccaa 5460 tgccctcaac cccatccccg gaacccaatc taaatacttc accgcccaaa cacctctcac 5520 cctattccag tccaacacgg tccgcctgga tcgtgactcc atctggaccc ctaccttcac 5580 caacatggac gagttggtgg acgcgattgt gacccgtctc gatcgctcca ccggcgtgtc 5640 caattccctc gcctccctca tcagacgcca gggcaaccgg gtcatcgacg cggaacccag 5700 ggaaatcccc ctggaatacg cggatgatct cctggaagcc atggcgcacc accgccctgt 5760 accatgctcc cttggcctct cccaagccat cgcaaacaac acccccatcc aacaaatctc 5820 tgaaaccttc tggaagtacc gcaaacccat cttcacttgc accactttcc tcgctgtcct 5880 cggtttcctc tgctctgtca tccctcttgc tcgctccctg tggaagtcca aacaggacac 5940 gccacaggaa cctcaagctg cctactctgc catctcccac cagaaaccca agcccaagtc 6000 ccagaaaccc gtccccactc gtcacatcca gcgccaggga atctcccctg ctgtccccgg 6060 catctccaac aatgtcgtcc atgtcgagtc cggcaacggt ctcaacaaga acgtcatgtc 6120 tggcttctac atcttctccc gcttccttct ggttcctacc cacctccgtg aaccccacca 6180 caccactctc acggtgggcg ccgacaccta cgactgggcc accctccaga cgcaggagtt 6240 cggtgaaatc accattgttc acactcccac ctcccgccag tacaaggaca tgcggcgctt 6300 catcggcgcc catccccacc ccactggact ccttgtttcc caattcaaag ctgcccccct 6360 ctatgtccgc atctccgaca accggatcct ggaccttgac ttccccggag tcgtcgtctg 6420 taagcaggcg tacggatacc gcgccgcgac cttcgaaggt ctgtgcggtt ccccgcttgt 6480 tacggatgat ccctccggag tcaagattct gggcctccac gtcgctggag tcgcgggcac 6540 gagcggattc tctgccccca tccaccccat cctcggccaa atcactcaat ttgccactac 6600 ccaacaatct ctcattgttc ccactgctga agtccggcct ggcgtcaacg tcaaccggat 6660 gtcccgcttg cacccctctc ccgcctacgg tgccttccct gtcaagaaac aacccgctcc 6720 cctcaagcgc aacgacaagc gcctgcagga gggcgtcgat cttgacaccc agctcttcct 6780 caaacacggc aaaggcgacg tcaccgggcc ctggcccggt ctcgaagctg ctgctgacct 6840 ctacttctcc accttcccca cttcccttcc agtcctcacc caggaacagg ccatccatgg 6900 aacaccaaac atggagggcc tggacatggg ccaggcggct ggatacccct ggaacaccct 6960 tgggcgctcc cggcgatccc tctttgacga ggttgaaccg ggagtgttcg tccccaaacc 7020 cgaactccaa gctgaaatca accagacact tgaagacccg gactacgtgt actccacctt 7080 cctcaaggat gaactcagac caacggctaa ggttgaacag ggactgacca gaatcgtcga 7140 agctgctccc atccatgcta tcgtcgctgg ccggatgctc ctcggtggtc tcatcgacta 7200 catgcagggg cgtcccggcg agcacggtag tgcggttggt tgcaacccag acgttcactg 7260 gacttccttc ttttacgcct tcagcgagtt ctctcaggta tacgatctgg actacaagtg 7320 ttttgatgct acccttcctt ctgctgtctt cacccttgtt gctgaccatc ttacccgcat 7380 caccggagat ccccgcgtcg gtcgctacat ccactccatc cgccattcac accacattta 7440 tggcaaccgg atgtacgaca tgatcggggg gaatccctcc ggttgtgtgg ccacctccat 7500 cctcaacacc atcatcaaca acatctgtgt cctctctgcc ctcatccaac accctgattt 7560 ctctccctcc cgcttccaca tcctggcgta cggtgacgac gtcatctacg ctacggaacc 7620 ccccatccat ccttccttcc ttcgggagtt ctaccagaaa cacacccctc tggtggtcac 7680 ccccgcaaac aaaggccagg atttcccacc cacgtctacg atctatgaag tcaccttcct 7740 caaacgctgg ttcgttccgg acgatgttag acccatctac attcaccctg tgatggaccc 7800 cgacacgtac gagcaatcgg taatgtggtt gcgtgatgga gatttccaag atgtggtcac 7860 ctctctctgc cacctggcct tccacagcgg acccaagacc tacgctgcct ggtgcatgaa 7920 agtgcgcgag cagtgcctca agtccgggtt cgcccccaac ttcctaccct actcctacct 7980 ccaactccgc tggctaaatc tgctggctgc ctgatagtta gggaacacag tgcctcggca 8040 cgcttagtta gttagaaccc tttgcccact cctccatggt gatataaaga ccacccactt 8100 ccttcgggtg agcccctaag ccatggttgt actgcactat catcctaaga cggtccttct 8160 tcggatcgca atctcaccct ggtgccgcgc ttccttcggg aactgcaccc gcggaccagg 8220 gccgtctttg aacttttcta actgttctta c 8251 //