ID   AB000839; SV 1; linear; genomic RNA; STD; VRL; 1215 BP.
XX
AC   AB000839;
XX
DT   11-FEB-1998 (Rel. 54, Created)
DT   18-JAN-2009 (Rel. 99, Last updated, Version 6)
XX
DE   Onion yellow dwarf virus NIb gene for polyprotein (RNA polymerase and coat
DE   protein), partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1215
RA   Sumi S.;
RT   ;
RL   Submitted (03-FEB-1997) to the INSDC.
RL   Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for
RL   Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima
RL   739-11, Japan
XX
RN   [2]
RX   DOI; 10.1007/s007050050271.
RX   PUBMED; 9505969.
RA   Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.;
RT   "Nucleotide sequence analysis of virus isolates indicates the presence of
RT   three potyvirus species in Allium plants";
RL   Arch. Virol. 143(1):97-113(1998).
XX
DR   MD5; ef896c806e7b995c7bbaa3ec9b7a5a68.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1215
FT                   /organism="Onion yellow dwarf virus"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="garlic"
FT                   /clone="Guae"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1000
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /gene="NIb"
FT                   /product="polyprotein"
FT                   /db_xref="GOA:O55507"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:O55507"
FT                   /protein_id="BAA24787.1"
FT                   /translation="YPDLLHEIRKFYQWLLEQAPYNMIAQSGKAPYIAETALKKLFTNI
FT                   DASEVELEKYYEVYLDIENEEVTQSEVRYQAGEGEDAAAQSSTSKQVTKQKDKDVDTGT
FT                   TGKFEIPRIKVLSDKMRFPKVGKNVVLNAEHLLAYKPDQIELYNTRSTKQQFENWYNAI
FT                   KKEYDVNDEQMKILLNGLMVWCIENGTSPNLSGNWTMMDGDEQVEYPLAPIVDNAKPTF
FT                   RQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKE
FT                   AHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADINKNHHPFPGIKM"
FT   mat_peptide     <1..226
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="C-terminal portion"
FT   mat_peptide     <227..997
FT                   /product="coat protein"
XX
SQ   Sequence 1215 BP; 415 A; 222 C; 273 G; 305 T; 0 other;
     ttaccctgat ctcctgcacg aaattcggaa gttctatcaa tggcttttgg aacaagctcc        60
     gtacaacatg atagcccaaa gtggaaaagc accttacata gcggagacag ctcttaagaa       120
     gttatttacc aatattgatg caagtgaagt agagttggag aaatactatg aagtgtatct       180
     ggatattgag aatgaagaag taactcagag cgaagttcgc tatcaggcag gtgaaggaga       240
     agatgcagct gcacaatcaa gcacgtcaaa acaagttaca aagcaaaagg ataaagatgt       300
     tgacactggc actaccggta agtttgaaat cccgagaatt aaagtgttgt ctgataaaat       360
     gagatttcca aaggttggca aaaacgttgt actcaatgca gaacatttgt tggcgtataa       420
     accagatcaa attgaactat acaacacaag gtcgacaaag cagcaatttg agaattggta       480
     taatgctata aagaaggagt acgacgtcaa tgatgaacaa atgaagattt tactgaatgg       540
     tttaatggtt tggtgcattg agaatggaac atccccaaat ttatcaggaa attggactat       600
     gatggatggt gacgaacaag tcgagtatcc attagcacca atcgttgata atgcaaaacc       660
     aacattcagg caaataatgg cgcatttcag tgatgcagct gaggcataca ttgaatacag       720
     gaacgccacg gaaaaataca tgccccggta tggacttcag cgcaatttaa cagaacttag       780
     tttagcacgt tacgcattcg atttttacga aatgacttca aagactccca agcgagcgaa       840
     agaagcacac atgcaaatga aggcggctgc ggttagaggg gcaactaatc gtttgtttgg       900
     cctggatggt aacgtaaaca caacagaaga ggacacggaa agacacacag ctgcagatat       960
     taataagaac caccacccgt tccccggtat caagatgtga acctccgttg ttgcctttag      1020
     ttttatatat atatatagtt atataaaacc gtatgtaata tgtaattctc ttcattccgt      1080
     tcaacctgcc ttcgaacaac ggaatgtggt gtaccactag ttgtggcgaa cgatacggtt      1140
     gaacatctgt gattaatgtt gaccttcatg agagtgatgt atcacgaggt gaatctttcc      1200
     gtgaattacg gagac                                                       1215
//