Dbfetch

Dbfetch

ID   JN544921; SV 1; linear; genomic RNA; STD; VRL; 679 BP.
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AC   JN544921;
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DT   10-JAN-2012 (Rel. 111, Created)
DT   10-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE   Apple chlorotic leaf spot virus isolate hz-11 coat protein gene, partial
DE   cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus.
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RN   [1]
RP   1-679
RA   Wang L., Song Y., Hong N., Wang G.;
RT   "Molecular variability of Apple chlorotic leaf spot virus (ACLSV) isolates
RT   from pear in China";
RL   Unpublished.
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RN   [2]
RP   1-679
RA   Wang L., Song Y., Hong N., Wang G.;
RT   ;
RL   Submitted (03-AUG-2011) to the INSDC.
RL   Huzhong Agricultural University, College of Plant Science and Technology,
RL   Shizishan Str. No. 1, Wuhan, Hubei 430070, China
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DR   MD5; 761cab46f5020172779df4c453c82687.
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FH   Key             Location/Qualifiers
FH
FT   source          1..679
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /host="pear"
FT                   /isolate="hz-11"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /isolation_source="Hangzhou"
FT                   /collection_date="Apr-2010"
FT                   /note="genotype: genomic RNA"
FT                   /db_xref="taxon:12175"
FT   CDS             <1..506
FT                   /codon_start=3
FT                   /product="coat protein"
FT                   /db_xref="GOA:H2D5N8"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:H2D5N8"
FT                   /protein_id="AEX25791.1"
FT                   /translation="HGKTGAILEQMLESIFANIAIQGTSEQTEFLDLMVEVKSMEDQKV
FT                   IGSYNLKEIVNMIKAFRTTSSDPNINNMTFRQVCEAFAPEARNGLVKLKYKGVFTNLFT
FT                   TMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVITNMNRRLLQTEFAKSENEAKLSSVST
FT                   DLCI"
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SQ   Sequence 679 BP; 220 A; 116 C; 160 G; 183 T; 0 other;
     ttcatggaaa gacaggggca atcctggaac agatgttgga gtccatcttc gcgaacatag        60
     caatccaagg gacgtcagag cagacggaat ttctggacct gatggtggag gtgaaatcaa       120
     tggaggacca gaaggtgatt gggtcataca atctgaagga gatcgtcaat atgatcaaag       180
     ccttcaggac tacctcttcg gatccgaaca tcaacaacat gaccttccgg caggtatgtg       240
     aggcgtttgc gcctgaggca agaaatgggt tggtcaaact caagtataaa ggggttttca       300
     caaacctttt tactacaatg ccagaggttg ggagcaaata cccggagctg atgtttgact       360
     tcaataaggg cctcaacatg ttcatcatga acaaggctca gcaaaaggtg ataactaata       420
     tgaaccgtcg tcttttacag actgaatttg caaaaagtga aaatgaggcg aaactctcgt       480
     ctgtctcaac tgatctttgc atttagtctg tttaggaggt ttggtttgat aaataaaata       540
     aataaatagc gtatttgaat ttaatgttat gtcgaatatg tttgacgaat aaacaaactc       600
     ttgaacccat gaaagagtat aaagagtcat ggtatttaaa ttggagtgtt tagacttata       660
     ataaatagcc tgtagactt                                                    679
//