Dbfetch

Dbfetch

ID   GU580910; SV 1; linear; genomic DNA; STD; VRL; 467 BP.
XX
AC   GU580910;
XX
DT   02-MAR-2011 (Rel. 108, Created)
DT   23-DEC-2012 (Rel. 115, Last updated, Version 3)
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DE   African cassava mosaic virus isolate AOUN segment A transcriptional
DE   activator (AC2) and replicase (AC1) genes, partial cds.
XX
KW   .
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OS   African cassava mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-467
RA   Matic S., Pais da Cunha A.T., Thompson J.R., Tepfer M.;
RT   "An analysis of viruses associated with cassava mosaic disease in three
RT   Angolan provinces";
RL   J. Plant Pathol. 94(2):443-450(2012).
XX
RN   [2]
RP   1-467
RA   Matic S., Thompson J.R., da Cunha A.T.P., Tepfer M.;
RT   ;
RL   Submitted (22-JAN-2010) to the INSDC.
RL   Istituto di Virologia Vegetale, CNR, Strada delle Cacce 73, Torino 10135,
RL   Italy
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DR   MD5; 7bef1c76a7ba5ea53f8c3ecf77177882.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="African cassava mosaic virus"
FT                   /segment="A"
FT                   /host="Manihot esculenta"
FT                   /isolate="AOUN"
FT                   /mol_type="genomic DNA"
FT                   /country="Angola"
FT                   /collection_date="08-Jan-2009"
FT                   /db_xref="taxon:10817"
FT   gene            complement(<1..138)
FT                   /gene="AC2"
FT   CDS             complement(<1..138)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator"
FT                   /db_xref="GOA:F1AG09"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:F1AG09"
FT                   /protein_id="ADY17057.1"
FT                   /translation="MQSSSPSQNHSTPVPIKVNHRQFKKRAIRRRRVDLVCGCSYYLHI
FT                   N"
FT   gene            complement(47..>467)
FT                   /gene="AC1"
FT   CDS             complement(47..>467)
FT                   /codon_start=2
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:F1AG10"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:F1AG10"
FT                   /protein_id="ADY17058.1"
FT                   /translation="GDSRTGKTIWARSLGPHNYLCGHLDLSPKVFNNDAWYNVIDDVDP
FT                   HYLKHFKEFMGSQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQAALK
FT                   AWALKNAVFITLTEPLYSGSNQSQSQTIQEARHQA"
XX
SQ   Sequence 467 BP; 104 A; 102 C; 122 G; 139 T; 0 other;
     gttgatgtgg aggtaatatg aacagccaca gacaagatcc actctcctac gcctgatggc        60
     gcgcttcttg aattgtctgt gattgacttt gattggaacc ggagtagagt ggttctgtga       120
     gggtgatgaa gactgcattc tttaatgccc aagcctttag tgctgcttgc ttttcctcgt       180
     ccagaaactc tttataggac gaggtaggtc ctggattgca gaggaagata gtgggaatgc       240
     cacctttaat ttgaacgggt ttcccgtatt tcgtgttgga ctgccagtcc ctctgggacc       300
     ccatgaattc cttaaagtgc ttgaggtagt ggggatcgac gtcatcaatg acgttgtacc       360
     aggcatcatt attgaagacc tttggactaa ggtccaggtg tccacacagg taattgtgtg       420
     ggcctaaaga tctggcccat atcgtcttcc ctgttctgct atcacct                     467
//