Dbfetch

Dbfetch

ID   GU580901; SV 1; linear; genomic DNA; STD; VRL; 467 BP.
XX
AC   GU580901;
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DT   02-MAR-2011 (Rel. 108, Created)
DT   23-DEC-2012 (Rel. 115, Last updated, Version 3)
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DE   African cassava mosaic virus isolate AO3 segment A transcriptional
DE   activator (AC2) and replicase (AC1) genes, partial cds.
XX
KW   .
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OS   African cassava mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-467
RA   Matic S., Pais da Cunha A.T., Thompson J.R., Tepfer M.;
RT   "An analysis of viruses associated with cassava mosaic disease in three
RT   Angolan provinces";
RL   J. Plant Pathol. 94(2):443-450(2012).
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RN   [2]
RP   1-467
RA   Matic S., Thompson J.R., da Cunha A.T.P., Tepfer M.;
RT   ;
RL   Submitted (22-JAN-2010) to the INSDC.
RL   Istituto di Virologia Vegetale, CNR, Strada delle Cacce 73, Torino 10135,
RL   Italy
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DR   MD5; ba084f58355dab82b4dd8a692bc12919.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="African cassava mosaic virus"
FT                   /segment="A"
FT                   /host="Manihot esculenta"
FT                   /isolate="AO3"
FT                   /mol_type="genomic DNA"
FT                   /country="Angola"
FT                   /collection_date="08-Jan-2009"
FT                   /db_xref="taxon:10817"
FT   gene            complement(<1..138)
FT                   /gene="AC2"
FT   CDS             complement(<1..138)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator"
FT                   /db_xref="GOA:F1AFZ1"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:F1AFZ1"
FT                   /protein_id="ADY17039.1"
FT                   /translation="MQSSSPSQNHSTQVPIKFNHRQFKKRAIRRRRVDLVCGCSYYLHI
FT                   N"
FT   gene            complement(47..>467)
FT                   /gene="AC1"
FT   CDS             complement(47..>467)
FT                   /codon_start=2
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:F1AFZ2"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:F1AFZ2"
FT                   /protein_id="ADY17040.1"
FT                   /translation="GDSRTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDP
FT                   HYLKHFKEFMGSQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEERQESLK
FT                   AWALKNAIFITLTEPLYSGSDQIQSQTIQEESHQA"
XX
SQ   Sequence 467 BP; 108 A; 99 C; 116 G; 144 T; 0 other;
     gttgatgtgg aggtaatatg aacagccaca gacaagatca actctcctac gcctgatggc        60
     tctcttcttg aattgtctgt gattgaattt gatcggaacc tgagtagagt ggttctgtga       120
     gggtgatgaa gattgcattc tttaatgccc aagcctttag ggattcttgc ctttcctcgt       180
     ctagaaactc tttatatgac gaggtaggtc ctggattgca gaggaagata gtaggaattc       240
     cacctttaat ttgaacgggt ttcccgtatt tcgtgttgga ctgccagtcc ctctgggacc       300
     ccatgaattc cttaaagtgc tttaggtagt ggggatcgac gtcatcaatg acgttgtacc       360
     aggcagcatt attgaagacc tttggactaa ggtccaggtg tccacacagg taattgtgtg       420
     ggcctaaaga tctggcccat atcgtcttcc ctgttctgct atcacct                     467
//