ID Z69910; SV 1; linear; genomic RNA; STD; VRL; 4019 BP. XX AC Z69910; XX DT 01-JUN-1996 (Rel. 47, Created) DT 31-JUL-2015 (Rel. 125, Last updated, Version 5) XX DE Groundnut rosette virus complete genome, strain MC1 XX KW . XX OS Groundnut rosette virus OC Viruses; Riboviria; Tombusviridae; Calvusvirinae; Umbravirus. XX RN [1] RP 1-4019 RX PUBMED; 8811035. RA Taliansky M.E., Robinson D.J., Murant A.F.; RT "Complete nucleotide sequence and organization of the RNA genome of RT groundnut rosette umbravirus"; RL J. Gen. Virol. 77:2335-2345(1996). XX RN [2] RP 1-4019 RA Robinson D.; RT ; RL Submitted (28-FEB-1996) to the INSDC. RL Robinson D., Scottish Crop Research Institute, Invergowrie, Dundee, RL Scotland, UK. XX DR MD5; e2e38bb0792349a7bda6b6fec6724f8c. XX FH Key Location/Qualifiers FH FT source 1..4019 FT /organism="Groundnut rosette virus" FT /host="Arachis hypogeae" FT /strain="MC1" FT /mol_type="genomic RNA" FT /db_xref="taxon:47740" FT CDS 13..870 FT /gene="orf1" FT /db_xref="GOA:Q67683" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/Swiss-Prot:Q67683" FT /protein_id="CAA93799.1" FT /translation="MATIRHIMDWLRPTFTPLAGVKSRQECIAHYGDDWALMITQSRMT FT LSAEAQVNAWYEGGAEVNGSIPSVEGNAAAPQAAAVVAEPPHPSPAENEGEDASWVAAL FT PAPPTYEVVQGRAPTLEEIHGASRLQIVPYTGRARVIGEDEVLPSPVLSSIWRATRCPG FT RILRVLGTLLKPGACQRHLEDLREVQPQVCVGNPCEVKLQEEGAPMAYMNAQSIAMELR FT AMFGWQAATPANRELGNRVARDILRDGCGATREQIWYMSSLALHMWFQPTLCDLAIKAG FT AQNF" FT CDS join(13..866,866..2531) FT /ribosomal_slippage FT /gene="RdRp" FT /product="RNA polymerase" FT /note="expressed by -1 frameshift as an extension of ORF1" FT /db_xref="GOA:A0A0K3AU46" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:A0A0K3AU46" FT /protein_id="CTQ57207.1" FT /translation="MATIRHIMDWLRPTFTPLAGVKSRQECIAHYGDDWALMITQSRMT FT LSAEAQVNAWYEGGAEVNGSIPSVEGNAAAPQAAAVVAEPPHPSPAENEGEDASWVAAL FT PAPPTYEVVQGRAPTLEEIHGASRLQIVPYTGRARVIGEDEVLPSPVLSSIWRATRCPG FT RILRVLGTLLKPGACQRHLEDLREVQPQVCVGNPCEVKLQEEGAPMAYMNAQSIAMELR FT AMFGWQAATPANRELGNRVARDILRDGCGATREQIWYMSSLALHMWFQPTLCDLAIKAG FT AQNFLVGEVYARSGVETKTRPKILSPQIKVKLAARPRPVKRVSYNVDVLGPSADYGVHN FT NSLNNLVRGVNERVFYTNNQGKLPLAPAAGAYQQIDCAALKQFRVTPWSLDDVWMSYKG FT SQRVRYKQAVDSLGMRPLSKSDARVSTFIKAEKVNFRAKPDPAPRVIQPRDPRFNAVFA FT KYIKPLEPLLYKALGKLYKYPCVAKGFNAVETGEIVAKKWKMFANPVCVGLDASRFDQH FT VSVDALRFTHGVYRRFVKSSEFDKLLRWMYTNRCRGAAKDGFVKYTVNGCRMSGDMDTA FT LGNCVLMVLMTRHLLMSLGIPHELLDNGDDCIVIMDQEHLAKFNDAVKPYYSNLGFTMK FT VEEPVYSLERVDFCQTRPVYDGKKWRMVRHITSVAKDCCTVINWEQLPSWLSAIGECGI FT AVAGGIPVHNSFLRYLMRVGGTKGGIENHLLWKNEGLSWYRMGMDLSHEKVVSDEARLS FT FQTAFGISPTMQRALEDLYDGLGAPTVNGCDYRTVKTRDCREIECMPPRHYNHYFIDCG FT MQPAGSQEQYVNPGYTIFEAAALWAQC" FT regulatory 866 FT /note="signal for -1 frameshifting" FT /regulatory_class="other" FT CDS 2641..3396 FT /gene="orf3" FT /db_xref="GOA:Q67684" FT /db_xref="InterPro:IPR006902" FT /db_xref="UniProtKB/Swiss-Prot:Q67684" FT /protein_id="CAA93800.1" FT /translation="MDTTPASRGQWPVGIMSSVINVFASGKSCNSGGAPRSSVRRGHRA FT GAARDKSRGFDAPPRRPKGGVHPATTSKDPNKDIRGPPAPTPHKKYRGPAIPGEGRSGV FT HTTRPRRRAGRSGGMDPRQLVAQPQQRWAKTEIPTERRAEIDGLLPSLLNTLDGQIQGD FT AALLRYCVGAIKRELRRRWESVQPAHHVAASSGKPSPQLFNEAAQNAEDLSGDGKGCAG FT QSVQQEVLHSGSGVPPVCADCGKPAANKW" FT CDS 2702..3484 FT /gene="orf4" FT /db_xref="GOA:Q67685" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/Swiss-Prot:Q67685" FT /protein_id="CAA93801.1" FT /translation="MSSQVAKAATQGELLEALYGEVTVQELQETNLGVLTPHRGDQRVV FT FTPLLPPRTQTRISGVLRRLRPTRNTGGLLYLEKVVVVFTPHVPDDAPGEVEVWIHDSL FT LPNLNSVGPRLRFPLNGGPRLMAFYPPYSIPLMDKSKEMPRCFAIVSELLSASYVGGGS FT PFSLHIMWQPQVESLAHNYLMRPPRMQKICRGMVKDALGSLSSRKSYIAGAVSHRFALT FT AANPLPISGDTAEEAGEASSGEPHWVPEATAPRVRKAT" XX SQ Sequence 4019 BP; 970 A; 1061 C; 1176 G; 812 T; 0 other; gggggtttca acatggcgac tataaggcac attatggatt ggctgcggcc aacattcaca 60 cctcttgctg gtgtaaaatc ccggcaagag tgtattgcgc attatgggga tgactgggcc 120 ctaatgatca cccagtccag aatgaccctt tccgctgagg cccaggtgaa cgcctggtat 180 gaggggggag ccgaagtgaa cggctccatt ccctcagtgg aagggaacgc agccgcccca 240 caggctgctg cggtggttgc tgagccaccg cacccctccc ctgcggagaa cgagggggaa 300 gatgcaagct gggttgcagc actcccagca cctcccacct acgaggtggt tcagggtcgg 360 gcaccgactc tagaggaaat tcacggagct agccggcttc agattgtgcc atataccggc 420 agagctcgcg tgatcggcga ggacgaagtt cttccctcgc cggtcctgtc atccatttgg 480 cgggccactc gctgtcccgg gaggattttg agagtactcg ggacactgct gaaacctggt 540 gcgtgtcaac gtcacctgga ggacctgcgg gaggtgcagc cgcaggtatg tgttggcaac 600 ccctgcgagg ttaagctgca ggaggaaggt gcacccatgg catatatgaa cgcacagtca 660 atagccatgg agttgcgggc catgtttggg tggcaagctg ccacccccgc caacagggag 720 ctgggcaacc gcgttgccag ggacatcctc cgtgatggct gcggagcgac gagggagcaa 780 atttggtata tgagctccct tgccctgcac atgtggttcc agcccacact ctgtgacctg 840 gctatcaagg ccggggcaca aaatttttag ttggggaagt gtatgctagg tctggcgtgg 900 agactaaaac aaggcccaag atcctgtctc cccagatcaa ggtgaaactg gcagcacgac 960 cccggccagt gaaaagagtc tcatacaatg tggacgtatt gggacctagc gctgattatg 1020 gagtccacaa caactctctg aataacctgg ttcggggagt aaatgagcga gtgttctaca 1080 ccaacaacca gggcaagttg cctctcgctc cagctgcagg cgcgtaccag caaatcgatt 1140 gcgccgcgct gaaacagttt cgtgtcaccc cttggtccct ggatgatgtc tggatgagtt 1200 acaagggtag ccaaagagtt cgctataaac aggcagttga cagcctaggc atgcgaccat 1260 tgagcaaaag tgacgcgagg gtcagcacct tcataaaagc agagaaggta aattttaggg 1320 ctaagcctga ccctgcccca cgtgtgatac aaccacgcga tccaaggttc aacgctgtat 1380 ttgcgaaata cataaaaccc ttggagcctt tgctctataa ggcattgggc aaactgtaca 1440 agtatccctg cgtagccaag ggatttaatg ctgtcgagac tggggaaata gtggcaaaga 1500 agtggaagat gtttgccaac ccagtctgcg tcggccttga tgctagtcgg tttgaccagc 1560 atgtttcggt ggatgccttg aggttcaccc acggcgtgta cagaaggttc gtcaagagct 1620 cggagtttga caagttgctc cgttggatgt acacaaaccg ttgcagagga gctgcaaaag 1680 acgggtttgt aaaatacacc gtcaacggtt gccggatgag tggtgacatg gacacagctt 1740 tgggaaactg tgtcctcatg gttttgatga ctcggcacct cctgatgtct ctggggattc 1800 cccatgagct gctcgacaac ggtgacgact gcattgtcat catggaccag gagcacctgg 1860 ctaaatttaa cgacgcagtc aagccgtact acagcaacct tggcttcacc atgaaggtgg 1920 aggagccggt ctactctctg gaacgagtgg acttctgcca aacgagaccc gtctatgatg 1980 ggaagaaatg gaggatggtg cgccacatta ccagcgtcgc taaggactgc tgcaccgtca 2040 taaactggga acaactaccg tcatggctgt ctgctatagg cgaatgtggc atcgccgtag 2100 ctggaggaat cccagtacac aactcgttct tgcgctacct catgcgcgtt ggcggaacca 2160 aaggaggaat agagaaccac ctcctttgga agaatgaagg gctctcctgg tatcgcatgg 2220 gtatggactt gtcgcacgaa aaagtcgtca gcgatgaggc aaggttgagt tttcaaaccg 2280 cctttggaat tagtccaacc atgcaacgcg cccttgagga cctgtacgac ggtctcggcg 2340 ccccgacagt gaacggatgt gactaccgca ctgtcaagac cagggactgc agggaaatag 2400 aatgcatgcc tccgcgccac tacaatcact acttcattga ttgcggcatg caaccagccg 2460 gtagccagga gcagtatgtc aaccctggtt acactatatt tgaggcggct gcgttatggg 2520 cccagtgctg accacactgg ccccacaggg aacctcctga aatcccagga gaacatgttc 2580 aagggaagcc ggcgaaagct accatgaata gacatggtta gacaccctcc cccatggcga 2640 atggacacca ccccggctag ccgcggacaa tggccggtgg gtatcatgtc aagtgtaata 2700 aatgtcttcg caagtggcaa aagctgcaac tcagggggag ctcctcgaag ctctgtacgg 2760 agaggtcacc gtgcaggagc tgcaagagac aaatctcggg gttttgacgc cccaccgagg 2820 agaccaaagg gtggtgttca ccccgctact acctccaagg acccaaacaa ggatatcagg 2880 ggtcctccgg cgcctacgcc ccacaagaaa tacagggggc ctgctatacc tggagaaggt 2940 cgtagtggtg ttcacaccac acgtcccaga cgacgcgccg ggagaagtgg aggtatggat 3000 ccacgacagc ttgttgccca acctcaacag cgttgggcca agactgagat tcccactgaa 3060 cggagggccg agattgatgg ccttttaccc tccttactca atacccttga tggacaaatc 3120 caaggagatg ccgcgttgct tcgctattgt gtcggagcta ttaagcgcga gctacgtagg 3180 aggtgggagt ccgttcagcc tgcacatcat gtggcagcct caagtggaaa gcctagccca 3240 caactattta atgaggccgc ccagaatgca gaagatctgt cgggggatgg taaaggatgc 3300 gctgggcagt ctgtccagca ggaagtccta catagcggga gcggtgtccc accggtttgc 3360 gctgactgcg gcaaacccgc tgccaataag tggtgacacc gcagaagagg caggcgaggc 3420 tagtagtggc gagcctcact gggtgcctga ggccaccgca ccacgcgtcc gcaaagcgac 3480 gtaaaactac gaccccgcca ggggttaatt ctaccacagg ttggcagctg tgggatccca 3540 gtccaggtgt ctttaactag atgtggatgg actggttgat tttgtcggcc ttgatagggg 3600 acgaaaccac gagtcaagcg gaagagatag ggggtgttgg atcccgggaa actggcagct 3660 gggcagcgta agcacgggtg tgtgaacccc acaccgacgt atcacccccc ttggacttag 3720 tacgcgattt gaggcggttg ttccacgtgg gaagcaggct cggcacccaa tccgacaggg 3780 aaaagtcgta ggctccggcg ctgcgggagg gtaaactagc ggccgatacg cattgtgcag 3840 tgcgttggtc ccactcagca catggcgctc tgccataggg acggaagggc cgtggtactc 3900 ccttcaacag gcggcaccca gtgaggctcg ccaatccata tgactaggat tatgctgagt 3960 gataccccct ttcgaacgta cggacgtcca gctgagatct cctagataac atgacaccc 4019 //