Dbfetch
ID Z46351; SV 1; linear; genomic RNA; STD; VRL; 3065 BP. XX AC Z46351; XX DT 06-DEC-1995 (Rel. 46, Created) DT 24-AUG-2005 (Rel. 84, Last updated, Version 3) XX DE Lychnis ringspot virus RNA for beta-A, beta-B, beta-C, beta-D proteins. XX KW coat protein. XX OS Lychnis ringspot virus OC Viruses; Riboviria; Virgaviridae; Hordeivirus. XX RN [1] RC (sites) RA Solovyev A.G.; RT ; RL Unpublished. XX RN [2] RP 1-3065 RA Solovyev A.; RT ; RL Submitted (21-OCT-1994) to the INSDC. RL Solovyev A., Institute of Biochemistry and Plant Virology, Messeweg 11/12, RL Braunschweig, Germany. XX DR MD5; 73efb02ce9fdce8e37b3c28e37dc3e08. XX FH Key Location/Qualifiers FH FT source 1..3065 FT /organism="Lychnis ringspot virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:44421" FT misc_feature 1..3065 FT /note="genomic RNA beta, partial sequence" FT CDS 157..744 FT /product="beta-A protein" FT /function="coat protein" FT /db_xref="GOA:Q83076" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q83076" FT /citation=[1] FT /protein_id="CAA86469.1" FT /translation="MANLGLTVKGGGHYDEDQWNSNIIDSKVIYDWWISLDSWHSLIST FT LSKVQTDVVSSRRAIADLIDGVKKDLPAALDRRFAGSQGVLGAANYRAPPLFVRLDSAM FT RANLIAIARMGDQPFLSRDQELSRNRPNTGTNQQPSNALVARDVQPLRDSALHFTYDLK FT DLVTSDPPVFDRRSFEAKFQLNWVARAPGDNA" FT CDS 850..2211 FT /product="beta-B protein" FT /function="virus cell-to-cell movement protein" FT /db_xref="GOA:Q83077" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q83077" FT /citation=[1] FT /protein_id="CAA86470.1" FT /translation="MNIFLVYNTMAIDKIVKSDNRSQKQQSSKKKKNRKHGNKVVENST FT NVGVPPNEGVTLRRVRSVESIDEIFTSNQRTPPAAEQLPQKQKQSKPPSVAKKHAANDK FT RRYEKADAFMNKIVEASRASGFQPTGQNFKRCPANLFEKCKLRALYDKHLRVLHKDACD FT SEKERIAAKSFLHRSLRPNVDFKVGIVSGVAGSGKSTLIRKLCSEADAMCVLANPRLKE FT TDYKGQSKTFTLQQVLLSIVPMTSDIVIVDEYTLAESAELLLLQRKLQATFLVLFGDVA FT QGNAKTASSLEYLQFPVVFISKTSHRLGKHTAELCKKHGQAFEPGSPEEDEIIVADYLG FT AADTTEKNIAFTKETVEDLRDAGVEASLVLETQGKEYESVTLFIRESDEAAMADSHLRA FT VALTRHRKKLIIRAEPGVQSSFLNGELKSKTSADSHKYESSKVSYADSSSAAAQ" FT CDS 2180..2551 FT /product="beta-D protein" FT /function="virus cell-to-cell movement protein" FT /db_xref="GOA:Q83078" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q83078" FT /citation=[1] FT /protein_id="CAA86471.1" FT /translation="MPTQVAQRPNKYWPIVVGVGLIGLFAYLIFTNQKHATQSGDNIHK FT FANGGSYQDGNKRINYNKNNNLAYGYKGLSNASSVDLWMLGLCIAAIAAGIYGEYLRKR FT KHDECTTCPPDCKICGGWR" FT CDS 2406..2879 FT /product="beta-C protein" FT /function="virus cell-to-cell movement protein" FT /db_xref="GOA:Q83079" FT /db_xref="InterPro:IPR007617" FT /db_xref="UniProtKB/TrEMBL:Q83079" FT /citation=[1] FT /protein_id="CAA86472.1" FT /translation="MPHPLTCGCSDCVLPPLQREFTESIYANENMMSAPPAPQTAKSVV FT GGDDLFLMMYSFLAGVLLTLLVIWSVGGTTCSNPQKASYYYQDLNKIEMEVAPGSPIDP FT EVIKAIHHFQNFPYGRTPGLGWIDDVTTLVTVWFTRLIYLGIIFFFIWVFKNI" XX SQ Sequence 3065 BP; 889 A; 597 C; 681 G; 898 T; 0 other; tttactgcgt cagtggtttt gcaataacag tttaatcgac tttaagatgt aaaacatacc 60 agcaatcgaa gaggactggc tgaaaagcac ttctcttcac ctatcttata ttagtattag 120 gtttttctgt ttttgttttt ccttacatta cctgtcatgg ctaatcttgg actcaccgtg 180 aaaggtggcg gtcactacga cgaggatcaa tggaatagca acatcattga ctctaaagtt 240 atctacgatt ggtggatatc tttagatagt tggcactctc tgatcagcac tttatcaaaa 300 gtgcagactg atgttgtcag ctctcgtcgg gctatcgcag atcttatcga tggggtcaag 360 aaggaccttc ctgctgcctt agacagacgt ttcgccggtt ctcaaggggt tttaggtgct 420 gctaattatc gagcaccgcc tcttttcgtg agattggata gcgcaatgag agcgaatctc 480 attgcaatcg ctcgcatggg tgatcagcct ttcctctctc gcgatcagga attaagtcgt 540 aacagaccta ataccggaac caatcaacag ccttcaaacg cattagtggc ccgagacgtg 600 caacctttgc gcgacagtgc tttgcatttc acttatgatc tgaaggactt ggttacaagc 660 gatccgcctg ttttcgaccg cagaagtttc gaagctaagt tccagttgaa ctgggtagct 720 cgagctccgg gagacaatgc ttaaatgccc tccttagtct tgtacagtgt agtgtaattt 780 tttatctttg tttgagtttt tcttttcatt atatatgtta atatgtgttt ttactagtct 840 gtgtctagga tgaatatttt cttggtttat aatactatgg ctattgacaa gatcgttaag 900 agtgataacc gttctcaaaa acaacaatcg tcaaagaaaa agaaaaaccg gaaacatggc 960 aataaagttg ttgaaaattc caccaatgtc ggggtgcctc ccaacgaagg ggttactttg 1020 cgaagagttc gcagtgttga atctattgat gagattttta cgtctaatca acggactcca 1080 cctgcggcag agcagcttcc tcagaagcag aagcaaagta agcccccttc tgttgcgaag 1140 aaacatgctg caaacgataa gaggcgttat gaaaaagctg atgctttcat gaacaaaatc 1200 gtcgaagcaa gtcgagcctc tggctttcaa ccaacagggc agaacttcaa acgttgtcct 1260 gccaaccttt ttgaaaaatg caagttacgt gcgctttatg acaaacacct tagggttttg 1320 cataaggacg cttgtgattc agaaaaagag agaatcgcag ctaaatcgtt cttacatcgt 1380 agtcttcgtc cgaacgtcga tttcaaagtt ggaatcgtgt ctggcgtagc aggttcagga 1440 aagtctacac tcataagaaa gctctgctct gaagcagatg ctatgtgcgt tctggctaac 1500 ccgcgcttga aagagactga ttataaaggt caaagcaaga cttttacgct tcagcaggtt 1560 ctgttatcaa tcgtgccgat gacatccgat attgtgattg ttgatgaata cacactcgct 1620 gagagtgcgg aattgttgct gctgcaaaga aaattgcagg cgactttcct tgtgttgttc 1680 ggggatgtag ctcaaggcaa tgcaaaaacc gcatccagcc tcgagtacct ccagtttcct 1740 gtcgtattca tttcaaaaac atcacatcgt ttgggcaaac acacagcaga gctttgcaag 1800 aagcatggtc aggccttcga gcccggttca ccagaggaag atgaaataat agtggcagac 1860 tatctaggag cagccgatac tacagaaaag aacattgctt tcactaagga gactgtggaa 1920 gacttgcgcg atgccggtgt ggaggcgtcg cttgtacttg aaacgcaagg taaagaatac 1980 gaaagtgtta cgttgtttat aagagaaagt gatgaggcag ccatggctga ttctcatcta 2040 agagcagttg ctctcactcg tcatagaaaa aagttgatta ttagggcaga acctggtgta 2100 cagagttctt tccttaatgg tgaattaaaa tcaaagacaa gtgctgactc tcataaatac 2160 gaaagctcaa aggtttctta tgccgactca agtagcgcag cggcccaata agtattggcc 2220 tatagttgtt ggtgtgggtt tgataggtct ttttgcttat ctgatcttta ccaatcaaaa 2280 gcacgcaacg caatcaggtg ataatattca caaatttgcc aacggtggtt cttatcaaga 2340 cggtaataaa agaataaatt ataacaaaaa taataattta gcttacggtt ataaaggatt 2400 atctaatgcc tcatccgttg acttgtggat gctcggattg tgtattgccg ccattgcagc 2460 gggaatttac ggagagtatc tacgcaaacg aaaacatgat gagtgcacca cctgcccccc 2520 agactgcaaa atctgtggtg ggtggcgatg atctattctt aatgatgtat agtttcttag 2580 caggtgtatt acttacctta ctagtaattt ggtctgtagg tggtactacg tgttcaaatc 2640 ctcagaaagc ttcttactac tatcaagatt tgaataaaat cgagatggaa gtcgctcctg 2700 gttcgcctat tgaccctgag gtcattaagg ctatacacca ctttcagaat tttccttatg 2760 ggagaactcc tggacttggt tggattgatg atgttactac tttggtaaca gtgtggttca 2820 ctagactgat atatctaggg attatattct tctttatatg ggtttttaaa aacatataaa 2880 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaatttt aatttttaaa ttaggatttg 2940 cttaatacag agactgcgac gcctataaac gggttcgtag ggttgtgtat taggaattgg 3000 tgattatttc cgcttactcc tgtgcggatg caacaatgtt ttgacattga tcactgagtt 3060 tcaga 3065 //