ID   Z29526; SV 1; linear; genomic DNA; STD; VRL; 1784 BP.
XX
AC   Z29526;
XX
DT   24-JAN-1994 (Rel. 38, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 3)
XX
DE   Potato virus Y (strain O) CI, 6K2, VPg, NIa-Pro, NIa gene
XX
KW   6 kd protein; 6K2 gene; cI gene; Cytoplasmic inclusion protein;
KW   genome-linked protein; nia gene; polyprotein; protease;
KW   Small nuclear inclusion protein; VPg gene.
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1784
RA   Welnicki M.A., Baulcombe D.C.;
RT   "The nucleotide sequence of the central fragment of potato virus Y (O
RT   strain) genome encoding 6K2 and VPg proteins.";
RL   Unpublished.
XX
RN   [2]
RP   1-1784
RA   Welnicki M.A.;
RT   ;
RL   Submitted (19-JAN-1994) to the INSDC.
RL   Welnicki M. A., Institute of Biochemistry and Biophysics, Department of
RL   Protein Biosynthesis, ul. Pawinskiego 5A, Warszawa, Poland, 02-106
XX
DR   MD5; f8f251c7f352dad433330a364abba403.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1784
FT                   /organism="Potato virus Y"
FT                   /strain="O"
FT                   /isolate="British"
FT                   /mol_type="genomic DNA"
FT                   /clone="pPVY15"
FT                   /db_xref="taxon:12216"
FT   mat_peptide     1..850
FT                   /partial
FT                   /codon_start=2
FT                   /gene="CI"
FT                   /product="Cytoplasmic inclusion protein"
FT                   /function="RNA helicase"
FT                   /note="putative"
FT   CDS             <1..>1784
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q85258"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR013648"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:Q85258"
FT                   /protein_id="CAA82642.1"
FT                   /translation="RLGRVGRFKKGVALRIGHTEKGIIEIPSMIATEAALACFAYNLPV
FT                   MTGGVSTSLIGNCTVRQVKTMQQFELSPFFIQNFVAHDGSMHPVIHDILKKYKLRDCMT
FT                   PLCDQSIPYRASSTWLSVSEYERLGVALEIPKQVKIAFHIKEIPPKLHEMLWETVVKYK
FT                   DVCLFPSIRASSISKIAYTLRTDLFAIPRTLILVERLLEEERVKQSQFRSLIDEGCSSM
FT                   FSIVNLTNTLRARYAKDYTADNIQKLEKVRSQLKEFSNLDGSACEENLIKRYESLQFVH
FT                   HQAATSLAKDLKLKGTWKKSLVAKDLIIAGAVAIGGIGLIYSWFTQSVETVSHQGKNKS
FT                   KRIQALKFRHARDKRAGFEIDNNDDTIEEFFGSAYRKKGKGKGTTVGMGKSSRRFINMY
FT                   GFDPTEYSFIQFVDPLTGAQIEENVYADIRDIQERFSEVRKKMVENDDIEMQALGSNTT
FT                   IHAYFRKDWSDKALKIDLMPHNPLKVCDKTNGIAKFPERELELRQTGPAVEVDVKDIPA
FT                   QEVEHEAKSLMRGLRDFNPIAQTVCRLKVSVEYGTSEMYGFGFGAYIIANHHLFRSYNG
FT                   SMEVRSMHGTFRVKNLHS"
FT   mat_peptide     851..1006
FT                   /gene="6K2"
FT                   /product="6 kD protein"
FT                   /note="putative"
FT   mat_peptide     1007..1570
FT                   /gene="VPg"
FT                   /product="Genome-linked protein"
FT                   /note="This protein constitutes the N-terminal half of the
FT                   NIa protein; putative"
FT   mat_peptide     1007..1784
FT                   /partial
FT                   /gene="NIa"
FT                   /product="small nuclear inclusion protein"
FT   mat_peptide     1571..1784
FT                   /partial
FT                   /gene="NIa-Pro"
FT                   /product="protease"
FT                   /note="This protein constitutes the C-terminal region of
FT                   the NIa protein; putative"
XX
SQ   Sequence 1784 BP; 570 A; 340 C; 426 G; 448 T; 0 other;
     aaggctgggt cgtgttggac gcttcaagaa aggagtagca ttgcgcattg gacacactga        60
     gaagggaatt attgaaattc caagcatgat cgctactgag gcggcacttg cttgctttgc       120
     atataacttg ccagtgatga caggaggcgt ctcaactagt ctgattggca attgtactgt       180
     gcgccaggtt aaaacaatgc agcaatttga attgagtccc ttctttatcc agaatttcgt       240
     tgctcatgat ggatcaatgc atcctgtcat acatgacatt cttaaaaagt ataaactccg       300
     agattgtatg acacctttgt gcgatcagtc tataccatac agggcatcga gcacttggtt       360
     atcggttagt gaatatgagc gacttggagt ggccttagaa attccaaagc aagtcaaaat       420
     tgcattccat atcaaagaga tccctcctaa gctccacgaa atgctttggg aaacggttgt       480
     caagtacaaa gacgtttgct tatttccaag cattcgagca tcgtccatca gcaaaatcgc       540
     atacacattg cgtacagacc tcttcgccat cccaagaact ctaatattgg tggagagatt       600
     gcttgaagag gagcgagtga agcagagcca attcagaagt ctcatcgatg aagggtgctc       660
     aagcatgttt tcaattgtca acttgaccaa cactctcagg gccagatatg caaaagatta       720
     caccgcagac aacatacaaa aacttgagaa agtgagaagc caattaaaag aattctcaaa       780
     tttggatggt tctgcatgtg aggaaaattt aataaagagg tatgagtctt tgcagttcgt       840
     ccatcaccaa gctgcgacgt cacttgcaaa ggatctcaag ttgaagggga cttggaagaa       900
     gtcattagtg gctaaagact tgatcatagc aggcgctgtt gcaattggtg gaataggact       960
     catatatagt tggttcacac aatcagttga gactgtgtct caccaaggga aaaataaatc      1020
     caagagaatc caagccttga agtttcgcca tgctcgtgac aaaagggctg gctttgaaat      1080
     tgacaacaat gatgacacaa tagaggaatt ctttggatct gcatacagga aaaagggaaa      1140
     aggtaaaggt accacagttg gtatgggcaa gtcaagcagg aggttcatta acatgtacgg      1200
     gttcgaccca acagagtact cattcatcca attcgttgat ccactcactg gggcacaaat      1260
     agaagagaat gtctatgctg acattagaga tattcaagag agatttagtg aagtgcgaaa      1320
     gaaaatggtt gagaatgatg acattgaaat gcaagccttg ggtagtaaca cgaccataca      1380
     tgcatacttt aggaaagatt ggtctgacaa agctttgaag attgatttaa tgccacataa      1440
     cccactcaaa gtttgtgaca aaacaaatgg cattgccaaa tttcctgaga gagagctcga      1500
     actaaggcag actgggccag ctgtagaagt cgacgtgaag gacataccag cgcaggaggt      1560
     ggagcatgaa gctaaatcgc tcatgagagg cttgagagac ttcaacccaa ttgcccaaac      1620
     agtttgtagg ctgaaagtat ctgttgaata tgggacatca gagatgtacg gttttggatt      1680
     tggagcatac ataatagcga accaccattt gtttaggagt tacaatggtt ccatggaggt      1740
     gcgatccatg cacggtacat tcagggtgaa gaatctacac agtt                       1784
//