ID Z25751; SV 1; linear; genomic DNA; STD; VRL; 2777 BP. XX AC Z25751; XX DT 02-DEC-1993 (Rel. 38, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 7) XX DE Tomato yellow leaf curl Sardinia virus-[Spain1] V1, V2, C1, C2, C3 and C4 DE genes XX KW C1 gene; C2 gene; C3 gene; C4 gene; capsid protein; KW replication-associated protein; V1 gene; V2 gene. XX OS Tomato yellow leaf curl Sardinia virus-[Spain1] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2777 RX DOI; 10.1007/BF01309774. RX PUBMED; 8198442. RA Noris E., Hidalgo E., Accotto G., Moriones E.; RT "High similarity among the tomato yellow leaf curl virus isolates from the RT west Mediterranean basin: the nucleotide sequence of an infectious clone RT from Spain"; RL Arch. Virol. 135(1-2):165-170(1994). XX RN [2] RP 1-2777 RA Accotto G.; RT ; RL Submitted (24-AUG-1993) to the INSDC. RL Accotto G., Consiglio Nazionale delle Ricerche, Istituto di Fitovirologia RL Applicata, Strada delle Cacce, 73, Torino, Italy, 10135 XX DR MD5; e289859030784d8305171ff531a41413. DR EuropePMC; PMC110531; 9811744. DR EuropePMC; PMC156158; 12767999. DR EuropePMC; PMC4958995; 27453359. DR EuropePMC; PMC6036239; 30013589. DR EuropePMC; PMC6356960; 30634476. DR EuropePMC; PMC6362282; 30718735. XX FH Key Location/Qualifiers FH FT source 1..2777 FT /organism="Tomato yellow leaf curl Sardinia virus-[Spain1]" FT /strain="Murcia" FT /isolate="TYLCV-M" FT /mol_type="genomic DNA" FT /clone="pSP95" FT /db_xref="taxon:221537" FT stem_loop complement(22..2765) FT regulatory 111..116 FT /regulatory_class="TATA_box" FT CDS 149..496 FT /gene="V1" FT /db_xref="GOA:P61512" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/Swiss-Prot:P61512" FT /protein_id="CAA81024.1" FT /translation="MWDPLLNEFPDSVHGLRCMLAIKYLQLVEETYEPNTLGHDLIRDL FT ISVIRARDYAEANRRYTNFNARLEGSSKTELRQPVYQPCCCPHCPRHQASIMDLQAHVS FT KAADVQNVQKP" FT CDS 309..1082 FT /gene="V2" FT /function="capsid protein" FT /db_xref="GOA:P38608" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/Swiss-Prot:P38608" FT /protein_id="CAA81025.1" FT /translation="MPKRTGDILISTPVSKVRRKLNFDSPYTSRAAAPTVQGIKRRSWT FT YRPMYRKPRMYRMYRSPDVPFGCEGPCKVQSYEQRDDVKHTGVVRCVSDVTRGSGITHR FT VGKRFCIKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGTSPMDFGQVFNMFDNE FT PSTATVKNDLRDRYQVMRKFHATVVGGPSGMKEQCLLKRFFKVNTHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1079..1483) FT /gene="C3" FT /db_xref="GOA:P38611" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/Swiss-Prot:P38611" FT /protein_id="CAA81028.1" FT /translation="MDLRTGEYITAHQATSGVYTFEITNPLYFTITRHNQQPFNSKYNF FT LTFQIRFNHNLRKALGIHKCFLNFRIWTTLQSPTGHFLRVFRYQVYKYLNNIGVISLNN FT VIRAVDYVLFDVFENTIDVIEQHEIKYNLY" FT regulatory 1081..1086 FT /regulatory_class="polyA_signal_sequence" FT regulatory complement(1095..1100) FT /regulatory_class="polyA_signal_sequence" FT CDS complement(1224..1631) FT /gene="C2" FT /db_xref="GOA:P38610" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/Swiss-Prot:P38610" FT /protein_id="CAA81027.1" FT /translation="MQSSSPSTSHCSQIPIKIQHHIAKKRQVRRRRVDLDCGCSYYIHL FT DCINHGFTHRGVHHCASSNEWRLYLRDNKSPIFHDNQTQPTTIQQQIQFPNISNQVQPQ FT LEEGTGDSQMFSQLPHLDDLTVSDWSFFKSL" FT CDS complement(1540..2619) FT /gene="C1" FT /function="replication-associated protein" FT /db_xref="GOA:P38609" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/Swiss-Prot:P38609" FT /protein_id="CAA81026.1" FT /translation="MAQPKRFQINAKHYFLSFPKCSLSKEEALEQLLQLQTPTNKKYIK FT ICRELHEDGQPHLHMLIQFEGKFNCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDVLEWGTFQIDGRSARGGQQTANDAYAKAINAGSKSEALDVIKELAPRDYILHFH FT NINSNLDRVFQVPPAPYVSPFLSSSFDQVPDELEHWVSENVMDAAARPWRPVSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSQKVYSNNAWYNVIDDVDPHYLKHFKEFMGSQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPQSSFKEYLDEEKNQTLKNWAIKNAIFVTIHQPL FT FTNTNQDPTPHRQEETSEA" FT CDS complement(2172..2462) FT /gene="C4" FT /db_xref="GOA:P38612" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/Swiss-Prot:P38612" FT /protein_id="CAA81029.1" FT /translation="MGNLISTCSFSSRVNSTAKITDSSIWYPQPDQHISIRTFRELNQA FT PTSSPTSTRTEMFLNGVLSRSTDDLQGEDSRQPMTLTPRQLTQEVSRRLLM" FT regulatory complement(2685..2691) FT /regulatory_class="TATA_box" XX SQ Sequence 2777 BP; 750 A; 511 C; 612 G; 904 T; 0 other; taatattacc ggatggccgc gctctccgat aaagtagtgg gccctacgca ctaatttgtg 60 tcgaccaatg aaaatgcagc ctcaaagctt aaataatgta tttactttgt tataaacttg 120 gcttctaagt tttgaaaaaa ccatcaatat gtgggatcct ttattaaatg aatttccaga 180 ttcagttcat ggtctccgtt gtatgcttgc aataaaatat ttgcagctag ttgaagaaac 240 ctatgaaccc aatactctgg gtcacgatct aattagggat ctcatttccg tcattcgtgc 300 tcgtgactat gccgaagcga acaggcgata tactaatttc aacgcccgtc tcgaaggttc 360 gtcgaaaact gaacttcgac agcccgtata ccagccgtgc tgctgccccc actgtccaag 420 gcatcaagcg tcgatcatgg acttacaggc ccatgtatcg aaagccgcgg atgtacagaa 480 tgtacagaag ccctgatgtc ccctttggtt gtgaaggtcc ttgtaaagtc cagtcgtatg 540 agcagcgtga cgacgtcaag cataccggtg ttgttcgttg tgttagtgat gtaactaggg 600 gttctggtat tacacataga gtaggtaaac ggttttgtat taagtcaatc tatattttag 660 ggaagatttg gatggatgaa aatataaaaa aacaaaatca tactaaccag gtcatgttct 720 ttttagtacg agaccgaagg ccgtatggaa ctagtcctat ggattttggt caagttttta 780 acatgtttga taatgaacct agtacggcta ctgtgaagaa cgatttaagg gataggtacc 840 aagtaatgag gaagttccat gccacggtgg taggtggtcc gtcagggatg aaggagcagt 900 gtctgttgaa gaggtttttt aaagttaata cccatgtagt ttataatcat caagagcagg 960 cgaagtatga aaaccatact gagaatgcgt tgttgttgta tatggcatgt actcatgctt 1020 ctaacccagt gtatgctacg ttgaaaatac gtatctattt ttatgatgct gtaacaaatt 1080 aataaagatt gtattttatt tcatgttgtt caattacatc tattgtgttc tcaaatacat 1140 cgaataagac ataatcaact gctctaataa cattgtttaa tgaaattaca cctatattat 1200 tcaaatactt atacacttga tacctaaaga ctcttaaaaa atgaccagtc ggagactgta 1260 aggtcgtcca gatgcggaag ttgagaaaac atttgtgaat ccccagtgcc ttcctcaagt 1320 tgtggttgaa cctgatttga aatgttagga aattgtattt gctgttgaat ggttgttggt 1380 tgtgtctggt tatcgtgaaa tataggggat ttgttatctc gaaggtataa acgccactcg 1440 ttgcttgatg cgcagtgatg tactcccctg tgcgtaaatc catggtttat gcagtctaaa 1500 tgtatatagt atgaacagcc acagtccaga tctacccttc tacgcctcac ttgtctcttc 1560 ttggcgatgt ggtgttggat cttgattggt atttgtgaac aatggctggt ggatggtgac 1620 gaagattgca ttttttatgg cccaattttt taatgtttga tttttttctt cgtcgaggta 1680 ttctttaaat gatgattgtg ggcctggatt gcagaggaag atagtgggta tgcctccttt 1740 aatttgaatg ggcttcccat actttgtgtt gctttgccag tccctttggg accccatgaa 1800 ttctttaaag tgttttaaat aatgcgggtc gacgtcatca atgacgttgt accaagcatt 1860 attgctatat actttttgac tgaggtcaag atgtccgcac aaataattat gtgggcctag 1920 ggaacgggcc cacatagtct ttcctgtccg gctgtcaccc tcaatcacta tactcaccgg 1980 cctccaaggc cgcgcagcgg catccatgac gttctcggaa acccagtgtt caagttcatc 2040 cggaacttga tcaaaagaag aagataaaaa aggagaaaca tatggtgccg gaggcacctg 2100 aaaaacccta tctaaattac tatttatatt atgaaaatgt aagatgtaat ctctaggggc 2160 taattcttta attacatcaa gagcctccga cttacttcct gcgttaattg ccttggcgta 2220 agcgtcattg gctgtctgct gtcctcccct tgcagatcgt ccgtcgatct ggaaagtacc 2280 ccattcaaga acatctccgt ccttgtcgat gtaggacttg acgtcggagc ttgatttagc 2340 tccctgaatg ttcggatgga aatgtgctga tctggttggg gataccagat cgaagaatct 2400 gttatttttg cagttgaatt taccctcgaa ctgaatgagc atgtggagat gaggttgccc 2460 atcttcgtgt aattctctgc aaatcttaat gtatttttta tttgttggtg tttgtagttg 2520 aagtagttgt tctagggctt cttctttgga gagagaacat tttgggaaac ttagaaaata 2580 atgttttgca tttatttgaa aacgcttagg ctgagccatt tggtcaatgg gtaccaattg 2640 acctcagatt cattttattc catgtattgg tagattggta gctcttatat acctgtgtac 2700 taaatggcat gtatgtaaat atgttaagtt atttttttag tttattttaa tttttggaat 2760 tttagcggcc atccgtt 2777 //