Dbfetch
ID Z12818; SV 1; linear; genomic RNA; STD; VRL; 2199 BP. XX AC Z12818; S57834; XX DT 23-JUN-1992 (Rel. 32, Created) DT 13-FEB-1994 (Rel. 38, Last updated, Version 5) XX DE Cucumber mosaic virus genes for 3a protein and coat protein. XX KW 3A protein; coat protein. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [2] RP 1-2199 RA Baulcombe D.; RT ; RL Submitted (19-JUN-1992) to the INSDC. RL David Baulcombe, The Sainsbury Laboratory, Norwich Research Park, Colney RL Lane, Norwich, NR2 7UH, United Kingdom XX RN [3] RX DOI; 10.1006/viro.1993.1165. RX PUBMED; 8460476. RA Boccard F., Baulcombe D.; RT "Mutational analysis of cis-acting sequences and gene function in RNA3 of RT cucumber mosaic virus"; RL Virology 193(2):563-578(1993). XX DR MD5; 5bec13897161cf871980e66e0aad9983. DR EuropePMC; PMC112760; 10400773. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..2199 FT /organism="Cucumber mosaic virus" FT /strain="RNA3" FT /isolate="Kin" FT /mol_type="genomic RNA" FT /clone="pK3" FT /db_xref="taxon:12305" FT CDS 96..935 FT /product="3a protein" FT /db_xref="GOA:Q06938" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/Swiss-Prot:Q06938" FT /protein_id="CAA78278.1" FT /translation="MAFQGTSRTLTQQSSAASSGDLQKILFSPDAIKKMATECDLGRHH FT WMRADNAISVRPLVPQVTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE FT GSLKIYLADLGDKELSPIDGQCVTLHNHELPALISFQPTYDCPMELVGNRHRCFAVVVE FT RHGYIGYGGTTASVCSNWQAQFSSKNNNYTHAAAGKTLVLPYNRLAEHSKPSAVARLLK FT SQLNNVSSSRYLLPNVALNQNAAGHESEILNESPPFAIGSPSASRNNSFRSQVVNGL" FT CDS 1222..1878 FT /product="coat protein" FT /db_xref="GOA:Q06934" FT /db_xref="InterPro:IPR000247" FT /db_xref="InterPro:IPR023800" FT /db_xref="InterPro:IPR037137" FT /db_xref="UniProtKB/Swiss-Prot:Q06934" FT /protein_id="CAA78279.1" FT /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLKLNKT FT LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV FT SRIQIRINPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN FT NKLLYDLSEMRADIGDMRKYAVLVYSKDDNLEKDEIVLHVDVEHQRIPISRMLPT" XX SQ Sequence 2199 BP; 496 A; 511 C; 524 G; 668 T; 0 other; gtaatcttac cactttcttt cacgtcgtgt cgcgtcagtc cacgctgtgt gtgtgtgtgt 60 gttagttagt gtgtcgtgtt tagattacga aggttatggc tttccaaggt accagtagga 120 cgttaactca acagtcctcg gcggcgtcgt ctggcgactt acagaagata ttattcagcc 180 ccgatgccat caagaagatg gctactgagt gtgacctagg tcgacatcat tggatgcgcg 240 cggataacgc catctctgtc agacctctcg ttccccaagt aaccagtaac aatttattgt 300 ctttctttaa atctgggtat gatgccggtg aattgcgctc taaaggctat atgagcgttc 360 ctcaagtgct gtgtgccgtt accaggacgg tttctacgga tgctgagggt tctttgaaaa 420 tttacttggc tgacctaggt gataaagaat tatccccaat tgatgggcag tgtgttactt 480 tgcataatca tgagctccct gctttgatat ctttccaacc tacttacgat tgccccatgg 540 aattagttgg caatcggcat cgatgttttg cggtagtcgt tgagagacat ggttatattg 600 gttacggtgg taccactgct agcgtgtgta gtaactggca agctcagttt tcttcaaaga 660 ataataatta cacacacgcc gctgctggta agactcttgt gttgccttac aacagattag 720 ctgagcattc gaaaccgtca gccgtcgctc gcctgttgaa gtcgcagtta aacaacgtta 780 gctcatcgcg ttatcttttg ccgaacgttg ctcttaatca aaatgcggct gggcacgagt 840 ccgagatttt aaacgaaagc cctcccttcg ctatagggag tccgtccgcg tcccgtaaca 900 atagcttcag atcgcaggtg gttaacggtc tttagtgttt tgttacgttg tacctatgta 960 tatatatact acgtttatct tccgtatgta aatacatgtg agtctagagt cccgtgtgag 1020 ttgtaacggt agacatctgt gacgcgaagt cgcttgaaga tttcccatct ggggttagta 1080 agtccacatc acagttttaa ggttcaattc cttttgctcc ctgttgggcc ccttactttc 1140 tcatggatgc ttctccgcga gttagcgttt agttgttcac ttgagtcgtg tgtttctttg 1200 ttttcgcgtc ttagtgtacc tatggacaaa tctggatctc ccaatgctag tagaacctcc 1260 cggcgtcgtc gcccgcgtag aggttctcgg tccgcttctg gtgcggatgc agggttgcgt 1320 gctttgactc agcagatgct gaaactcaat aaaaccctcg ccattggtcg tcccactctt 1380 aaccacccaa ccttcgtggg tagtgaaagt tgtaaacccg gttacacttt cacatctatt 1440 accctgaaac cgcctgaaat tgagaaaggt tcatattttg gtagaaggtt gtctttgcca 1500 gattcagtca cagactatga taagaagctt gtttcgcgca ttcaaatcag gattaatcct 1560 ttgccgaaat ttgattctac cgtgtgggtt acagttcgga aagtaccttc atcatccgat 1620 ctttccgtcg ccgccatctc tgctatgttt ggcgatggta attcaccggt tttggtttat 1680 cagtatgctg cgtccggagt tcaggccaac aataagttac tttatgacct gtccgagatg 1740 cgtgctgata tcggcgacat gcgtaagtac gccgtcctgg tttactcgaa agacgataat 1800 ctagagaagg acgagattgt acttcatgtc gacgtcgagc atcaacgaat tcctatctca 1860 cggatgctcc cgacttagtc cgtgtgttta ccggcgtccg aagacgttaa actacactct 1920 caatcgcgag tgctgagttg gtagtattgc tccaaactgc ctgaagtccc taaacgtgtt 1980 gttgcgcggg gaacgggttg tccatccagc ttacggctaa aatggtcagt cgtgtctttc 2040 acacgccgat gtcttacaag atgtcgaggt acccttgaaa tcatctccta gatttcttcg 2100 gaagggcttc gtgagaagct cgtgcacggt aatacactga tattaccaag agtgcgggta 2160 tcgcctgtgg ttttccacag gttctccata aggagacca 2199 //