ID Y17873; SV 1; linear; genomic RNA; STD; VRL; 2375 BP. XX AC Y17873; XX DT 07-JAN-1999 (Rel. 58, Created) DT 26-MAR-2003 (Rel. 75, Last updated, Version 3) XX DE Thogoto virus genomic RNA for PB2 polymerase subunit XX KW PB2 polymerase. XX OS Thogoto thogotovirus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Thogotovirus. XX RN [1] RX DOI; 10.1007/s007050050613. RX PUBMED; 10486113. RA Weber F., Gruber S., Haller O., Kochs G.; RT "PB2 polymerase subunit of Thogoto-Orthomyxovirus"; RL Arch. Virol. 144(8):1601-1609(1999). XX RN [2] RP 1-2375 RA Weber F.; RT ; RL Submitted (05-AUG-1998) to the INSDC. RL F. Weber, Institute of Med. Microbiology and Hygiene, Department of RL Virology, Hermann-Herder-Str. 11, D-79008 Freiburg, FRG XX DR MD5; 23d99be40c33b7bcbea5e626484032eb. DR EuropePMC; PMC114495; 11533190. XX FH Key Location/Qualifiers FH FT source 1..2375 FT /organism="Thogoto thogotovirus" FT /segment="1" FT /strain="SiAr 126" FT /mol_type="genomic RNA" FT /clone_lib="pGEM-7" FT /db_xref="taxon:11569" FT CDS 15..2324 FT /product="PB2 polymerase subunit" FT /db_xref="GOA:Q9YNA4" FT /db_xref="InterPro:IPR001591" FT /db_xref="PDB:4CHD" FT /db_xref="PDB:4CHE" FT /db_xref="PDB:4CHF" FT /db_xref="UniProtKB/Swiss-Prot:Q9YNA4" FT /protein_id="CAA76908.1" FT /translation="MDREEPAESECTLRALVEEYNGACKEAPKEMSKQFTDYNTFKRYT FT TSKKDHAPQMRLVYSVRKPWPISMTPSKEIPLVFNGTKLKDTILDLGESKRTRANIVVP FT DYWSKYGSQTSLEVVNAILYAEDLKVQRFFSTEWGEIRYGRMLPFRKPVQACPTIEEVN FT PASIPHTLLQVFCPQYTTLDSKRKAHMGAVEKLKRVMEPICKVQTQESAVHIARSLIDS FT NKKWLPTVVDHTPRTAEMAHFLCSKYHYVHTNTQDLSDTRSIDNLCGELVKRSLKCRCP FT KETLVANLDKITIQGRPMREVLADHDGELPYLGICRVAMGLSTHHTMKIRSTKFSILNS FT DHPRIEVKKVFSLSPDVQVTIPYRRFKGKAKVYFQNDQIQGYFSCTDRQIDEIKISAPK FT NAPLLEPLLDICYYGSFIEPGFEQTFGFYPAGKREFVDSFFMHHSKDHKAFLIHMGLDK FT DLSLPLSPELNWKEPALSKVCRVTELDSTVQPYTSATREFVLGETLNVYTQHENGLELL FT ICPTEIRSTRGPLPPGTNLSGSEFIDIYQDPFSRAKSLLKSTILHAERCKEFVGNMLEE FT YQDPAETTVQSLVPINTWGKSAKRKLQEEITSDPDWHQCPRKRAKMSYLAIIAGSIQDR FT DKKQTNVPRAFMLRGSQIEYDMKATRGLVVDTTNRIIVGGETVLREGKGGPEGYVQTGV FT FEEQPRCYLVDTPDHGLSMGLSRFCVHSQGRYFQYEKKISIWEETDNIKATIDSQRDLK FT RRRDIEEMVSKRARIV" FT regulatory 2345..2350 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 2375 BP; 761 A; 571 C; 580 G; 463 T; 0 other; agcaaaaaca agcgatggac agagaagaac ccgcggaatc agagtgcacc ttaagagctc 60 ttgtagaaga gtacaatgga gcatgcaagg aagcaccgaa agagatgtcg aagcaattca 120 cagactacaa cacattcaaa aggtatacca caagcaagaa ggatcatgca ccccagatga 180 gactagtgta ttcagtgaga aaaccatggc caatcagcat gactcccagc aaggagatcc 240 ctctggtgtt caacgggacc aaactaaaag atactatcct ggacctagga gaatccaaga 300 gaaccagggc aaacatagta gtaccagatt actggtccaa gtacggaagc cagaccagcc 360 tagaagtagt taacgccatt ctatatgcgg aagacttgaa agtacagaga tttttcagca 420 cagaatgggg tgagatccgc tacggaagaa tgctcccctt cagaaagcct gtacaggcat 480 gtcccactat agaggaggta aatccggctt ctataccaca tactctgctg caagtgttct 540 gcccccaata caccactcta gacagcaaga ggaaagcaca catgggagca gtagagaagc 600 tgaaaagagt catggaaccc atttgtaagg tgcagacaca agaatctgca gtacacattg 660 ccagatctct tattgacagc aacaaaaagt ggctgcccac cgttgtagac cacaccccca 720 ggactgctga gatggcacat ttcttgtgca gcaaatatca ctatgtgcat accaacacac 780 aagatctaag cgacacgcgc tccatagaca atctatgcgg agaacttgtg aagagatctc 840 tgaagtgcag atgcccaaag gagactctgg tcgccaacct agacaagatc accatacaag 900 ggagaccgat gagggaagtg cttgctgacc acgatgggga gctcccctac ctgggaatat 960 gccgagtggc tatgggtctc agtacacacc acacaatgaa gattaggagc accaagttct 1020 ctatccttaa cagtgaccac cctcgcattg aggtgaaaaa ggtcttctca ttgagcccgg 1080 atgtgcaagt gaccatacct tataggagat tcaaagggaa agcgaaggtc tatttccaaa 1140 acgaccagat tcaaggatat ttcagctgca cagacaggca gatagatgag atcaagatta 1200 gtgcccccaa gaacgcaccc ctactagaac ccctacttga catctgctac tatggatcct 1260 tcatagaacc gggctttgaa cagaccttcg gattttaccc agccggaaag agagaatttg 1320 tggacagttt cttcatgcat cactccaaag accacaaggc cttcttgatc cacatgggcc 1380 ttgacaagga tctgagcctc cctctgtcac cagaactcaa ttggaaagag ccagctctta 1440 gcaaagtctg ccgtgtgaca gagctagaca gcaccgtaca gccgtacacc tctgccacta 1500 gagagtttgt gctgggagaa acgctcaatg tatacaccca acatgagaat ggacttgaac 1560 tgctcatatg ccccacagag ataaggagta cgagaggtcc tcttcctcca ggaaccaacc 1620 tgagcggcag tgaattcata gatatatacc aagacccttt cagcagagcc aaaagcctgc 1680 tgaagtccac catactgcac gcagagagat gcaaagagtt cgttggcaac atgctcgaag 1740 agtaccaaga ccctgcagag acgaccgtgc aaagtctagt gcccattaac acttggggga 1800 aaagtgccaa gagaaagcta caagaggaaa tcaccagcga tccagactgg caccagtgtc 1860 caagaaagcg agcaaagatg tcttaccttg ctataatagc aggtagtatc caagacagag 1920 acaagaagca aacaaatgtt cctcgggctt tcatgcttag gggatcgcaa atagagtacg 1980 acatgaaagc caccagaggg cttgtggtgg acaccaccaa taggatcata gtagggggtg 2040 aaacagtcct gagagagggc aaaggagggc ccgaagggta tgtccaaaca ggggtgtttg 2100 aggagcaacc caggtgctac ctagtagaca ctccagacca cggattgtcg atgggcctct 2160 ccagattctg tgtacactct caaggtcggt actttcaata cgagaagaag atctctatat 2220 gggaggagac cgacaacatc aaagcgacta tcgactccca gagggacctg aagagaagga 2280 gggatataga ggagatggtc agcaagaggg caaggattgt gtagtcgcag aacgggagta 2340 cagctttttt cttgaaaaat cgccttgatt tctct 2375 //