ID   Y16926; SV 1; linear; genomic RNA; STD; VRL; 2220 BP.
XX
AC   Y16926;
XX
DT   24-FEB-2000 (Rel. 62, Created)
DT   24-FEB-2000 (Rel. 62, Last updated, Version 1)
XX
DE   Cucumber mosaic cucumovirus RNA3 3a gene and gene encoding coat protein
XX
KW   3A gene; 3A protein; coat protein.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RA   Barbarossa L.;
RT   ;
RL   Unpublished.
XX
RN   [2]
RP   1-2220
RA   Barbarossa L.;
RT   ;
RL   Submitted (19-MAR-1998) to the INSDC.
RL   L. Barbarossa, Centro di Studio sui Virus e le Virossi delle Colture
RL   Mediterranee and Dip. di, Protezioine delle Piante dalle Malattie, Univ.
RL   Bari, Via Amendola n.165/A Bari, ITALY
XX
DR   MD5; ad8cc58e5e6f35c35609611c2ed3a51b.
DR   EuropePMC; PMC110906; 11044076.
DR   EuropePMC; PMC136033; 11884564.
DR   EuropePMC; PMC3550734; 23637513.
DR   EuropePMC; PMC3550809; 23730005.
DR   EuropePMC; PMC416521; 15163757.
DR   EuropePMC; PMC4188193; 25674612.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2220
FT                   /organism="Cucumber mosaic virus"
FT                   /chromosome="RNA3"
FT                   /host="tomato"
FT                   /strain="Tfn"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12305"
FT   CDS             122..973
FT                   /gene="3a"
FT                   /product="3a protein"
FT                   /db_xref="GOA:Q9IR75"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IR75"
FT                   /protein_id="CAB75955.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELSSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYVLTNAKINQNARSESEELNVESPPIAIGSSSASRSETFRPQVVNGTLL
FT                   FS"
FT   CDS             1261..1917
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9YJR9"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YJR9"
FT                   /protein_id="CAB75956.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2220 BP; 510 A; 521 C; 537 G; 652 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtgtcg cgtcgtgtcg agtcgtgttg        60
     tccgcacatt tgagtcgtgc tgtccgcaca ttttcttttc agtgtgttag attcccgagg       120
     tatggctttc caaggtacca gtaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgaacttcaa aagatattat ttagccctga agccattaag aagatggcta ctgagtgtga       240
     cctaggccgg catcattgga tgcgcgctga taatgctatt tcagtccggc ccctcgttcc       300
     cgaagtaacc catggtcgta ttgcttcttt ctttaagtct ggatatgatg ctggtgaatt       360
     aagctctaaa ggatatatga gcgttcctca agtgttgtgt gctgttactc gaacagtttc       420
     caccgacgct gagggatctt tgagaattta cctagctgat ttaggcgaca aggagttatc       480
     tcctatagat ggacagtgcg tcacattaca taaccatgat ctacccgctt tagtgtcttt       540
     ccaaccgacg tatgattgtc ctatggaaac tgttgggaat cgtaagcggt gttttgctgt       600
     tgttatcgaa agacatggtt atattgggta taccggcacc acagctagcg tgtgtagtaa       660
     ttggcaagca cggttttctt ctaagaataa caactacact cacatcgcag ctgggaagac       720
     tctagtactg ccattcaaca gattagctga gcaaacgaaa ccgtcagccg tcgctcgcct       780
     gttgaagtcg caattgaaca acatagaatc ttcgcaatac gttttaacga atgcgaagat       840
     caatcagaat gcgcgcagtg agtccgagga attaaatgtt gagagccctc ccatcgcaat       900
     cgggagttct tccgcgtccc gctccgaaac cttcagaccg caggtggtta acggtacttt       960
     actgttttcg tagcgtttta gtatataagt atatgtgagt ctgtacataa tactatatct      1020
     atagtgtcct gtgtgagttg atacagtaga catctgtgac gcgatgttgt gttgagaaga      1080
     gagcacatct ggttttagta aacccacaac atatctttga ggttcaattc ctctcgttcc      1140
     ctgttgggcc cctttacttt ttcatggatg cttctccacg agattgcgtt tcgtctactt      1200
     atcctaagag tattgtgctg tgttttctct ttgtgtagta gaatcaagtc gagtcgagtc      1260
     atggacaaat ctgaatcaac cagtgccggt cgtaatcgtc gacgtcgtcc gcgtcgtggt      1320
     tcccgctccg ctccctcctc cgcggatgct aactttagag tcttgtcgca gcagctttcg      1380
     cgacttaata agacgttagc agctggtcgt ccaactatta accacccaac ctttgtgggt      1440
     agtgaacgct gtaaacctgg gtacacgttc acatctatta ccctgaagcc gccgaaaata      1500
     gaccgcgggt cttattatgg taaaaggttg ttgctacctg attcagtcac ggagttcgat      1560
     aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt tgattctacc      1620
     gtgtgggtga cagtccgtaa agttcctgcc tcctcggact tatccgttgc cgctatctct      1680
     gctatgtttg cggacggagc ctcaccggta ctggtttatc agtatgctgc atccggcgtt      1740
     caagccaaca acaaattgtt gtacgatctt tcggcgatgc gcgctgatat tggcgacatg      1800
     agaaagtacg ccgtcctcgt gtattcaaaa gacgatgcgc tcgagacgga cgagttggta      1860
     cttcatgttg acatcgagca ccaacgcatt cccacatctg gggtgctccc agtttgaatc      1920
     cgtggttttc ccagaatcct ccctccggtc ttgtggcggg agctgagttg gtagtgttac      1980
     tataaactgc ctgaagtcac taaacgcttt gcggtgaacg ggttgtccgt ccagcttacg      2040
     gctaaaatgg tcagtcgtgg agaaatccac gccagtagac ttacaagtct cggaggtgcc      2100
     tttgaaacca tctcctaggt ttcttcggaa ggacttcggt ccgtgtactt ctagcacaag      2160
     gtgctagttt tagggtacgg gcatcccccc acttcagtgg gggtctctta aaggagacca      2220
//