ID Y15934; SV 1; circular; genomic DNA; STD; VRL; 2746 BP. XX AC Y15934; XX DT 28-JAN-1998 (Rel. 54, Created) DT 19-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Papaya leaf curl virus AV1, AV2, AC1, AC2, AC3, AC4, AC5 genes and IR DE region XX KW circular DNA; coat protein; complete genome; precoat protein; replicase. XX OS Papaya leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RA Saxena S., Hallan V.; RT ; RL Unpublished. XX RN [2] RP 1-2746 RA Saxena S.; RT ; RL Submitted (17-DEC-1997) to the INSDC. RL S. Saxena, National Botanical Research Institute, S.R.F. Plant Virus Lab., RL N.B.R.I., Rana Pratap Marg., Lucknow 226001, INDIA XX DR MD5; 2e95bf549d8769045c4d5ae130a3be7e. DR EuropePMC; PMC110531; 9811744. XX FH Key Location/Qualifiers FH FT source 1..2746 FT /organism="Papaya leaf curl virus" FT /mol_type="genomic DNA" FT /clone_lib="PLCVAI, PLCVAII, PLCVAIII" FT /db_xref="taxon:53260" FT misc_feature join(2615..2746,1..35) FT /note="Intergenic region (circular DNA)" FT CDS 150..506 FT /gene="AV2" FT /product="Pre-coat" FT /db_xref="GOA:O56988" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:O56988" FT /protein_id="CAA75883.1" FT /translation="MWDPLLNEFPETVHGFICMLAVKYLQLLKKTYSPDTLGYDLFRDL FT ISVIRARNYVEATSRYIHFHARFEGTPPSQLRQPVCEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCP" FT CDS complement(301..618) FT /gene="AC5" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:O56994" FT /protein_id="CAA75889.1" FT /translation="MGQPISTSNITNTHNFTYMLNVMSRLKRLDLTWAFTSSRDIWTSV FT HPVHPGLSVHGPVRPCFCFGDADNGGSSTAHIRAVEVETAAYLRSGRGNEYICWSLRHN FT F" FT CDS 310..1080 FT /gene="AV1" FT /product="Coat protein" FT /db_xref="GOA:O56989" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:O56989" FT /protein_id="CAA75884.1" FT /translation="MSKRPADIFISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCISDVTRGNGLTHR FT VGKRFCVKSVNVLGKIWMDENIKTKDHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1077..1481) FT /gene="AC3" FT /product="replicase-associated" FT /db_xref="GOA:O56992" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:O56992" FT /protein_id="CAA75887.1" FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHHNRPFTMKEDI FT IKVQIQFNYNLRKALGMHKCFLVYRIWMTSQPQTGRFLGVFKTQVLKYLDNLGVNSINN FT VIRSVDHVLWDVLQHIVYVEQSYSIKFNIY" FT CDS complement(1222..1626) FT /gene="AC2" FT /product="replicase-associated" FT /db_xref="GOA:O56991" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:O56991" FT /protein_id="CAA75886.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKRNRRRRVDLPCGCSYFIALA FT CHNYGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRTPQPSIHNERRHNQSPNTVQLQP FT EESVGDAQMFSSLPNLDDFTASDWSFLRGL" FT CDS complement(1529..2614) FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:O56990" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:O56990" FT /protein_id="CAA75885.1" FT /translation="MPRLNSFCVNAKNIFLTYPKCPIPKEQMLEILQSINCPSDKLFIR FT VAQEKHQDGSLHIHALIQFKGKSKFRNTRHFDVTHPNNSTQFNPNFQGAKSSSDVKSYI FT EEDSDYIDWGQFQIDGRYGRGGQQTANDAAAEALNAGSADAALAINREKLPKDFIFQYH FT NLKCNLDRIFTPPVEVYVSPFLSSSFNQVPEELEEWAVENVMGAAARTLRPMSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALKNWALKNAIFVTLEGPL FT YSGSNQSAAQASQEEEQTSSC" FT CDS complement(2200..2457) FT /gene="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:O56993" FT /protein_id="CAA75888.1" FT /translation="MGLCISMPSSSSKVNPSSETPDISMSLTLITPPNSTQTSRELSPA FT LMSSPTSRRTVITSTGVSFRSMEDMVEEVNRQLMMQQQRP" XX SQ Sequence 2746 BP; 772 A; 530 C; 593 G; 851 T; 0 other; taatattacc ggatggccgc gatttcttta gtgggccctt aacgcattaa ctgacaagga 60 catgcgaacc aatcatatga cacgctcaaa gcctaattgt tttttggtcc cttatttaaa 120 cttcgtcccc aagtattttc ttttgcacta tgtgggatcc attgttgaac gagtttcccg 180 aaaccgtcca cggttttata tgtatgttag cagttaaata tctgcagtta ttaaaaaaga 240 cttattctcc tgacacatta ggttacgatt tatttaggga tttaatttca gttattaggg 300 ctagaaatta tgtcgaagcg accagcagat atattcattt ccacgcccgc ttcgaaggta 360 cgccgccgtc tcaacttcga cagcccgtat gtgagccgtg ctgctgcccc cattgtccgc 420 gtcaccaaag caaaagcatg ggcgaacagg cccatgaaca gaaagcccag gatgtacagg 480 atgtacagaa gtccagatgt ccctagagga tgtgaaggcc catgtaaggt ccagtctttt 540 gagtctagac atgacattca gcatataggt aaagttatgt gtattagtga tgttactcgt 600 ggaaatgggc tgacccatag agttggtaag cgtttttgtg ttaagtctgt taatgttttg 660 ggcaagatct ggatggatga aaatattaag actaaggatc acacgaatag tgtgatgttc 720 tttttagtta gggatcgtag acctgtagat aaaccacaag attttggaga ggtatttaac 780 atgtttgata atgagcccag tacggctact gtgaagaatg ttcatcgtga taggtatcaa 840 gttcttcgga aatggcatgc aactgttacg ggtggacaat atgcgtcaaa ggaacaagcc 900 ctcgtgaaga agtttgttag ggttaacaat tatgttgtat ataaccagca agaagctggc 960 aagtatgaga atcattctga gaatgcgtta atgttgtata tggcatgtac tcatgcctct 1020 aacccagtgt atgctacttt gaagatacgg atctatttct atgattccgt aacaaattaa 1080 taaatattaa attttattga atatgattgt tctacatata caatgtgttg taatacatcc 1140 cataaaacat gatcaactga tctgattaca ttattaatac tgttaactcc taaattatct 1200 aaatatttta aaacttgagt cttaaagacc cctaagaaac gaccagtctg aggctgtgaa 1260 gtcatccaga ttcggtagac tagaaaacat ttgtgcatcc ccaacgcttt cctcaggttg 1320 tagttgaact gtatttggac tttgattatg tcttctttca ttgtgaatgg acggttgtgg 1380 tgttctgtta tcttgaaata caggggattt tgaatctccc agataaacac gccattctct 1440 gcttgagctg cagtgatgag ttcccctgtg cgtgaatcca taattgtgac aggctagtgc 1500 tatgaaatat gaacatccac aagggagatc aacacgacga cgtctgttcc tcttcttggc 1560 tagcctgtgc tgcactttga ttggaacctg agtagagtgg gccttcgagg gtgacgaaga 1620 tcgcattctt taaagcccaa tttttcagtg cgttattttt ctcttcgtcc aagaactctt 1680 tatagcttga gttgggtcct ggattgcaga ggaagatagt gggtattcct cctttaattt 1740 gaactggctt tccgtacttt gtatttgatt gccagtccct ttgggccccc atgaattcct 1800 taaagtgctt taaataatgc ggatcgacgt catcaatgac gttgtaccag gcatcattat 1860 tgtagacctt aggactaagg tctaagtgac cacacagata attatgtgga cccaaagacc 1920 tagcccacat cgtctttcct gttctactat caccctctat gacaatactc atgggtctca 1980 aagtccgcgc agcggcaccc attacattct caacagccca ttcttcaagt tcttcaggaa 2040 cttgattaaa agaagaagat aaaaaaggag aaacataaac ctctacagga ggtgtaaaaa 2100 tcctatctaa attacatttt aaattatgat attgaaaaat aaaatcttta gggagttttt 2160 ccctatttat tgctaaagct gcgtcagctg aacctgcatt tagggcctct gctgctgcat 2220 cattagctgt ctgttgacct cctcgaccat atcttccatc gatctgaaac tgaccccagt 2280 cgatgtaatc actgtcctcc tcgatgtagg acttgacatc agagctggac ttagctccct 2340 ggaagtttgg gttgaattgg gtggagttat tagggtgagt gacatcgaaa tgtctggtgt 2400 ttctgaactt ggatttacct ttgaactgga tgagggcatg gatatgcaga gacccatctt 2460 ggtgtttttc ttgtgccact ctgataaata atttatcaga tgggcaattt attgactgaa 2520 gaatctcgag catttgctct ttgggtattg ggcattttgg ataagtgagg aagatatttt 2580 tggcattaac acaaaaagag ttaagacgag gcatattgaa ttggggacac tcaaaactct 2640 gaggaatggg ggactctggg gacgcattta tatggtgtcc ccaaatggct ttttcgtaat 2700 tttgaaagaa aattcaaaat tcaaaatccc aaagcggcca tccgta 2746 //