ID   Y14123; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   Y14123;
XX
DT   08-JAN-1998 (Rel. 54, Created)
DT   08-JAN-1998 (Rel. 54, Last updated, Version 1)
XX
DE   Potato A potyvirus RNA for helper component proteinase, partial, isolate M
XX
KW   HC-Pro gene; helper component proteinase.
XX
OS   Potato virus A
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RA   Rajamaeki M., Andreeva L., Merits A., Rabenstein F., Paulin L., Kreuze J.,
RA   Forster R.L.S., Valkonen J.P.T.;
RT   ;
RL   Unpublished.
XX
RN   [2]
RP   1-1374
RA   Merits A.;
RT   ;
RL   Submitted (30-JUN-1997) to the INSDC.
RL   A. Merits, University of Helsinki, Institute of Biotechnology, Viikki
RL   Biocentre 1, P.O.Box 56, FIN-00014, FINLAND
XX
DR   MD5; f438e90f998e7a510a9ee542cc2bd371.
XX
CC   Related sequence:Z21670
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Potato virus A"
FT                   /host="Solanum tuberosum"
FT                   /lab_host="Nicotiana tabacum"
FT                   /isolate="M"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12215"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /gene="HC-Pro"
FT                   /product="helper component proteinase"
FT                   /db_xref="GOA:O56997"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:O56997"
FT                   /protein_id="CAA74555.1"
FT                   /translation="YSTGDVFWRGFNRTFLENKPINLDHVCSSDFSVEECGSIAALICQ
FT                   SLLPCGKITCRACAAKNLNMDEDTFKEFQTQRAREISAVIISKYPNFACVSQFIDRYFS
FT                   HQRVLNPNVNAYREILKIVGGFTQSPYTHIQELNEILVLGGRATPEQLSSASAHLLEIT
FT                   RFVRNRTDNIKKGSLALFRNKISAKAHVNTALMCDNQLDRNGNLIWGERGYHAKRFFSN
FT                   YFDIITPGGGYKQYIERRVPNGIRKLAIGNLIVTTNLGALREQLEGESIEKKAVTKACV
FT                   SMSDNNYKYPCCCVTLDDGTPLYSTFIMPTKNHLVIGNSGDPKFLDLPTDISTQMYIAK
FT                   SGYCYINIFLAMLVNVDESDAKDFTKKVRDITVPDLGEWPTLIDVATSCSLLSAFYPAT
FT                   SAAELPRILVDHDLKTMHVIDSYGSLNTGYHVLKANTVRQLIQFASNSLDSEMKHYRVG
FT                   "
XX
SQ   Sequence 1374 BP; 445 A; 279 C; 302 G; 348 T; 0 other;
     tattcaacag gggatgtttt ctggcgagga ttcaatcgaa cctttttaga gaacaagcca        60
     atcaatctag atcatgtgtg ttcttcagac ttttctgtag aagaatgtgg atctatagcg       120
     gcactgattt gccaatcact actaccatgt ggcaaaataa catgccgagc gtgtgcagca       180
     aagaatctga acatggatga ggacaccttc aaagagttcc agacacaaag agctcgggaa       240
     ataagcgcag ttattataag caagtatccg aactttgcat gtgtctctca gttcattgat       300
     cgatattttt cacatcagag ggtattaaat cccaatgtta acgcatatag agaaatattg       360
     aagatagttg gcggcttcac gcaatcacca tacacacaca tacaggagct caatgaaata       420
     ttggtcttgg gtggcagagc aactcctgaa caattaagct ccgcatcagc acacttgcta       480
     gagataacaa ggttcgttag gaacagaacg gacaacataa agaagggctc actagccctg       540
     tttaggaaca agatctcagc aaaagcacat gtaaacacag ctttaatgtg tgacaaccag       600
     ctagatagga atggtaactt aatatggggc gagagagggt atcatgccaa gagattcttc       660
     tcaaattact tcgatatcat tacaccggga ggtgggtaca agcagtatat tgagagaaga       720
     gttccaaatg gaatcagaaa acttgccatc ggaaatctca tagttaccac aaacctagga       780
     gctctgcgag agcaactaga aggggagtcg attgagaaga aggctgtcac aaaggcttgt       840
     gttagcatga gcgataacaa ttataaatac ccatgctgct gcgttacatt ggatgatggc       900
     actccactgt attcaacgtt tattatgcca accaagaacc atcttgtaat tggtaactca       960
     ggtgacccaa agttcctaga cttgcccaca gacattagca cacaaatgta catagccaaa      1020
     tcaggatact gttacataaa tatattcctg gctatgcttg tgaatgtgga tgagtctgat      1080
     gccaaagact tcactaagaa ggttagagac atcacagtgc cagatctagg cgagtggcca      1140
     actcttattg atgtggcaac aagttgcagt ctacttagtg cattttatcc tgctacaagt      1200
     gccgctgagt tgccaagaat tctggttgat cacgatctca aaacaatgca cgtgattgat      1260
     tcttatggct cactcaacac aggatatcat gtactaaagg cgaatacagt tcggcaattg      1320
     atccaatttg cgagcaactc actagactct gaaatgaagc actacagggt tgga            1374
//