ID   Y14122; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   Y14122;
XX
DT   08-JAN-1998 (Rel. 54, Created)
DT   08-JAN-1998 (Rel. 54, Last updated, Version 1)
XX
DE   Potato A potyvirus RNA for helper component proteinase, partial, isolate
DE   Can
XX
KW   HC-Pro gene; helper component proteinase.
XX
OS   Potato virus A
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RA   Rajamaeki M., Andreeva L., Merits A., Rabenstein F., Paulin L., Kreuze J.,
RA   Forster R.L.S., Valkonen J.P.T.;
RT   ;
RL   Unpublished.
XX
RN   [2]
RP   1-1374
RA   Merits A.;
RT   ;
RL   Submitted (30-JUN-1997) to the INSDC.
RL   A. Merits, University of Helsinki, Institute of Biotechnology, Viikki
RL   Biocentre 1, P.O.Box 56, FIN-00014, FINLAND
XX
DR   MD5; c0d0519a0c4777419239a536329ddc08.
XX
CC   Related sequence:Z21670
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Potato virus A"
FT                   /host="Solanum tuberosum"
FT                   /lab_host="Nicotiana tabacum"
FT                   /isolate="Can"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12215"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /gene="HC-Pro"
FT                   /product="helper component proteinase"
FT                   /db_xref="GOA:O56996"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:O56996"
FT                   /protein_id="CAA74554.1"
FT                   /translation="YSTGDVFWRGFNRTFLENKPINLDHVCSSDFSIEECGSIAALICQ
FT                   SLLPCGKITCRACAAKNLNMDEDTFKEFQTQRAREISAVIISKYPNFACVSQFIDRYFS
FT                   HQRVLNPNVNAYREILKIVGGFTQSPYTHIQELNEILVLGGRATPEQLSSASAHLLEIT
FT                   RFVRNRTDNIKKGSLALFRNKISAKAHVNTALMCDNQLDRNGNLIWGERGYHAKRFFSN
FT                   YFDIITPGGGYKQYIERRVPNGIRKLAIGNLIVTTNLEALREQLEGESIEKKAVTKACV
FT                   SMSDNNYKYPCCCVTLDDGTPLYSTFIMPTKNHLVIGNSGDPKFLDLPTDISTQMYIAK
FT                   SGYCYINIFLAMLVNVDESDAKDFTKKVRDIIVPDLGEWPTLIDVATSCSLLSAFYPAT
FT                   SAAEFPRILVDHDLKTMHVIDSYGSLNTGYHVLKANTVRQLIQFASNSLDSEMKHYRVG
FT                   "
XX
SQ   Sequence 1374 BP; 446 A; 278 C; 300 G; 350 T; 0 other;
     tattcaacag gggatgtttt ctggcgagga ttcaatcgaa cctttttaga gaacaagcca        60
     atcaatctag atcatgtgtg ttcttcagac ttttctatag aagaatgtgg atctatagcg       120
     gcactgattt gccaatcact actaccatgt ggcaaaataa catgccgagc gtgtgcagca       180
     aagaatctga acatggatga ggacaccttc aaagagttcc agacacaaag agctcgggaa       240
     ataagcgcag ttattataag caagtatccg aactttgcat gtgtctctca gttcattgat       300
     cgatattttt cacatcagag ggtattaaat cccaatgtta acgcatatag agaaatattg       360
     aagatagttg gcggcttcac acaatcgcca tacacacaca tacaggagct caatgaaata       420
     ttagtcttgg gtggcagagc aactcctgaa caattaagct ccgcatcagc acacttgcta       480
     gagataacaa ggttcgttag gaacagaacg gacaacataa agaagggctc actagccctg       540
     tttaggaaca agatctcagc aaaagcacat gtaaacacag ctttaatgtg tgacaaccag       600
     ctagatagga atggtaactt gatatggggc gagagagggt atcatgccaa gagattcttc       660
     tcaaattact tcgatatcat tacaccggga ggtgggtaca agcagtatat tgagagaaga       720
     gttccaaatg gaatcagaaa acttgccatc ggaaatctca tagttaccac aaacctagag       780
     gctctgcgag agcaactaga aggggagtcg attgagaaga aggctgtcac aaaggcttgt       840
     gttagcatga gcgataacaa ttataaatac ccatgctgct gcgttacatt ggatgatggc       900
     actccactgt attcaacgtt tattatgcca accaagaacc atcttgtaat tggtaactca       960
     ggtgacccaa agttcctaga cttgcccaca gacattagca cacaaatgta catagccaaa      1020
     tcaggatact gttacataaa tatattcctg gctatgcttg tgaatgtgga tgagtctgat      1080
     gccaaagact tcactaagaa ggttagagac atcatagtgc cagatctagg cgagtggcca      1140
     actcttattg atgtggcaac aagttgcagt ctacttagtg cattttatcc tgctacaagt      1200
     gccgctgagt ttccaagaat tctggttgat cacgatctca aaacaatgca cgtgattgat      1260
     tcttatggct cactcaacac aggatatcat gtactaaagg cgaatacagt tcggcaattg      1320
     atccaatttg cgagcaactc actagactct gaaatgaagc actacagggt tgga            1374
//