ID Y13463; SV 1; linear; genomic RNA; STD; VRL; 3803 BP. XX AC Y13463; XX DT 20-JUN-1997 (Rel. 52, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Galinsoga mosaic virus, complete genome XX KW capsid protein; complete genome; movement protein; replicase. XX OS Galinsoga mosaic virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Gallantivirus. XX RN [1] RX DOI; 10.1007/s007050050277. RX PUBMED; 9505975. RA Ciuffreda P., Rubino L., Russo M.; RT "Molecular cloning and complete nucleotide sequence of galinsoga mosaic RT virus genomic RNA"; RL Arch. Virol. 143(1):173-180(1998). XX RN [2] RP 1-3803 RA Russo M.; RT ; RL Submitted (29-MAY-1997) to the INSDC. RL M. Russo, Centro Studi del CNR sui Virus e le Virosi della Colture RL Mediterranee, Via Amendola 165/A, I70126 Bari, ITALY XX DR MD5; 520a71132127eee65357b92d0d3510eb. DR EuropePMC; PMC112128; 10864632. DR EuropePMC; PMC1421387; 16524473. XX FH Key Location/Qualifiers FH FT source 1..3803 FT /organism="Galinsoga mosaic virus" FT /lab_host="Nicotinana tabacum" FT /mol_type="genomic RNA" FT /db_xref="taxon:60714" FT CDS 43..672 FT /product="replicase" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:O12300" FT /protein_id="CAA73862.1" FT /translation="MGAISKISKISSFVVAGIVAYKVGKATYNAFRYRNQESITAARDL FT QAAVEAVEEQPEFGSVEECLEETPASQSERTTIQNEGDLAKMPVSRKRRIRNRKHGRFV FT SYLVNEAKAEYGLPKPTEAYRLMVGGFLNRLCKEWGVVTSHTHQAVSIALPLVFVPTKF FT DVMGKAMCATTRTNQLIGENSTDQATGWFDNVLGIGGGVGLRFLGK" FT CDS 43..2232 FT /transl_except=(pos:670..672,aa:OTHER) FT /product="replicase" FT /note="readthrough protein" FT /note="ORF2" FT /db_xref="GOA:O12301" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:O12301" FT /protein_id="CAA73863.1" FT /translation="MGAISKISKISSFVVAGIVAYKVGKATYNAFRYRNQESITAARDL FT QAAVEAVEEQPEFGSVEECLEETPASQSERTTIQNEGDLAKMPVSRKRRIRNRKHGRFV FT SYLVNEAKAEYGLPKPTEAYRLMVGGFLNRLCKEWGVVTSHTHQAVSIALPLVFVPTKF FT DVMGKAMCATTRTNQLIGENSTDQATGWFDNVLGIGGGVGLRFLGKXGCLERRLGFSTT FT VSRGSHPDLVVKPSGRPEKQRQLSAIVDSWGRKPLVFTITRLANLRRGMIERMYYVERD FT KNLVEPPAPSVDFRLPHFSSAFKKVIGRHTPVTRQAFVEFYRGRKRTIYEKAVESLSAA FT PVTHRDARLKTFVKAEKLVLSRKPDPAPRIIQPRAPRYNVELGVYLRPFEHKAFRAVER FT VFGSPTIMKGYTAEEQASIAREKWDRFSKPVAIGLDASRFDQHVSVAALKWEHKLYHHA FT FNHDKTLKKLLKWQIHNEGTAFASDGCIKYKKTGCRMSGDMNTSLGNCLIMCGMVYDLL FT VTHDIDAELLNNGDDCVLICERSEEAHLLEVIPQYFRQYGFTMEVEKPVHIFEKLEFCQ FT TQPVYVDGKWIMVRKPNPAMSKDLTCLLPIQNENNFKEWLSAVSECGLALTGGVPLWQN FT FYQACNLGAARTGFTKSGLFTESGLAYASRGLHRRFSEPSAETRHSFYLAFGITPDLQL FT ALEKELDSKIMNEWTMIPRDTRQRTYYSTISNELT" FT CDS 2219..2428 FT /product="movement protein" FT /note="ORF3" FT /db_xref="UniProtKB/TrEMBL:O12302" FT /protein_id="CAA73864.1" FT /translation="MNSHDDGNNSDPSPGNYSRNRGVRNKGMSGVKEQAVGQEIQKQHQ FT GRGNSTMVNVADTQTITVTNNFNF" FT CDS 2428..2604 FT /product="movement protein" FT /note="ORF4" FT /db_xref="GOA:O12303" FT /db_xref="UniProtKB/TrEMBL:O12303" FT /protein_id="CAA73860.1" FT /translation="MKYCRCSDTAPTDHITLLFVIFILSGLILSLCTNITSNNYENHTT FT ENKTQWITIGGQQ" FT CDS 2546..3568 FT /product="capsid protein" FT /note="ORF5" FT /db_xref="GOA:O12304" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:O12304" FT /protein_id="CAA73861.1" FT /translation="MKTTQPKTKPSGSPLADNNKSYRSNRTNKQKTQDQSAPVAISRQV FT RGSVPKLAGNRPFTFGHRELIATISNTVLFQVNGGVGGNLYRLNPANSSLFTWLPSISA FT NFDQYRFLKVWLEYAPFCSTTEAGRVGLYFDKDSQDPEPTDRVELANFGHLSETVAWSP FT IELHLPTDNVVRYMSDSSVSDPKLIDLGQIGFATYGGGSTNAIGDLFIHYTIELQQPQP FT TYFAVQTLQSGNGSSSAGPTVAAVTASTGTSTTLTFRSPGTYLVNLFQRSLTFTSIVAT FT GGTVINSQATLQSGATAYCSQHNVTVSTPGGALVATGTGFGNYNFQVTRARVQNRCDLL FT " XX SQ Sequence 3803 BP; 1061 A; 876 C; 954 G; 912 T; 0 other; ggtaaagacg ccaatctttg ctagtcaacc aaagactata acatgggggc tatatcgaag 60 atttctaaga ttagttcgtt cgtagtggca ggcattgttg catataaggt tggtaaagct 120 acatacaatg cttttaggta caggaaccag gaatctatta cagcagcccg ggacctccaa 180 gcagcagtgg aagctgtgga agaacaaccg gaattcggta gtgtagaaga atgtcttgag 240 gaaactccag cttctcaatc tgaaagaacc accattcaga atgaggggga cctagccaaa 300 atgcctgtca gtcgtaaacg tcgtattcga aacaggaaac acggtcggtt tgttagctat 360 ctagttaacg aggctaaggc agagtacgga ctacccaaac caactgaagc atataggcta 420 atggttggtg gatttctcaa tcgattatgt aaagaatggg gagtggtgac tagccacaca 480 catcaagcgg tttctattgc cctgccactt gtcttcgttc cgacgaagtt cgacgtgatg 540 gggaaagcta tgtgtgccac tacccggacg aaccaactca taggggagaa ttccactgat 600 caagctacag ggtggtttga caatgttctg ggaattggag gcggcgttgg cctccggttc 660 ctgggcaaat aggggtgcct tgaaaggagg ctagggttct ctaccacagt ttctcgtggt 720 agtcaccccg atctggtggt caaaccatca gggcgcccgg agaaacagcg gcagttatcc 780 gctatagtgg actcatgggg tcgcaaacca ttggtgttca caataactcg tctcgccaac 840 ttgcggaggg gcatgattga gcgaatgtat tatgtagagc gagacaaaaa tctcgtggaa 900 cccccagcac ctagtgtgga tttccgtctt ccacacttct cgtctgcgtt caagaaggta 960 attggtcgtc ataccccggt aactcgacaa gcttttgttg aattttatag gggcaggaag 1020 agaaccattt acgagaaagc ggtggagagc ttgtccgcag ctccagtaac ccaccgagat 1080 gcgagactaa agacgtttgt caaggcagag aagctggtat tgtcgcgcaa gcccgatcca 1140 gctcctcgga taatccaacc gagggcgcca cgatataacg ttgagttagg ggtgtatttg 1200 agaccgttcg aacataaagc gtttagagca gtagaacgcg tattcgggag tccaactatc 1260 atgaaaggct acacagcaga ggaacaagca tctatagcga gagaaaagtg ggatcgcttc 1320 tccaaaccgg tggcgattgg tttggatgct agtaggttcg accagcatgt ttctgttgcg 1380 gctttaaaat gggagcacaa attgtaccat catgctttca atcatgataa aactctaaag 1440 aagttattaa aatggcaaat tcacaatgag ggaaccgctt tcgctagcga tgggtgtatc 1500 aagtataaga agactgggtg tcgaatgagt ggtgacatga atacaagtct cgggaactgt 1560 ttgattatgt gcggtatggt ttacgacctc ttggtaacac acgatataga cgcagaattg 1620 cttaacaacg gtgatgactg tgtactcata tgcgagaggt cggaggaagc gcatttacta 1680 gaagtcattc cccagtattt ccgtcaatac ggttttacaa tggaggtgga aaaacccgtg 1740 cacattttcg agaagctcga gttttgtcaa actcagccag tctatgtcga tggaaagtgg 1800 attatggtga ggaaacccaa ccctgctatg agtaaggacc tcacgtgttt attgccaatt 1860 caaaatgaaa acaacttcaa ggagtggcta agtgcagtta gcgagtgtgg gttagcttta 1920 acgggtggag tcccgttgtg gcaaaacttc taccaagcct gcaacttagg agcggcccgc 1980 accggcttca cgaaatctgg tctcttcaca gagtccggtt tagcctacgc atcccgtggt 2040 ttacacagga ggtttagtga acctagtgcg gaaactcgcc attcattcta tcttgctttt 2100 ggcatcacgc ctgacctcca attggcgttg gagaaagaac tcgacagcaa gatcatgaac 2160 gagtggacca tgattccccg tgatacgcgc caacgtacct actactctac aatcagcaat 2220 gaactcacat gatgacggaa acaatagtga tccatctccg ggaaattaca gtcgaaatcg 2280 gggcgtacga aataagggta tgtcaggagt caaagagcaa gccgttggac aagagatcca 2340 gaaacagcac cagggacgag gtaatagcac aatggtcaat gttgcagata cccaaaccat 2400 aacggtgaca aacaacttca atttctgatg aagtactgtc ggtgcagtga tacggcgcca 2460 accgatcata tcactcttct ctttgtaatc ttcatactgt caggacttat tttatctctg 2520 tgtaccaata taacatcaaa caattatgaa aaccacacaa ccgaaaacaa aacccagtgg 2580 atcaccattg gcggacaaca ataaaagcta tcgttccaat cgaaccaaca agcagaagac 2640 acaggaccag tcagcacctg ttgccatctc acgccaagtg agggggagcg ttcctaaact 2700 cgccggcaac agaccgttca catttggcca tcgagaacta atcgccacca tatccaatac 2760 tgtactcttc caagtgaatg gcggagtggg gggtaatctc taccgactta accccgctaa 2820 ttcctcccta ttcacctggt tgcctagcat atcggcgaac ttcgaccagt acagattctt 2880 aaaggtctgg cttgaatatg ccccattttg ctcaaccact gaggctggca gggtggggtt 2940 gtacttcgac aaagactcac aagatcctga gcctactgat cgcgtggaat tagcgaactt 3000 tggtcatctt agtgagaccg tggcatggtc tcccatcgag ttacatctac cgaccgacaa 3060 tgtggtgcgg tatatgagcg attcttccgt ttcagatcct aagttgatag atctggggca 3120 gatcgggttc gccacttatg gtggcggatc taccaatgca attggggact tgttcataca 3180 ttacaccata gaactgcagc aacctcagcc aacctacttt gcagtccaga ctctccaatc 3240 tggaaatggc tctagtagtg ccggccccac tgtagccgct gtaacggcta gcactggcac 3300 cagtactact cttacctttc gaagcccggg aacgtatctc gtcaatcttt tccagcggtc 3360 gcttactttc acgagtatag tggcaactgg agggaccgtt ataaattccc aggctaccct 3420 gcaatcaggc gcgacggcat actgcagcca acataatgta actgtatcaa ctccaggtgg 3480 ggcactagtg gcaacgggga cgggatttgg aaactataat ttccaggtca ctcgtgctag 3540 ggtacaaaac aggtgtgatc ttctctagag gaagatgctt gggggtgttc ccctaaagtt 3600 cagaatggtc tatcagggag caggcacttt tccggctttg gcgagtcgtc tccacttgta 3660 tacgaacagt gaggggaaaa gttatctgat agaagaatga accatggaca aggacactct 3720 aaaccaccac taagaagcta tagggaaacc ttgctgaggg cagtgagtgg tcgtaccaga 3780 acgaatatgg ctttgccccg ccc 3803 //