ID   Y11747; SV 1; linear; genomic RNA; STD; VRL; 1011 BP.
XX
AC   Y11747;
XX
DT   07-SEP-1997 (Rel. 52, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 3)
XX
DE   Shallot yellow stripe virus RNA encoding polyprotein precursor
XX
KW   coat protein; nuclear inclusion B; polyprotein.
XX
OS   Shallot yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RA   van der Vlugt R.A.A.;
RT   ;
RL   Unpublished.
XX
RN   [2]
RP   1-1011
RA   van der Vlugt R.A.A.;
RT   ;
RL   Submitted (10-MAR-1997) to the INSDC.
RL   R.A.A. Van Der Vlugt, DLO-Research Inst. for Plant Protection, Virology,
RL   P.O. Box 9060, 6700 GW Wageningen, NETHERLANDS
XX
DR   MD5; 4eed5d463183e1b1429e3b0e428ed56d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1011
FT                   /organism="Shallot yellow stripe virus"
FT                   /host="Allium cepa L. var. ascalonicum (shallot)"
FT                   /lab_host="Allium cepa L. var. cepa (onion)"
FT                   /strain="Ac127I"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:62059"
FT   CDS             <1..804
FT                   /codon_start=1
FT                   /product="polyprotein precursor"
FT                   /db_xref="GOA:O41330"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:O41330"
FT                   /protein_id="CAA72418.1"
FT                   /translation="PTPSYVSYQATESEDAANVNTDKQVGKNKDKDRDVDVGTSGEFSV
FT                   PKVKMLSDKMRLPRIGKKVVLNGKHLLSYKPDQIDLYNTRATHAQFKTWYEAVKLEYEL
FT                   TDEQMKIVMNGLMVWCIENGTSQNLTGVWTMMDGDNQMEYPLSPIIDNAKPTFRQIMAH
FT                   FSDAAEAYIEYRNATEKYMPRYGLQRNLREYSLARYAFDFYEMNSKTPIRAKEAHMQMK
FT                   AAAVRGAANRMFGLDGNIGTDDENTERHTAADVNKDHHTLLGLRM"
FT   mat_peptide     <1..27
FT                   /codon_start=1
FT                   /product="nuclear inclusion B"
FT   mat_peptide     28..801
FT                   /product="coat protein"
XX
SQ   Sequence 1011 BP; 340 A; 183 C; 241 G; 247 T; 0 other;
     ccaacaccga gttatgtgtc atatcaagcg acagaatcag aagacgctgc gaatgtgaac        60
     actgacaagc aagtcggaaa gaacaaggat aaggacagag atgttgatgt tggcacatca       120
     ggtgagtttt cagttccgaa ggtgaaaatg ttatcagata aaatgcgttt gccacgaatt       180
     ggaaagaaag tggtactcaa cggcaaacat cttttatctt ataaacctga ccaaattgat       240
     ttgtataaca cacgagccac acacgcacag tttaagacgt ggtacgaggc ggtgaaacta       300
     gaatatgaat tgacggatga acaaatgaaa atagtcatga atggtttgat ggtatggtgc       360
     attgagaacg gcacatcaca aaatttgacg ggggtttgga cgatgatgga tggcgacaac       420
     caaatggagt acccactcag tcctattatt gacaatgcta agcctacatt cagacaaata       480
     atggcacatt tcagtgacgc agctgaagcg tacattgaat ataggaatgc cacagaaaaa       540
     tacatgcctc ggtatggact tcagcgaaac ttaagagaat acagcctagc acgttacgca       600
     ttcgactttt atgagatgaa ttcaaagacg ccgatccgcg cgaaggaagc tcacatgcag       660
     atgaaagcgg cagcggttag aggggcagct aaccgtatgt ttggcttgga tggtaacata       720
     ggcaccgatg atgagaacac agaacgacat acagcagctg atgtgaataa ggatcatcac       780
     acgctgctcg gtcttcgtat gtaacaaaca tatatatatt taatatatag tgtcgtgcat       840
     tatctttcgt tatatttgaa tatgagcaaa catagtgtgg ttacaccacc gtttgtggca       900
     tagtatatga tataacatcg ctagcactat ttgcaccatg atactcagtg tggtggtacc       960
     acgatgaaag agttgagtgt tgcacgtttt gttagggaga caaaaaaaaa a               1011
//