ID Y10884; SV 1; linear; genomic RNA; STD; VRL; 3315 BP. XX AC Y10884; XX DT 07-JAN-1999 (Rel. 58, Created) DT 07-JAN-1999 (Rel. 58, Last updated, Version 1) XX DE Cucumber mosaic virus gene encoding protein 1a XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RA Barbarossa L.; RT ; RL Unpublished. XX RN [2] RP 1-3315 RA Barbarossa L.; RT ; RL Submitted (29-JAN-1997) to the INSDC. RL L. Barbarossa, Centro di Studio sui Virus e le Virossi, delle Colture RL Mediterranee and Dip. di, Protezioine delle Piante dalle Malattie, Univ. RL Bari, Via Amendola n.165/A Bari, ITALY XX DR MD5; 07e39b9e20f70571883b0c25914f54b4. DR EuropePMC; PMC136033; 11884564. XX FH Key Location/Qualifiers FH FT source 1..3315 FT /organism="Cucumber mosaic virus" FT /host="squash" FT /lab_host="tomato" FT /strain="S" FT /mol_type="genomic RNA" FT /db_xref="taxon:12305" FT CDS 31..3006 FT /product="1a protein" FT /db_xref="GOA:Q9YJS1" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9YJS1" FT /protein_id="CAA71832.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGL FT KVYIRNVLDVKDSEVIRTRYGGKYDLHLTQQELAPHGLAGALRLCETLDCLDFFPRSGL FT RQDLVLDFGGSWVTHNFADTTYCCSPCLGIRDKMRHAERLMSMRKVILNDPQQFDGRQP FT DFCTKSAAECKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQG FT FIPELKCQWRKIKSAFSEEEVATCLAAKINSSVFSRVRNGKTLIAFDFVEESTMSYVHD FT WENIKSFMTDQTYSFNGMTYGIERCVIYAGVMTYKIVGVPGMCPPELIRHCIWFPSMKD FT YVGLKIPASDDLVKWKTVRILLSTLRETEEIAMRCYNDKKNWMDQFKIILGVLSSKSST FT IVINGMSMQSGERIDVNDYHYIGFAILLHTKLKYEQLGKMYDMWNASFIWKWFASMSRP FT FRVFFSTVVKTLFPTLRPREEKEFLVKLSTFVTFNEECSFDGGEEWDVISSAAFVAAQA FT VADGTILAEEKAKKLADRLAVPVEEVSAIPEVSPTPVDQGTACGLETETSELDSLSAQT FT RSPITRIAERATAMLEYSAYEKQLHDTTVSNLQRIWCMAGGDNKRNSLESNLKFVFDTY FT FSVDALVNVHFPTGRWMHPVPEGVVYSVGYNEKGLGPKLDSELYIVNGDCVISNSHDLF FT SITKSLLAPTGTISQVDGVAGCGKTTAIKSMFNPSTDIIVTANKKSAQDVRYALFKSTD FT SKEACAFVRTADSILLNDCPTVSRVLVDEVVLLHFGQLCAVMSKLHAVRALCFGDSEQI FT AFSSRDASFDMRFSKLIPDETSDADTTFRCPQDVVPLVRLMATKALPKGTRTKYSRWVS FT QSKVRKSVTSRAVASVSLVELDPTRFYITMTQADKASLITRAKELNLPKAFYTDRIKTV FT HESQGISEDHVTLVRLKSTKCDLFKKFSYCLVAVTRHKVTFRYEYCGVLGGDLIAACIP FT LV" XX SQ Sequence 3315 BP; 834 A; 723 C; 773 G; 985 T; 0 other; cttctcgtct tttcttagtt taaaattcct atggcaacgt cctcgttcaa catcaatgaa 60 ctggtagcct cccacggcga taaaggacta cttgcgacag ccctcgttga taagacagct 120 catgaacagc tggaggagca acttcaacat caacgtagag gccttaaggt ctacatccgt 180 aatgttttgg atgtaaagga ctccgaagtc attcggactc ggtatggtgg taagtacgac 240 ctccatctca cccagcagga attagctccc catggcctcg ctggtgccct ccgcttgtgt 300 gaaactctcg attgtctaga ctttttccct cgttcaggtc tgcggcagga cctcgtctta 360 gacttcggag gaagttgggt cacacacaac ttcgcggaca caacgtactg ctgctcccca 420 tgtttgggta ttcgtgacaa gatgcgtcac gctgaaagat tgatgagcat gcgcaaggtc 480 attttaaacg atccacaaca gtttgatggc cgccagccgg acttttgcac taagtctgca 540 gctgaatgca aagttcaagc ccactttgct atttctatac acggaggata tgatatgggc 600 tttagaggtt tatgtgaggc aatgaacgct cacggaacta cgattttgaa agggacgatg 660 atgttcgacg gtgctatgat gtttgacgac caaggcttta ttcctgaact taaatgtcag 720 tggcgaaaaa ttaaatccgc cttttctgag gaggaggtag ccacttgttt agcagccaaa 780 atcaattcta gtgttttttc acgcgtgcga aatgggaaaa ccttaatcgc atttgacttc 840 gttgaggaat ccacgatgtc ttatgttcac gattgggaga atataaaatc gtttatgaca 900 gatcaaacgt actctttcaa tggtatgacc tatggaattg agcgttgtgt tatttacgct 960 ggcgtgatga cttacaagat tgttggcgtg cctggtatgt gcccacccga actcattcga 1020 cattgtatct ggttcccctc tatgaaggac tatgttggtc ttaagattcc cgcgtctgat 1080 gacttggtta aatggaaaac agtccgtatt ttactgtcaa cattacgtga gactgaagaa 1140 atagctatgc gttgttataa cgacaagaag aattggatgg atcaattcaa gattattctc 1200 ggtgttttat catcgaagtc ctccacgatc gttatcaatg gtatgtctat gcaatccggt 1260 gaacgtattg atgtcaatga ttatcattac atcggttttg ctatccttct tcacacgaaa 1320 ttgaaatacg aacaacttgg gaaaatgtac gatatgtgga atgcttcctt catttggaag 1380 tggtttgcgt ctatgtctag accattccgt gttttctttt ccactgttgt taagactttg 1440 tttccgactt tgagaccgcg cgaggaaaag gagtttttgg tcaaactttc cactttcgtc 1500 acctttaacg aggagtgctc ttttgacgga ggggaagaat gggacgtgat atcatcagcg 1560 gctttcgtag ccgctcaggc tgttgcagat ggtactattc tggccgagga gaaagctaag 1620 aaattagctg atcgtctggc cgtgcctgtt gaagaagtat ctgctattcc tgaggtgtct 1680 cctacacctg ttgatcaggg cactgcttgt ggactggaaa cagaaacatc ggaactggat 1740 tctctgtctg cccaaacacg ttcccccatc acacggatcg ctgaaagagc gaccgctatg 1800 cttgaatatt cagcttatga gaaacaattg cacgatacca ccgtttcaaa tcttcaacga 1860 atttggtgca tggcaggtgg cgacaacaag agaaactctt tagagagtaa tttgaaattt 1920 gtgtttgaca cttatttttc tgttgacgcc ctggtgaatg ttcactttcc tactgggagg 1980 tggatgcacc ctgtgcctga gggcgtggta tactctgttg gttataacga gaagggtctt 2040 ggtcctaaac ttgatagtga gttgtacata gttaatggtg attgtgtgat ttcgaacagt 2100 catgatttgt tttcaatcac taaatctttg ttagctccca ccggaaccat cagccaagtc 2160 gatggtgtag ctgggtgcgg aaaaaccact gctataaaat ccatgtttaa tccttccaca 2220 gatataattg tcacagccaa caagaaatct gctcaagatg tgcgttatgc gctgtttaaa 2280 tctactgact ccaaagaagc ttgtgctttt gttaggaccg ctgattccat attactcaat 2340 gattgcccta cggtgtctcg agtgcttgtg gatgaagttg ttttgttgca ctttggtcag 2400 ttgtgcgctg tcatgtcgaa acttcatgct gtcagagctt tgtgtttcgg agactccgaa 2460 cagatagcct tctcctctcg tgacgcttcg ttcgacatgc gtttctctaa gcttattccg 2520 gatgagacca gtgatgcgga cacaactttc cgatgcccac aagatgtagt accgcttgtg 2580 cgtttgatgg ctacgaaggc tctaccgaaa gggacccgta cgaaatactc aagatgggtg 2640 tcccaatcta aagtgaggaa gtctgttact tcgcgtgctg ttgctagtgt atctctagtt 2700 gaactggacc ccaccagatt ctatattacg atgacgcaag ctgataaagc ctcactaatc 2760 actagagcta aggaactgaa cctacccaag gcattctaca ctgataggat aaagactgtc 2820 catgaatctc aaggtatttc agaagatcat gtgaccctgg ttaggttgaa gagtactaaa 2880 tgtgacctgt tcaagaaatt ttcctactgc ttagttgcag ttactcgaca caaggtcacc 2940 ttccgctatg agtactgtgg tgtgttaggt ggggacctaa tcgctgcttg tattccgtta 3000 gtctgaacgc ggaaggtccg aagacgttaa actacactct ctttattgcg agtgctgagt 3060 tggtagtttt gctctaaact atctgaggtc gctaaatcca gtattggttg cgaacgggtt 3120 gtccatccag cttacggcta aaatggtcag tcatgctcca aaggcatgcc gacatcttac 3180 aaggttgtcg aggtaccctt gaaaccatct ccatggtttc ttcgttgtcc atccagctta 3240 cggctaaaat ggtcagtcgt gtctttcaca cgccgatgtc ttacaatatg tcgaggtacc 3300 cttgaaacca tctcc 3315 //