ID Y00514; SV 1; circular; genomic DNA; STD; VRL; 2690 BP. XX AC Y00514; XX DT 06-JUL-1989 (Rel. 20, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Maize streak virus - A[South Africa] infectious genome, strain South DE African XX KW capsid protein; circular; genome; unidentified reading frame. XX OS Maize streak virus - A[South Africa] OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2690 RX DOI; 10.1093/nar/16.1.229. RX PUBMED; 2829117. RA Lazarowitz S.G.; RT "Infectivity and complete nucleotide sequence of the genome of a South RT African isolate of maize streak virus"; RL Nucleic Acids Res. 16(1):229-249(1988). XX DR MD5; face45bd2515d390d60f40097a3bdadd. DR EPD; EP26005; MSV_105_1. DR EPD; EP26006; MSV_09_2. DR EuropePMC; PMC2777162; 19903330. XX CC Data kindly reviewed (04-Jul-1989) by Lazarowitz S.G. CC CC ORFs for 10.9 kd and 26.8 kd proteins correspond to those reported CC for MSV-N and MSV-K both by sequence and position homology; CC overlapping arrangement of ORFs for 31.3 kd and 17.2 kd proteins CC is identical to that reported for MSV-N; ORF for put. 9.7 kd CC protein remains unsure. XX FH Key Location/Qualifiers FH FT source 1..2690 FT /organism="Maize streak virus - A[South Africa]" FT /strain="South African" FT /mol_type="genomic DNA" FT /clone_lib="pEMBL." FT /db_xref="taxon:268328" FT precursor_RNA <1..1115 FT /note="longer '+'-strand transcript (circular genome !)" FT CDS join(2689..2690,1..304) FT /product="10.9 kD protein" FT /db_xref="GOA:P14992" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/Swiss-Prot:P14992" FT /protein_id="CAA68570.1" FT /translation="MDPQNALYYQPRVPTAAPTSGGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNLPAPPSQGNPGPFVPGTG" FT CDS complement(248..505) FT /product="9.7 kD protein" FT /note="putative" FT /protein_id="CAA68567.1" FT /translation="MRSHTPPDGTVIMVVPACWSVWIWRDGLSALLPALFSPAEEGFFL FT GTRLLQFASSPRFLLDVDMADCLSRAWNKWPGIALTWWCW" FT CDS 315..1049 FT /product="26.8 kD virion capsid protein" FT /db_xref="GOA:P14986" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/Swiss-Prot:P14986" FT /protein_id="CAA68566.1" FT /translation="MSTSKRKRGDDANWSKRVPKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNTSWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1218..1664) FT /product="17.2 kD protein" FT /db_xref="GOA:P14989" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:P14989" FT /protein_id="CAA68568.1" FT /translation="MDGFCIQSSDERSRKQSLYIVGPTRTGKSTWARSLGVHNYWQNNV FT DWSSYNEDAIYNIVDDIPFKFCPCWKQLVGCQRDFIVNPKYGKKKKVQKKSKPTIILAN FT SDEDWMKEMTPGQLEYFEANCIIYIMSPGEKWYSPPVLPPTEEV" FT CDS complement(1559..2377) FT /product="31.3 kD protein" FT /db_xref="GOA:P14989" FT /db_xref="GOA:P14990" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:P14989" FT /db_xref="UniProtKB/Swiss-Prot:P14990" FT /protein_id="CAA68569.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAVFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHATSKAEYLSMIQKELPF FT DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSVSSHQMKDQESRASTSSAQQEPENLLGPEA" FT precursor_RNA 2685..>2690 FT /note="longer '+'-strand transcript (circular genome !)" XX SQ Sequence 2690 BP; 693 A; 636 C; 688 G; 673 T; 0 other; ggatccacag aacgccctgt attatcagcc gcgggtaccc actgcagctc cgacatccgg 60 aggagtgccg tggagtcgcg taggcgaggt agctattttg agctttgttg cattgatttg 120 cttttacctg ctttaccttt gggtgctgag agaccttatc ttagttctga aggctcgaca 180 aggcagatcc acggaggagc tgatatttgg tggacaagct gtggatagga gcaaccctat 240 ccctaatcta ccagcaccac caagtcaggg caatcccggg ccatttgttc caggcacggg 300 ataagcaatc agccatgtcc acgtccaaga ggaagcgggg agatgatgcg aattggagta 360 agcgggtgcc taagaagaag ccttcttcag ctgggctgaa gagggctgga agcaaggccg 420 ataggccatc cctccaaatc cagacactcc agcatgctgg gaccaccatg ataactgtcc 480 catccggagg agtatgtgac ctcatcaaca cctatgcccg aggatctgac gagggcaacc 540 gccacaccag cgagactctg acgtacaaga tcgccgtcga ctaccacttc gttgccgacg 600 cggctgcctg ccgctactcc aacaccggaa ccggtgtaat gtggctggtg tatgacacca 660 ctcccggcgg acaagctccg accccgcaaa ctatatttgc ctaccctgac acgctaaaag 720 cgtggccggc cacatggaaa gtgagccggg agctgtgtca tcgcttcgtg gtgaaacggc 780 gatggttgtt caacatggag accgacggtc ggattggttc ggatatccct ccctcgaata 840 caagttggaa gccttgcaag cgcaacatct acttccacaa gttcacgagt gggttgggag 900 tgagaacgca gtggaagaat gtaacggacg gaggagttgg tgccatccag agaggagctt 960 tgtacatggt cattgccccc ggcaatggcc ttacatttac tgcccatggg cagacccgcc 1020 tgtactttaa gagtgttggc aaccagtaat gaataaaaac gcccgtttta ttatatctga 1080 tgaatgctga aagcttacat taatatgtcg tgcgatggca cgaaaaaaca cacgcaatca 1140 atacaggggg gtagtcggcg ggcggctaag ggtggtgctc ggcgggcaaa acatcgaaaa 1200 atcaagatct atatgaatta cacttcctcc gtaggaggaa gcacaggggg agaataccac 1260 ttctcccccg gcgacataat gtaaatgatg cagtttgcct cgaaatactc cagctgccct 1320 ggagtcattt ccttcatcca atcttcatcc gagttggcga ggattattgt aggcttagac 1380 ttcttctgca cctttttctt cttaccatac ttggggttta caatgaaatc cctctgacag 1440 ccaactaact gtttccaaca aggacagaat ttaaacggaa tatcatctac gatgttgtag 1500 attgcgtctt cgttgtatga agaccaatca acattatttt gccagtaatt atgaacccct 1560 aggcttctgg cccaagtaga ttttccggtt cttgttgggc cgacgatgta gaggctctgc 1620 tttcttgatc tttcatctga tgactggata cagaatccat ccattggagg tcagagattg 1680 catcctcgag ggtataacag gtaggttgaa ggagcatgta agcttcggga ctaacctgga 1740 agatgttagg ctggagccaa tcattgattg actcattaca aagtaaatca ggtgaggagg 1800 gtggatgagg attggtgaac tcttcctgaa tctcaggaaa aagcttattt gcagagtatt 1860 caaaatactg caattttgtg gaccaatcaa agggaagctc tttctggatc atggagaggt 1920 actctgcttt ggaagtagcg tgtgaaataa tgtctcgcat tatttcatct ttagaaggct 1980 ttttttcctt tacctctgaa tcagattttc ctaggaaggg ggacttccta ggaatgaaag 2040 tacctctctc aaacacagcc agaggttcct tgagaatgta atccctcact ctgttaactg 2100 acttggcact ctgaatattt gggtgaaacc catttatatc aaagaacctt gagtcagata 2160 tccttaccgg cttctctgtc tgaagcaatg catgtaaatg caaacttcca tctttatgtg 2220 cctctcgggc acatagaata tacttgggaa tccaacgaac gacgagctcc cagatcatct 2280 gacaggcgat ttcaggattt tctggacact ttggataggt taggaacgtg ttagcgttcc 2340 tgtgtgagaa ctgacggttg gatgaggagg aggccatagc agacgacgga ggctgaggct 2400 gagggatggc agactgggag ctccaaactc tatagtatac ccgtgcgcct tcgaaatccg 2460 ccgctccctt gtcttatagt ggttgtaaat gggccggacc ggtccggccc agcaggaaaa 2520 gaaggcgcgc actaatatta ccgcgccttc ttttcctgcg agggcccggt agggaccgag 2580 cgctttgatt taaagcctgg ttctgctttg tatgatttat ctaaagcagc ccaatctaaa 2640 gaaaccggtc ccgggcacta taaattgcct aacaagtgcg attcattcat 2690 //