ID X97304; SV 1; linear; genomic DNA; STD; VRL; 7876 BP. XX AC X97304; XX DT 01-JUN-1996 (Rel. 47, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Strawberry vein banding virus complete genome XX KW complete genome; ORFI; ORFII; ORFIII; orfIV; ORFV; ORFVI. XX OS Strawberry vein banding virus OC Viruses; Ortervirales; Caulimoviridae; Caulimovirus. XX RN [1] RX DOI; 10.1023/A:1008039024963. RX PUBMED; 9654684. RA Petrzik K., Benes V., Mraz I., Honetslegrova-Franova J., Ansorge W., RA Spak J.; RT "Strawberry vein banding virus--definitive member of the genus RT Caulimovirus"; RL Virus Genes 16(3):303-305(1998). XX RN [2] RP 1-7876 RA Petrzik K.; RT ; RL Submitted (03-APR-1996) to the INSDC. RL K. Petrzik, Institute of Plant Molecular Biology, Dept. Plant Virology, RL Branisovska 31, Ceske Budejovice, CZ-370 05, Czech Republic XX DR MD5; 352e1c64b1b700fbc74690b59520657c. DR EuropePMC; PMC5052798; 27716385. DR EuropePMC; PMC5747845; 29291233. XX FH Key Location/Qualifiers FH FT source 1..7876 FT /organism="Strawberry vein banding virus" FT /host="Fragaria sp." FT /mol_type="genomic DNA" FT /clone="pSVBV-E3" FT /db_xref="taxon:47903" FT CDS 67..1053 FT /gene="ORF I" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q88438" FT /protein_id="CAA65972.1" FT /translation="MSEEEIRMDQPQGGHDEYIFEEEGTYAHDVAIDSTLLKEIEKKDL FT ELTSEEVFKTPSLWKKFLKARKNICISCVSSREYPIEIAQANGLTEIPFFNREEIESKK FT RVLKPEDRKKIDFIHIGSVKIMIKSTFRTGIDSPISVALLDRRMKNAKDAVFGGVKGNL FT SYGKLIFTYNPKISVSLRDPTINKTLTLAHFFEKEELMHEGNHPYTISYKIGYTLSNSH FT HSLEFRPKEPICIDDLFSTVGKISQAPLQEITPIENYWRMSLGNTSRRLLGERPRMIVI FT EDDEEETPLDRHTERALARSQSRMLGLRPLEDLRTTSRKINTLAHQL" FT CDS 1058..1543 FT /gene="ORF II" FT /db_xref="GOA:Q88439" FT /db_xref="InterPro:IPR004917" FT /db_xref="UniProtKB/TrEMBL:Q88439" FT /protein_id="CAA65973.1" FT /translation="MSFRREPHIYYKKQYLTLNTQNVERGEPEYLYVGGRGIEGCLKHL FT NNINVVCGNIHMMNYYICKTLGIKTSIYRNTPEDNSNPGLLSLLGKPQESSFQNPLEKK FT IDNLSDKIRDLGSNTTGIETEKKLADLSNKISELERKISSLNTDDIMNLLKKLDDKC" FT CDS 1543..1896 FT /gene="ORF III" FT /db_xref="UniProtKB/TrEMBL:Q88440" FT /protein_id="CAA65974.1" FT /translation="MGSVTQKTERIYDEMLKMEERFSRLEQEQQDHFSEKIDQASAILL FT AEIRKIQSKLETCDCNKEILDALKAQDRTKNKGSGPSNLDALDLAHKDNSPKRNPIRGT FT ENWHPQDLKLTKW" FT CDS 1890..3314 FT /gene="ORF IV" FT /db_xref="GOA:Q88441" FT /db_xref="InterPro:IPR001878" FT /db_xref="InterPro:IPR001988" FT /db_xref="InterPro:IPR036875" FT /db_xref="UniProtKB/TrEMBL:Q88441" FT /protein_id="CAA65969.1" FT /translation="MVSRRERLEQLFDEDHPEMDIIIQYLSLLDHELDDCQEEKLQVLV FT AKEMIDYSSSEDDEPTRNVKVNIKEEDEETYRPNRKRRGNSSSQPNYTRYDIPQEYIPN FT RKTGLTNTKSLDLDCASNRRQLIEEWDNEMRLIIKTEKALTNDFDLILTLAKSKTVGNA FT KQLLESLHTEAFKQASTTGEEFLTTLTNSFYTIFVGTNYLTQGTREKEKAVQEARNRLV FT KLQICNLCSLESFFCDYETNLLKLPIEEWPKYIEEYIRKIPFVGMEVLEEYSKQDSITK FT GSLGYAHNLIKAYMEKKCKSLKIKKEIRRNMCCPKFSSPETQYGCKPISHKKAKKQKYK FT QYYKKKYRLRKPKRWTNSRRKYSGRKLFRRKRDQKEETSQQSPEEKKKFCPQGKTTCRC FT WICNEIGHFAKDCRNKSANHNKIIEELQSLQLEPVFDLNELKIEEKFWELKEVSESSES FT ESEISSDESSDSEDLE" FT CDS 3406..5532 FT /gene="ORF V" FT /db_xref="GOA:Q88442" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR000588" FT /db_xref="InterPro:IPR041373" FT /db_xref="UniProtKB/TrEMBL:Q88442" FT /protein_id="CAA65970.1" FT /translation="MENNLQLLEELNHLEEGWEMLTDEDFKLQQNEDEEQLLESVDSEE FT RFSTLTKTNPNSIYIRGNFYFKGYKKYSLDLYVDTGASMCTANKHVIPEEFWVNAKNPI FT RARIANDSIMTFNKVAELMQVQIADETFIIPTLYQATTKGDITLGNNFCRLYEPFVQYK FT DMITFHKDGRAVSTKKVTKAYFHGLPGFLESKKVGSSTSTPNPENITPVTINQDNISKI FT FKGEEIGESEQLFSTISAYTEVEKLLDSICSEHPLDSRINKGKFEAQIALLDTNKIIKC FT KPMQYSPQDREEFKTQIEELLKLGIIRPSKSPHSSPAFMVRNHAEIKRGKARMVINYKK FT LNDHTKGDGYLLPNKEQLLQRIGGKTFYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHY FT EWLVMPFGLKQAPAIFQRHMDESLSNMYPQFCAVYVDDIIVFSKTEEEHLGHVKIVLNR FT CKALGIVLSKKKAQLCKTTINFLGLVIERGNLKVQSHIGLHLVAFPDQLSDRNALQRFL FT GLLNYISAYFPKIANLRSPLQVKLKKEITWSWTEKDTETVRKIKSLVKTLPDLYNPSPE FT DKPIIECDASDDHWGAILKAKLPEGKEVICRYASGTFKPAEKNYHSNEKEILSIIKAIK FT AFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQMALREYSFDIEHVSGQKN FT VLADIMTRELAGKT" FT CDS 5544..7088 FT /gene="ORF VI" FT /db_xref="InterPro:IPR011320" FT /db_xref="UniProtKB/TrEMBL:Q88443" FT /protein_id="CAA65971.1" FT /translation="MEQVALSYEESLLHQMNEVKLSIYDLEDQLSAKRYEFDLLERKLR FT RHTSAVKSQQDNITGTLPREAVIIPEPRKLEVTQQLGEGQTQSTELSSRQQPEEGKPNN FT SQSYTGIRPDQLFQSADNQTTKVESAPQVELRPQAPLSGSKTYVIYDGPNQGIYDSWAL FT VAPIKQNYHHQAFSTRKEAELALQTYIVQKHQKKPIEQHQPKEQKAQFPESDYKKALAS FT TKAAPNKNLVVLGRMFKQQPKITEKSKVFERPLVTKDHFIHNYLVAQTHDNCEEHKFFT FT VDSKTLSLYGFIEGADPEYVREAFHCGLISLIYPGENLKEISLLPKDLYRAIKNYRTRV FT CSAQSRPIYLRITSTFLEWENDDILIPYHWIEVGLSNGKIPWDKSYKKTATVEYLPEIT FT ALRPKRIKAVYNQCTKIFADSKKKLNYADDKIILISNYSELIKEKELITLSEYEARFTS FT GQLAITEKTARQWCLDAPEPHLCSRCEAARVVHKTHSEKASSTDTEKDNHSSSSNM" XX SQ Sequence 7876 BP; 2889 A; 1581 C; 1497 G; 1909 T; 0 other; tggtatcaga gcctagtact ctcaccagta cgggatccaa ctcatcatct tcatcaacat 60 ccaagcatgt ctgaagaaga aatcagaatg gaccaaccac agggcggcca cgacgagtac 120 atcttcgaag aagaaggtac gtatgcacat gatgttgcaa tagattctac tcttttaaaa 180 gagatagaaa agaaagatct tgaacttact tctgaggaag tattcaagac tccaagcttg 240 tggaagaaat tcctcaaagc tcggaaaaac atatgcattt cttgtgtcag ttctagggaa 300 tatcccatag aaattgctca agcaaatgga cttactgaga ttcctttctt caacagagaa 360 gaaatcgaaa gtaagaaaag ggtgttaaaa cccgaagatc gtaaaaagat agattttatt 420 catataggat ctgttaaaat tatgatcaaa agcaccttta ggacaggaat agactctcct 480 attagtgtag cactccttga ccggagaatg aaaaacgcta aagacgcagt cttcggcgga 540 gttaaaggta acctttccta cgggaaactt atctttacct acaacccaaa aatctctgtt 600 agtcttagag accctacgat taacaagact ttaacactag ctcatttctt tgaaaaagaa 660 gaattgatgc atgagggaaa tcatccctat actatatcct acaaaatagg atacaccttg 720 tcaaactctc accacagcct agagtttaga ccaaaagaac ctatttgtat agatgacctt 780 ttctctacag taggaaaaat atctcaagca cccttgcaag agataactcc catagaaaac 840 tattggagaa tgagcctagg taacactagc agaagacttc taggagaaag acctagaatg 900 attgtcatag aggacgatga agaagagacc cctcttgaca gacatacaga aagagcatta 960 gctagatctc aatctaggat gctaggttta aggcccttag aagaccttag aaccaccagc 1020 cgcaagatta atacccttgc acatcagcta tagaagaatg agtttcagaa gagaacctca 1080 tatctactat aagaagcagt acctcactct caacactcaa aatgttgaaa gaggagagcc 1140 cgaatacctc tatgtaggag ggcgaggaat tgaaggatgt ttgaaacacc tcaataacat 1200 caatgttgta tgtggaaaca tacatatgat gaactactat atttgtaaga ctttaggaat 1260 aaagacttcc atctatagaa acactccaga agataatagt aacccaggat tactatccct 1320 tctaggaaaa cctcaagaga gttcattcca gaaccctcta gagaaaaaga tagacaatct 1380 tagcgataag attagagatc taggatctaa taccacaggt atagagactg aaaagaagtt 1440 agctgacctt agtaataaga ttagtgaact tgaaagaaaa atatcatctc ttaacacaga 1500 tgatataatg aatttactga agaaattaga tgacaaatgc taatgggttc agtaactcaa 1560 aagaccgaaa ggatctatga tgaaatgctc aaaatggaag agcgtttctc ccgcctagag 1620 caggaacaac aagatcattt ctcagaaaag atcgatcagg catctgctat ccttttagca 1680 gaaataagaa aaatacagtc aaaacttgaa acttgtgact gtaacaaaga aatccttgat 1740 gccttaaaag cacaggatag aactaaaaat aaaggatcag gaccttcaaa tcttgatgct 1800 ttagatttag cacataagga taactctccc aagagaaatc ctatccgagg aacagaaaac 1860 tggcatcctc aagatctcaa gctcaccaaa tggtaagcag aagagaaaga ctcgaacaac 1920 tgttcgacga agatcatcca gaaatggata ttattataca atatctgtct ttacttgatc 1980 atgaacttga tgattgtcag gaagagaagt tacaggtact tgtagcaaaa gagatgattg 2040 actacagcag cagcgaagac gacgagccaa ctcgaaacgt caaagtcaac atcaaggaag 2100 aagacgaaga aacctatcgt ccgaaccgaa agcgaagagg aaacagctcc tctcagccaa 2160 attacaccag gtatgatatt ccacaagaat acattcctaa cagaaaaaca ggtttgacca 2220 acaccaaaag cttggacctc gattgcgcca gcaaccgaag acaactcatt gaagaatggg 2280 acaatgaaat gagattaatc attaaaacag agaaagctct tactaatgat tttgatctaa 2340 tcttaactct tgcaaagagt aagactgttg gtaatgccaa acaattatta gaatctcttc 2400 atactgaagc ttttaaacaa gcctctacaa caggagaaga atttctaaca actctaacaa 2460 attcgtttta tactatattt gttggaacta actacttgac gcagggaact cgagaaaaag 2520 agaaagctgt tcaagaagct agaaacaggt tagtcaaatt acaaatttgc aatctctgtt 2580 cactagaaag ttttttctgt gactatgaaa ccaatcttct taaattacca atagaagaat 2640 ggcccaaata tattgaagaa tatattagga aaataccctt tgttgggatg gaagtactcg 2700 aagagtattc caaacaagac agcataacta aaggatcact tggatatgct cacaatctca 2760 tcaaagccta catggagaaa aagtgtaagt ctttgaagat caaaaaggaa atacgtagaa 2820 atatgtgttg tcctaagttc tcctcaccgg aaacacaata tgggtgcaaa cccattagcc 2880 ataaaaaagc taagaaacag aagtacaaac agtactataa aaagaagtat agacttagaa 2940 aacccaaaag gtggactaac tctagaagaa aatattctgg tagaaaactt tttcgcagga 3000 aaagagacca gaaggaagag acttcacagc agtctcccga agaaaagaag aagttctgcc 3060 cacaaggcaa aacaacatgc aggtgctgga tttgtaatga aatcggacac tttgcaaaag 3120 attgcaggaa caagtctgca aatcacaaca agataattga agaacttcaa agtcttcaat 3180 tagaacctgt ctttgacctc aacgagctca agatagaaga aaaattctgg gaacttaaag 3240 aagtctcaga aagctcagaa tctgaatcag agatcagctc agatgaatcc tcagactcag 3300 aagatctgga gtgaacttct agaaacagaa gaaggatgga atcttctctt acaagaagat 3360 tacagtccag aacttgacgc tgttgcagaa gccaagttac aagagatgga gaacaatctt 3420 cagctgctcg aagagctcaa tcaccttgaa gaaggatggg agatgcttac agacgaagac 3480 ttcaagcttc aacaaaatga agatgaagaa caacttcttg aatccgtcga ttcagaagaa 3540 cggtttagta ctctaaccaa gactaatcca aatagcattt atataagagg aaacttttat 3600 tttaaaggct ataaaaaata ttcacttgat ttgtatgttg acacaggtgc aagcatgtgt 3660 actgcaaaca agcatgtcat tccagaagaa ttctgggtga acgcaaaaaa tcctatcaga 3720 gctcgtatag ctaatgatag tattatgact tttaacaaag tcgctgagtt aatgcaggta 3780 caaattgcag atgaaacatt catcatacca accttgtatc aggcaacaac aaaaggagat 3840 attaccttag gtaataattt ctgtcgttta tatgaacctt tcgttcagta taaagacatg 3900 ataaccttcc acaaagacgg acgtgcagtc agtactaaga aggttacaaa agcatacttt 3960 catggacttc caggattcct tgaaagcaag aaagttggca gctcaacgtc aacaccaaac 4020 cctgaaaata tcaccccggt taccattaac caggataata tttccaaaat ttttaagggg 4080 gaggagattg gggaaagcga acaacttttc tcaactattt cagcatacac tgaagtagaa 4140 aaattactcg attcaatctg ttcagaacat cctctagaca gcagaatcaa caagggtaag 4200 tttgaggccc aaattgcatt attagacact aacaaaatta ttaagtgtaa accaatgcag 4260 tattcacctc aagaccgaga agagtttaaa actcagatcg aagaactact caagcttggt 4320 atcatcagac ctagcaagag tccacattcc tcaccagcct tcatggtaag gaatcatgcc 4380 gagatcaaac gaggcaaagc aagaatggta attaactata aaaagttaaa tgaccataca 4440 aagggagatg gctacctact tcctaacaag gagcaactgc ttcaaagaat cggaggtaag 4500 accttttact cttcctttga ctgtaaatct ggattttggc aggtacgcct tgctccagaa 4560 acaattcagc taaccgcttt cagctgtccc caaggacact acgaatggtt agtcatgcct 4620 tttggattaa aacaagcccc tgctattttc caaaggcaca tggacgaaag tctcagcaac 4680 atgtatccac agttttgtgc tgtatatgtt gatgacatca tcgtcttcag caaaactgaa 4740 gaagaacatt taggacatgt caaaattgtt ctaaacagat gcaaagccct aggaatagtg 4800 cttagcaaaa agaaagccca gttgtgcaaa acaactatca atttccttgg tctagtaata 4860 gaaagaggaa atctcaaagt ccagagtcat atcggactac acttagttgc ttttccagat 4920 caacttagtg ataggaatgc cttacaaaga tttttaggcc tcctaaatta tatctccgct 4980 tattttccaa aaatagcaaa ccttaggtca cctttacagg ttaaacttaa gaaagagata 5040 acttggtctt ggactgagaa agacacggaa actgtcagaa aaataaagag tctagtaaaa 5100 actttaccag acctttacaa tccttcacca gaggataagc ctatcatcga atgcgatgca 5160 tcagatgacc attggggagc aatcctcaaa gcaaaacttc cagaaggtaa agaggtaata 5220 tgcaggtatg cttcaggaac ctttaaacca gctgagaaga attaccatag taatgaaaag 5280 gaaatccttt ccattattaa ggcaatcaaa gcttttagag cttatatcct tccttataaa 5340 tttcttgtaa ggactgataa tactaatgct gcttattttg tgagaacaaa tattgcaggt 5400 gattataagc aaagccggct tgtgagatgg caaatggctt taagagaata ttcttttgat 5460 atagaacatg tttctggtca aaaaaatgtt ctagctgata tcatgactcg ggaacttgca 5520 ggaaaaacat aggagtcaga tccatggagc aagtagcctt gagctatgag gagtctctac 5580 tccatcagat gaatgaggta aaactctcaa tttatgatct tgaagatcaa ctctctgcaa 5640 agagatacga gttcgaccta ctcgagcgca agctacgaag gcatactagt gctgtaaaaa 5700 gccaacaaga taatattact ggaactcttc caagagaagc agttattatc cctgagccca 5760 ggaaactgga ggttactcag caacttggcg aaggtcaaac gcaatcgaca gaactaagtt 5820 ctcgtcaaca acctgaggag ggtaaaccta ataactctca gagttatact ggtattagac 5880 cagatcaact gtttcagtct gcagataatc agactaccaa agtggaatct gctccacaag 5940 tagagcttag accccaagct ccattatcag gatcgaaaac gtatgttata tacgatggtc 6000 caaatcaagg aatatatgat agttgggctc ttgtagcacc gataaaacaa aactatcatc 6060 accaggcctt ttccaccaga aaagaagccg aactggccct tcaaacatac attgttcaga 6120 agcaccagaa aaagcctatt gagcaacacc agcccaaaga gcaaaaagcc caattcccag 6180 aatcggacta caaaaaggcc cttgcttcaa ccaaggcagc cccaaacaag aatcttgttg 6240 tccttggacg catgtttaaa caacagccca agataacaga aaagtcaaag gtgttcgaaa 6300 gaccacttgt gactaaggat catttcatcc ataattatct ggtagcacag actcatgata 6360 actgcgagga acacaagttc tttacagtcg attcaaagac actttctctt tacggtttca 6420 ttgaaggagc cgacccagaa tatgtcagag aagcttttca ctgtgggtta atttcattaa 6480 tctatccagg tgaaaacctc aaggagatct ctcttctccc aaaagacctc tacagggcaa 6540 tcaaaaacta cagaaccaga gtttgtagtg cacagagtag accaatctac ctgagaatca 6600 cgagtacctt cctagagtgg gaaaatgatg acatccttat tccataccac tggattgagg 6660 taggactatc caatggaaaa attccatggg acaagtcata taagaagacc gcaacagtcg 6720 agtatcttcc agagataact gcactcagac ctaaaaggat aaaagcagta tataatcagt 6780 gtactaagat cttcgcagat tcaaagaaga agcttaacta tgctgatgac aagataattc 6840 taataagcaa ttattcagaa ttaatcaagg agaaagaatt aataactctt tcagaatatg 6900 aagcccgctt tacaagtggc cagctagcta tcactgaaaa gacagcaaga caatggtgtc 6960 tcgatgcacc agaaccacat ctttgcagca gatgtgaagc agccagagtg gtccacaaga 7020 cgcactcaga aaaggcatct tctaccgaca cagaaaaaga caaccacagc tcatcatcca 7080 acatgtagac tgtcgttatg cgtcggctga agataagact gaccccaggc cagcactaaa 7140 gaagaaataa tgcaagtggt cctagctcca ctttagcttt aataattatg tttcattatt 7200 attctctgct tttgctctct atataaagag cttgtatttt catttgaagg cagaggcgaa 7260 cacacacaca gaacctccct gcttacaaac catgtattgt agctaaacct cttaggagga 7320 tatcaataaa agccctaaca ggcctttgat tatatcttgg agtcattccc agatctattt 7380 ccctaaccag gaatctgaag acgcccagtc ctggagcgca caattgcctg tagtagcgtg 7440 aatcccgaga gtcaggagga cgttggtagc gaagatcggc atgcgttgga cagaagctga 7500 acagatgatc acagaggaag aggccgtaaa caagccataa tcaacaggta cctgagaagg 7560 taattattga tatcctacct atcaattaat ataaaaaata aaaaattttt caaagccatg 7620 agccatttca tgagcaaggt tgtagaaaac ctcaaataca tccactggga tgatgagaaa 7680 tctcttcagg agatagacat agaactgtta aaacaggtca acttcgagat ccaacaagat 7740 ctagaagaac aagatgaaga aaatcatcca acaattcaga tataccaagc catctgcaag 7800 gttatcaagc agttgaggct caaactcaac aagacttccg catccagcgc aactatccag 7860 agacgtcaaa aatttc 7876 //