ID X96538; SV 1; linear; genomic RNA; STD; VRL; 2692 BP. XX AC X96538; S76059; XX DT 18-MAR-1996 (Rel. 47, Created) DT 16-AUG-2005 (Rel. 84, Last updated, Version 3) XX DE Papaya ringspot virus genes for NIb and coat protein XX KW coat protein; NIb gene; polypeptide. XX OS Papaya ringspot virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RA Liu J.; RT "Construction of cDNA library of Papaya ringspot virus (Chinese severe RT strain) and studies on the structure of viral genome 3'-terminal region"; RL Unpublished. XX RN [2] RP 1-2692 RA Liu J.; RT ; RL Submitted (08-MAR-1996) to the INSDC. RL J. Liu, Institute of Microbiology, Chinese Academy of Sciences, Beijing RL 100080, PROC XX DR MD5; ee9abf84df6acb1031d71993972f7d90. XX FH Key Location/Qualifiers FH FT source 1..2692 FT /organism="Papaya ringspot virus" FT /strain="SM" FT /mol_type="genomic RNA" FT /clone_lib="lambda ZAP-II" FT /db_xref="taxon:12205" FT CDS <1..2472 FT /codon_start=1 FT /product="NIb and coat proteins" FT /note="polypeptide" FT /db_xref="GOA:Q85030" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q85030" FT /protein_id="CAA65383.1" FT /translation="SGGRWLFDKLHGNLKGVSSASSNLVTKHVVKGTCPLFRNYLECDE FT EAKTFFSPLMGHYMKSVLSKEAYVKDLMKYSSDIIVGEVDHDVFEESVTQVVELLNDHE FT CPELEYITDSEVIIQALNMDAAVGALYTGKKRKYFEGSTVEHRQALVRKSCERLYEGRM FT GVWNGSLKAELRPTEKVLAKKTRSFTAAPLDTLLGAKVCVDDFNNWFYSKNMDCPWTVG FT MTKFYKGWDEFLRKFPDGWVYCDADGSQFDSSLTPYLLDAVLSIRLWAMEDWDIGAQML FT KNLYGEITYTPILTPDGTIVKKFKGNNSGQPSTVVDNTLMVLITMYYALRKAGYDAKAQ FT EDMCVFYINGDDLCIAIHPDHEHVLDSFSSSFAELGLKYDFTQRHRNKQDLWFMSHRGI FT LIDDVYIPKLEPERIVAILEWDKSKLPEHRLEAITAAMIESWGYGELTHQIRRFYQWVL FT EQAPFNELAKQGRAPYVSEVGLRRLYTSERGSMDELEAYIDKNFERERGDSPELLVYHE FT SRSTGNCQFVCGSDTHVFHQSKNEAVDAGLNEKLKEKEKQKEEKDKQKVKNDDGTNDGN FT DVSTSTKTGERDRDVNAGTSGTFTVPRIKSFNDKMILPRIKGKTVLNLNHLLQYNPQQI FT DISNTRATQSQFEKWYEGVRNDYGLSDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDG FT ETQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLA FT RYAFDFYEVNSKTPDRAREAHMQMKAAAVRNTNRRMFGMDGSVSNKEENTERHTVEDVN FT RDMHSLLGMRN" FT mRNA <1..1611 FT /gene="NIb" FT /product="NIb protein" FT mRNA 1612..2472 FT /product="coat protein" XX SQ Sequence 2692 BP; 821 A; 473 C; 664 G; 734 T; 0 other; agtggtggtc gttggctctt tgacaaatta cacggcaatc tcaagggagt tagctcagct 60 tccagcaatt tagtcacgaa gcatgttgtg aaaggcactt gtcctctctt caggaattat 120 cttgagtgtg atgaagaagc taagactttc tttagtccgc tgatgggaca ctacatgaag 180 agcgttctaa gcaaggaagc atacgtaaag gacttaatga agtattcaag tgacataatt 240 gttggtgagg ttgatcatga tgtgtttgag gaaagcgtta cacaagttgt cgagttgcta 300 aacgaccacg agtgtcctga gctcgaatac atcacagata gcgaagtcat catacaagct 360 ctgaatatgg atgctgctgt cggagctttg tacacaggaa agaaaaggaa atatttcgaa 420 ggatcaacag ttgagcacag acaagcctta gttcgaaaga gctgtgagcg tttgtatgaa 480 gggcgaatgg gtgtttggaa tggatcacta aaggctgagc tgcgacctac agagaaggtc 540 ttggccaaaa agacaagatc tttcactgca gcgccccttg atactttgtt aggagccaaa 600 gtttgtgttg atgattttaa taattggttc tacagcaaaa atatggattg tccttggact 660 gttggtatga caaaatttta taaaggctgg gacgaatttt tgagaaaatt tcctgatggt 720 tgggtatatt gcgatgcaga tggatctcag tttgatagct ctttgacacc gtacttgtta 780 gatgctgtgt tatcaattcg actgtgggct atggaagatt gggacattgg agctcagatg 840 cttaagaacc tatatggaga gatcacatac acacctattt tgacacctga tgggacaatt 900 gtcaagaaat tcaaaggcaa taatagtgga caaccttcga cagttgttga taacacactg 960 atggttttga tcacaatgta ctacgcgtta cgcaaggctg gttacgacgc gaaagctcag 1020 gaggatatgt gcgtgtttta tatcaatggt gatgatctct gtattgccat tcacccagat 1080 catgaacatg ttcttgactc attctctagt tcatttgctg agcttggact taaatatgat 1140 ttcactcaaa gacaccgaaa taaacaagat ttgtggttta tgtcgcatcg aggtattctg 1200 atcgatgatg tttatattcc caaacttgaa cctgaaagaa ttgtggctat ccttgagtgg 1260 gataaatcta agcttccaga acaccgatta gaagctatca cagcagcaat gatagagtca 1320 tggggatacg gggagttaac gcaccagatt cgtaggtttt atcaatgggt gcttgagcag 1380 gctccattca atgagttagc aaagcaggga agggctcctt atgtgtccga ggttggattg 1440 aggcgcttat acactagtga gcgtgggtct atggatgaat tagaagccta catagataaa 1500 aattttgagc gagaaagggg agattcacct gagctactgg tgtatcatga atcgagaagc 1560 actggcaatt gtcagtttgt ctgcggcagt gacacacatg tgtttcacca gtccaaaaat 1620 gaagccgtgg atgctggttt gaatgagaag cttaaagaaa aagaaaaaca aaaagaagaa 1680 aaagataaac aaaaggttaa aaatgatgat ggtactaatg acggaaacga tgtgtcaact 1740 agtacaaaaa ctggagagag agatagggat gtcaatgccg gaactagtgg gacttttact 1800 gttccgagga taaaatcatt taatgataag atgattttac caagaattaa gggaaaaact 1860 gtccttaatt tgaatcatct tcttcagtat aatccgcaac aaattgacat ctcaaacact 1920 cgcgccactc aatctcaatt tgaaaagtgg tacgagggag tgaggaatga ttacggtctg 1980 agtgataacg aaatgcaggt aatgttaaac ggtttgatgg tttggtgtat cgaaaatggt 2040 acatctccag acatatctgg tgtctgggta atgatggatg gggaaactca agtcgattac 2100 cccatcaaac ctttgattga gcacgcaact ccttcgttta ggcagatcat ggctcacttc 2160 agtaacgcgg cagaagcata catcgcgaag aggaatgcaa ctgagaggta catgccgcgg 2220 tatggaatca agagaaattt gactgacatt agtctcgcta gatatgcttt cgatttctat 2280 gaggtgaatt caaaaacacc tgatagggct cgtgaagctc atatgcagat gaaagctgca 2340 gccgtgcgca acactaatcg cagaatgttt ggaatggacg gcagtgtcag taacaaggaa 2400 gaaaacacgg agagacacac agtggaagat gtcaacagag acatgcactc tctcctgggt 2460 atgcgcaatt gaatacttgc cctagtgtgt ttgtcgggcc tggctcgacc ctgtttcacc 2520 ttataatact atacataagc attagaatat agttgggctg tgccaccgct tctattttac 2580 agtgagggtt gccctccgtg cttttagtat tattcgagtt ctttgagtct ccatacagtg 2640 tgggtggccc acgtgctatt tgagcctctt ggaatgagag aaaaaaaaaa aa 2692 //