ID X96537; SV 1; linear; genomic DNA; STD; VRL; 3006 BP. XX AC X96537; XX DT 18-MAR-1996 (Rel. 47, Created) DT 18-MAR-1996 (Rel. 47, Last updated, Version 1) XX DE Papaya ringspot virus genes for HC, P3 & C1 protein XX KW cI gene; HC gene; P3 gene; polypeptide. XX OS Papaya ringspot virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [2] RA Liu J.; RT "Studies on the genome structures of two potyviruses (papaya ringspot RT virus, soybean mosaic virus) and the genetic engineering strategies for RT virus resistance in transgenic plants"; RL Unpublished. XX RN [3] RP 1-3006 RA Liu J.; RT ; RL Submitted (08-MAR-1996) to the INSDC. RL J. Liu, Institute of Microbiology, Chinese Academy of Sciences, Beijing RL 100080, PROC XX DR MD5; 3fb2f6ee7aa45e8f7f1b495f87b557e7. XX FH Key Location/Qualifiers FH FT source 1..3006 FT /organism="Papaya ringspot virus" FT /strain="SM" FT /mol_type="genomic DNA" FT /clone_lib="lambda ZAP-II" FT /db_xref="taxon:12205" FT CDS <1..>3006 FT /codon_start=1 FT /gene="HC, P3 and CI" FT /product="HC, P3 and CI proteins" FT /note="polypeptide" FT /db_xref="GOA:Q85025" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q85025" FT /protein_id="CAA65382.1" FT /translation="FTCDNQLDRNGNFLWGERQYHAKRFFANYFEKIDHSKGYEHYSQR FT QNPNGIRKIAIGNLIFSTNLERFRQQMVEHHIDQGPITRECIALRNNNYVHVCSCVTLD FT DGTPATSELKTPTKNHIVLGNSGDPKYVDLPTLESDSMYIAKRGYCYMNIFLAMLINIP FT ENEAKDFTKRVRDLVGSKLGEWPTMLDVATCANQLVIFHPDAANAELPRILVDHRQKTM FT HVIDSFGSIDSGYHILKANTVNQLNQFAREPLDSEMKHYIVGGEFDPTTSCLHQLIRVI FT YKPHELRNLLRNEPYLIVIALMSPSVLLTLFNSGAIEHALNYWIKRDQDVVEVIVLVEQ FT LCRKVTLARTILEQFNEIRQNARDIHELMDRNNKPWISYDRSLELLSVYANSHLTDEGL FT SKQGFSTLDPRLREAVEKTYAALLQEEWRALSLFQKLHLRYFAFKSQPSFSEYLKPKGR FT ADLKIVYDFSPKYCVHEVGKALLQPIKAGAEVASRVINGCGTFIRKSAARGCAYIFKDL FT FQFVHVVLVLSILLQIFRSAQGIATEHIQLKQAKAEVEKQKDFDRLEALYAELCVKGGE FT QPTREEFLDFVIEREPRLKDQLYNLIYIPVIHQAKSNNEKKLEQVIAFITLILMMIDVD FT KSECVYRILNKFKGVINSSNTNVYHQSLDDIRDFYEDKQLTIDFDITGENQINRGPIDV FT TFEKWWDNQLSNNNTIGHYRIGGTFVEFSRTNAATVASEIAHSPEREFLIRGAVGSGKS FT TNLPFLLSKHGNVLLIEPTRPLCENVCKQLRGDAFHCNPTIRMRGLTAFGSTNITIMTS FT GFALHYYAHNIQQLRLFDFIIFDECHVIDSQAMAFYCLMEGNAIEKKILKVSATPPGRE FT VEFSTQFPIKIVTEQSISFKQLVDNFGTGANSDVTALADNILVYVASYNEVEQLSKLLS FT DKGYLVTKIEGRTMKVGKTEISTSGTKSKKHFIVATNIIENGVTLDIEAVIDFGLKVVP FT EMDSDNRMIRYSK" FT mRNA <1..792 FT /gene="HC" FT /product="HC protein" FT mRNA 793..1983 FT /gene="P3" FT /product="P3 protein" FT mRNA 1984..>3006 FT /gene="CI" FT /product="CI protein" XX SQ Sequence 3006 BP; 939 A; 563 C; 678 G; 826 T; 0 other; tttacgtgtg ataatcaatt ggacagaaat ggaaatttct tatggggtga gagacaatac 60 cacgccaaaa gattctttgc taattacttt gagaagattg atcacagtaa gggctatgag 120 cactatagtc aacgccaaaa cccaaatggc attcgaaaga ttgcaatcgg taacctaata 180 ttctccacaa atttagagag gtttcgacag caaatggtcg aacatcatat tgatcaagga 240 ccaatcaccc gtgagtgtat agctctgcgc aacaataatt acgttcatgt atgtagctgc 300 gtgaccttag atgatggaac tccagcaaca agtgaattga aaacacccac caagaatcac 360 attgttcttg ggaattctgg agatcctaaa tatgttgatt tgccaactct tgagtcagat 420 tcaatgtata tagctaagag aggttattgc tacatgaaca tcttcctggc gatgctcata 480 aacatacctg agaatgaggc gaaggacttt acaaagaggg ttcgcgatct tgtgggttct 540 aaacttggag agtggccaac gatgttagat gtcgcgacat gtgccaatca attggttatt 600 ttccatcccg atgcggccaa cgcggaattg ccacgaatct tagtggatca ccgacagaaa 660 acaatgcatg tcattgattc atttggatcg atagattctg gatatcatat attgaaagca 720 aacacagtga atcagctaaa tcagtttgct agagagccac tcgatagtga aatgaagcac 780 tacattgttg gtggagaatt cgatccaact actagttgct tgcatcagct aatacgcgtc 840 atttacaagc ctcatgaact ccgaaatcta ctcagaaatg agccgtatct aatagtgatt 900 gcactgatgt caccaagcgt actcttaact ctatttaata gtggtgcaat tgagcatgca 960 ttgaattatt ggatcaaaag agatcaagat gtcgtcgagg ttattgtttt agtagagcaa 1020 ttgtgcagga aggtgacgct tgctagaaca atcctggagc agtttaacga aattcgccag 1080 aacgcaagag acatacatga gctaatggat cgaaataata aaccttggat ttcatatgat 1140 cgatcattag agctattgag tgtgtacgcg aattcgcatt tgacggatga aggcctgtct 1200 aagcaaggat tttcaacact ggatcctcga ttgcgtgaag ctgttgaaaa aacctacgcc 1260 gctctcttgc aggaagagtg gcgtgcttta agtttgtttc aaaagttgca cttaaggtac 1320 tttgcattca aatcacaacc atctttttcc gagtatttaa agccaaaagg gcgcgcagat 1380 ttaaaaattg tgtacgactt ctcaccgaag tactgtgtac acgaggtcgg aaaagcattg 1440 ctacagccaa tcaaagctgg agctgaagtc gcgtcgcgtg tcataaacgg ttgtggaacg 1500 ttcattcgga aaagtgccgc aagaggctgt gcttacattt ttaaggacct tttccagttc 1560 gttcacgtag tattagtgtt aagcatttta ttacaaatat ttagaagcgc acaaggaatt 1620 gccacagagc acatacaatt aaagcaagca aaagcagagg tggaaaagca gaaagatttt 1680 gatcggctgg aagctttata cgctgagttg tgcgttaagg gtggcgaaca gccgacgcgt 1740 gaagaatttc tcgattttgt gatagagcgt gaaccaaggc tcaaggatca gctttacaac 1800 ttgatttaca taccagttat tcatcaagca aaatcgaaca atgaaaagaa actcgaacaa 1860 gtcattgcat ttatcacatt aattttgatg atgattgatg tggacaagag tgagtgcgtt 1920 tacagaattt taaacaagtt taaaggcgta ataaattcta gcaatacaaa cgtttatcat 1980 cagtctttgg atgacattcg ggacttctat gaagataagc aattgactat tgactttgac 2040 atcactgggg aaaatcaaat taatcgtggg cctatagatg tcacgttcga gaagtggtgg 2100 gacaatcaac tgtccaataa caacacaatt ggtcattacc gaattggagg aacattcgtt 2160 gagttctcac gaacgaacgc agccactgtg gctagtgaaa tagctcatag tcctgaacgg 2220 gaattcctaa ttcggggagc ggttggtagt ggtaaatcaa cgaatcttcc gttcttactt 2280 agcaagcatg ggaatgtgtt gttaatagag cccaccaggc ccctttgcga aaatgtttgc 2340 aagcaactgc gtggtgacgc gtttcattgt aatccaacca tccgcatgcg tggactaacg 2400 gcttttggtt cgaccaatat cacaatcatg acgagcggat ttgccttgca ttattatgct 2460 cataacattc aacaattaag gctctttgat ttcataatct ttgatgaatg tcatgtcata 2520 gatagccaag caatggcctt ttattgtctg atggagggta acgcgattga gaagaaaatt 2580 cttaaagttt ctgccacgcc acctgggcgt gaggttgagt tctcaacgca attcccaata 2640 aaaattgtca ctgagcagtc tataagcttt aagcagttgg tcgataattt cggtactggt 2700 gcgaatagtg atgtgactgc cttggcggat aacatactgg tctatgttgc gagctataat 2760 gaagtggaac aactaagcaa gcttttgtcc gacaaaggct acttagtaac caaaattgag 2820 gggagaacaa tgaaggttgg aaaaactgaa atttccacta gcggcacaaa gtccaagaag 2880 cactttatag ttgccacaaa cattatagag aatggcgtca cacttgatat agaagccgtt 2940 attgactttg gattgaaagt agtgcctgag atggactcag acaatcgcat gattaggtat 3000 tcgaag 3006 //