ID   X89711; SV 1; linear; genomic RNA; STD; VRL; 1874 BP.
XX
AC   X89711;
XX
DT   26-JUL-1995 (Rel. 44, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 2)
XX
DE   Leek yellow stripe potyvirus genomic RNA for partial nuclear inclusion
DE   protein and coat protein
XX
KW   coat protein; nuclear inclusion protein; polyprotein.
XX
OS   Leek yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RA   Schubert J.;
RT   "Sequence of the 3'-terminal region of the RNA of leek yellow stripe
RT   potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1874
RA   Schubert J.;
RT   ;
RL   Submitted (14-JUL-1995) to the INSDC.
RL   J. Schubert, Bundesanstalt fuer Zuechtungsforschung, Inst f
RL   Resistenzforschung, Theodor Roemer Weg 4, 06449 Aschersleben, FRG
XX
DR   MD5; 121a49f92e336558b8c05ab5fb669632.
XX
CC   Related sequences D28590 and D28591
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1874
FT                   /organism="Leek yellow stripe virus"
FT                   /host="Allium ampeloprasum var. porrum"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:42004"
FT   CDS             <1..1274
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q83108"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q83108"
FT                   /protein_id="CAA61855.1"
FT                   /translation="FDNRTRDKEALCFMSHMGILQNDIYIPKLDKERIVSILEWDRAQQ
FT                   PEHRLEAICAAMIEAWGYPDLLDRIRKFYCWVLEQAPYSELSALGKAPFISEAALRNLY
FT                   TDCEATEADVARYLELYDSDPAIEDTFVFQAGDELDAGMQTNKKQTDNTDKSIEQRSPV
FT                   APRTSTQGGNDGGSSSELSGTKDRDVNVGTTGTFSVPRIKQIPQKGISIPMDGGKSILT
FT                   LDHLLQYKPSQLNISNTRATAAQLKTWIERVQEDYGVTKDDMGVILNGLMVWCIENGTS
FT                   PNINGTWTMMDGDEQVVYPLRPIVEHAKPTLRQIMAHFSALAEAYIEMRNSEQAYMPRY
FT                   GLQRNLTDMGLARYAFDFYEVTSRTPVRAREAHAQMKAAALRNSRSRLFGLDGNVTTTD
FT                   EDTERHTAHDVNARMHHLDGAHMQ"
FT   mat_peptide     <1..404
FT                   /codon_start=3
FT                   /product="nuclear inclusion protein"
FT   mat_peptide     405..1274
FT                   /product="coat protein"
XX
SQ   Sequence 1874 BP; 590 A; 367 C; 449 G; 468 T; 0 other;
     atttcgacaa tcgaacacgt gacaaagagg cgctgtgctt catgtcacac atgggcattc        60
     tacaaaacga catttatata ccaaaattgg acaaggagcg aatagtgtca atactggaat       120
     gggatcgcgc tcagcaacct gaacatagac tagaagccat ctgtgcagcc atgatcgaag       180
     catggggtta tccggatcta ttggatcgta ttcgaaaatt ttattgctgg gtgttagaac       240
     aagcaccata cagtgaattg agtgccttag gtaaagcgcc attcatttct gaagcagccc       300
     tacgaaatct ttacactgac tgtgaggcaa cggaagcgga cgtggcacgg tatctcgaac       360
     tttatgatag cgatccagcc atagaagaca catttgtgtt tcaagctggt gatgaactag       420
     atgcaggtat gcaaacgaat aagaaacaga cagacaacac agacaagtcc attgaacaac       480
     gaagcccggt agcaccacga actagcacac aaggtgggaa tgatggtgga agtagttcag       540
     aattgagtgg aaccaaagat agggatgtaa atgttggcac cacaggaact tttagtgtgc       600
     cacgaattaa acaaataccg cagaaaggta tatcaattcc tatggatgga ggtaagtcaa       660
     tactaacttt ggatcaccta ttacagtata aaccaagtca gttgaacata tccaacacaa       720
     gagctacagc agcgcaattg aagacttgga tagagagagt gcaagaggac tatggcgtta       780
     ctaaggatga tatgggagtt attctgaatg ggctaatggt gtggtgtatt gagaatggaa       840
     catcaccaaa tataaacgga acttggacaa tgatggatgg cgacgagcaa gttgtatatc       900
     ctttacgacc aattgtggaa cacgcgaaac caaccttacg acagataatg gcacatttct       960
     ccgcacttgc agaagcttat attgagatga gaaactcaga gcaagcatat atgccaaggt      1020
     atggtttaca aagaaattta acagacatgg gtctcgcacg gtatgcattt gacttttatg      1080
     aagtcacatc aagaacacca gttagagcgc gcgaggctca cgcacaaatg aaagcagcgg      1140
     ccttgcggaa ttcaaggtca agactgtttg gactagacgg taacgtcaca accacggatg      1200
     aggacacgga gaggcacaca gcacatgacg tgaatgcacg gatgcaccat cttgatggtg      1260
     cgcatatgca gtgatgtttc ggttagcaac cggttatggg cttccacgta aaaagtcccg      1320
     agtgccaaac ttgtattttg gctagtgtag tgaagctatg attcactcgt tcaaggcagt      1380
     ttctacttta aggatgactt gggaattagt agctcccaat gccgaccaca atggtggtca      1440
     ccaagagtca acacttggtt tgaagttgat cgtctgaaga tctatccgga gtacggtttt      1500
     gtaaagaagg tgaattcatc ttttaaggat ggtaagtctg aaaccataat ggtgtataag      1560
     cagcctgaat tttgataccc cacctttacc ctacgatgga gtgctacttt aaagactagc      1620
     taggattgag accgaaatct cacgtgctgg cacggccagt agttgatcac ttaatgatca      1680
     gttgactact tcacagtcaa gttggaaccc gtagtatcct atccttacct aatatcgtaa      1740
     gttttattta ctggtgtagc gtggttcgac caccttataa acactttgaa tattaggatc      1800
     aagctgagca tttgaagaca cttagtgtgg tttgaccatg tgtgtgttcc tatgtctcag      1860
     taagagacaa aaaa                                                        1874
//