ID X87115; SV 1; linear; genomic RNA; STD; VRL; 4415 BP. XX AC X87115; XX DT 13-DEC-1995 (Rel. 46, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Pothos latent virus genes for replicase, capsid protein and movement DE protein XX KW capsid protein; movement protein; readthrough protein; replicase. XX OS Pothos latent virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Aureusvirus. XX RN [1] RX PUBMED; 7595391. RA Rubino L., Russo M., Martelli G.P.; RT "Sequence analysis of pothos latent virus genomic RNA"; RL J. Gen. Virol. 76:2835-2839(1995). XX RN [2] RP 1-4415 RA Russo M.; RT ; RL Submitted (09-MAY-1995) to the INSDC. RL M. Russo, Centro Virus Virosi CNR Bari Italy, Via Amendola 165/A, I70126 RL Bari, ITALY XX DR MD5; a9afe44967afbfd188c4530357a60a5b. DR EuropePMC; PMC1370487; 13130137. DR EuropePMC; PMC1866121; 17267504. DR EuropePMC; PMC516415; 15367615. DR RFAM; RF00171; Tombus_5. XX CC Overlaps teh submitted by Russo M. Adv. Virus Res. CC 144:381-428,1994 XX FH Key Location/Qualifiers FH FT source 1..4415 FT /organism="Pothos latent virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:44562" FT CDS 141..809 FT /gene="orf" FT /function="unknown" FT /db_xref="GOA:Q84830" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:Q84830" FT /protein_id="CAA60595.1" FT /translation="MANWCVKVLMFPFVTVYTIVTSLGRGIRRGFRACVDEVENIYGDM FT CAGFRVALSKLSVSWIVVVGMIFVLNSLVVGLVPTLTMAAIIAACVGAKYGGRVPRYIR FT AHVDRIRKSWEKGVDDDDCCAPLPETSLERVPVKLRPRLACKIAVRAIAKVGLLKRSEA FT NSMVYQRVCLDVMESMKMRWHDRLVILPQAVLACLERPEEVEEVMKAIEASCKGPFDVY FT " FT CDS 141..2363 FT /transl_except=(pos:807..809,aa:OTHER) FT /product="replicase" FT /note="readthrough stop codon" FT /db_xref="GOA:Q84831" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:Q84831" FT /protein_id="CAA60596.1" FT /translation="MANWCVKVLMFPFVTVYTIVTSLGRGIRRGFRACVDEVENIYGDM FT CAGFRVALSKLSVSWIVVVGMIFVLNSLVVGLVPTLTMAAIIAACVGAKYGGRVPRYIR FT AHVDRIRKSWEKGVDDDDCCAPLPETSLERVPVKLRPRLACKIAVRAIAKVGLLKRSEA FT NSMVYQRVCLDVMESMKMRWHDRLVILPQAVLACLERPEEVEEVMKAIEASCKGPFDVY FT XGCLLQHRGYNTAITSVIPDGVLLNHEGMVVRKGAPITNERRWYSFAGYASTYEYIVHN FT SSLVNVCRGLVERVFCVVRDGKLQRPLRPKNNVFERKLGNIGRKISSIVGYCPAMTRSE FT FCDSYSGTRRATYERARLSLDVLPCTRKDAYLKTFVKAEKINITLKPDPAPRVIQPRDP FT RINVEVGRYLKPLEPRLMKAIDKLWGEKTAIKGYTVEKVGEILHQKSLRFKNPCFVGLD FT ASRFDQHCSRQALEWEHSVYNAIFRDPYLSELLTWQIDNVGTAYLKDGFVRYRVDGCRM FT SGDMNTSMGNYLIMSCLVYQFCKDIGVDASLANCGDDCVLYLEKEDLPKLKALPDWFEK FT MGYSMKVEKPVFTVEEIEFCQQHPVQLSRGYVMVRRPDVCLTKDLLPFVRGGMTTERLQ FT RWLYAQHDGGLALAGDCPVLGAFYQRFPSGESHGELSEYSDAHKFKAGKQYGEITSLAR FT YSFWLAFGITPDEQLAIERDLMNWTPNVVLGSCDPRPTLLDYCSDN" FT CDS 2375..3496 FT /product="capsid protein" FT /db_xref="GOA:Q84832" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q84832" FT /protein_id="CAA60597.1" FT /translation="MALVKRNNNMALIASEAGKLAAIKAGQVMLSPAGRELIWNGVNWV FT RRKLGRSKKSDVILHPGVLPGAIAAPVANTRIIRASKPKFTRSKGSVTIAHRELLGQFN FT NSSGLVVNGGVSGNVYRINPSNPVVFPWLQGIAASFDQYKFDRVQLQYVPMCATTETGR FT VAIYFDKDSQDVEPADRDELAIMAHLTESAPWCESTLSIPVDNIKRFMNDNTTTDPKLV FT DLGQIGLATYGGGSTNPVGDLFIHYTITLFEPQPLASLVETEQTGTGAAPFGANLVTVS FT SNATITIYTFEGPGVYLLALSQRAASFTTFVTAGGAVVNSHTTTITSGPAYQSICEYYC FT CYTWGSITYNGTLFGNYTLQVTRAKISNNATLI" FT CDS 3591..4319 FT /product="movement protein" FT /db_xref="GOA:Q84833" FT /db_xref="InterPro:IPR005332" FT /db_xref="UniProtKB/TrEMBL:Q84833" FT /protein_id="CAA60598.1" FT /translation="MEIQSLDGILGEELAIQNEVKKILLSHKTTKAILPLAPISQFSKW FT KIPKQGFYAPIDVKFVLTPHISERAQVRGVVKLVDSRDLSPSRELYRSKEFNIGHGLVI FT EGSQLPFCLPVGDYPLQFEVTVLQSQFRETANLYSTSVEWRMMSSTTPLSRVRSVMGAA FT QQPAMKLQPNFKMSLESSKGGGMKSHQKKNSKPNGHSRRGNLSGEVGGSSSSLPSGAQT FT GEWIDNDYGDSLSEYSGVSA" FT CDS 3722..4114 FT /gene="orf" FT /function="unknown" FT /db_xref="UniProtKB/TrEMBL:Q84834" FT /protein_id="CAA60599.1" FT /translation="MENSQTGVLCPNRCQVCSHTTYIRESSGQGGRQACRFTRFVTQPR FT VVSEQGIQYRSWLSDRGFPITLLSTSGGLSTTIRGHGVAITIQGDSKSLLNFCRVAYDV FT FHHPVVQSEVCHGSGPATSDEITTKF" XX SQ Sequence 4415 BP; 1129 A; 937 C; 1143 G; 1206 T; 0 other; agaataacta ctataagcct aaccagcttg ttgagagttg tggagccatc catatagtta 60 ttctctcgct cagcttttgt tgtgtgggtt tgaaggacca gtctatcact ttgtgaggat 120 aaattgtaac tgtggtcaaa atggcgaatt ggtgtgtgaa agttcttatg tttcctttcg 180 ttactgttta cacgattgtg acttcccttg ggcggggcat tcgacgcggc tttcgagcct 240 gtgtggatga agttgagaac atctatggag acatgtgtgc tggattcagg gttgccctga 300 gcaaacttag tgtctcctgg atagttgtcg tgggcatgat atttgttctt aacagtctcg 360 tggtaggcct cgttcctacc ctgaccatgg ctgctattat tgcggcctgt gtcggggcaa 420 agtacggggg tcgtgttcca cgatacattc gggcccatgt ggacagaata cgaaaatcct 480 gggagaaagg ggtagatgac gatgactgtt gtgctccgtt acctgaaaca tccctcgaga 540 gggtgcccgt taagcttagg cctagactag cttgtaagat tgctgttagg gccatagcca 600 aggtggggct acttaagagg agtgaggcca actccatggt ttaccagaga gtgtgcctcg 660 atgtcatgga aagcatgaaa atgcggtggc acgacaggct cgtcatcctc cctcaagcgg 720 ttcttgcttg cctggagagg ccagaggaag tcgaagaagt catgaaagcc attgaggcgt 780 cctgcaaggg accgtttgat gtctactagg ggtgcctatt acaacaccgt ggttataaca 840 ctgccatcac tagcgtcata ccagatggag tgttattgaa ccacgaaggg atggtggtac 900 gtaaaggagc ccctatcacc aatgaacgaa gatggtactc atttgctggg tatgccagta 960 cctacgagta cattgtgcat aattcatcac ttgtcaacgt ttgtcgtggt ttagttgaac 1020 gagtgttttg cgtcgtgcga gacggtaaat tgcagcgacc tctgcgcccc aaaaataatg 1080 tttttgagag gaagcttggt aatattggtc gtaaaatcag ctcaattgtt gggtactgcc 1140 ccgctatgac acgcagtgaa ttctgtgatt cttatagcgg cacgcgacgt gccacgtatg 1200 agcgagcaag attgtccttg gatgttctcc cctgtacccg caaagatgct tatctgaaga 1260 cttttgttaa ggcggagaag atcaatatta cacttaaacc cgaccccgca ccccgggtca 1320 ttcagccacg tgaccccagg atcaatgtgg aagtgggacg ttacttgaag cctcttgaac 1380 ccagattgat gaaggctatt gataaattat ggggggaaaa gacggcaatt aagggataca 1440 cagttgagaa ggttggggag atcttacacc agaaatcact taggtttaag aacccatgct 1500 ttgttggtct tgacgcttca cgttttgacc agcactgttc caggcaggca cttgagtggg 1560 aacattcagt gtacaatgcc attttccggg atccttactt atccgaactg ttgacttggc 1620 agattgacaa tgttggtact gcttatctaa aagatgggtt tgtgaggtat cgtgtagatg 1680 gttgccgtat gtctggggac atgaacacta gcatgggtaa ttacctcatc atgtcttgtt 1740 tggtctacca gttttgtaag gacattggcg ttgacgctag tcttgccaat tgtggtgatg 1800 actgtgtact ctatttggag aaggaggacc tacctaagct gaaggcacta cctgattggt 1860 ttgaaaagat ggggtattct atgaaggtgg aaaaacccgt ctttaccgtt gaggaaattg 1920 agttttgcca acaacacccc gtgcagctta gtagaggtta tgtaatggtt aggcggccag 1980 acgtctgttt gacaaaagat ttgttgccgt ttgtccgtgg aggtatgaca acggagagac 2040 tccagcgttg gttgtatgct caacacgatg gtggattggc ccttgcgggt gattgccctg 2100 tgttgggagc gttttaccaa cgttttccca gtggtgagtc ccatggggag ttgtctgaat 2160 attctgacgc acataagttt aaggccggta agcagtatgg agaaatcaca agtcttgctc 2220 gttatagttt ctggttggcc ttcggcatca cgccggatga gcaacttgct atagagcgcg 2280 acctaatgaa ttggactccc aatgtggtgc ttggttcttg tgacccacgg cccacattgt 2340 tggactactg ctcagataac tgaccattat caccatggca ctcgtgaaac gaaataataa 2400 tatggcgttg attgcttccg aagcagggaa gttagcagct attaaagctg gacaagttat 2460 gcttagtcca gcgggaagag aattgatttg gaatggcgtg aattgggttc gacggaagtt 2520 agggagatct aagaagtcag atgttattct ccacccaggt gttttaccag gtgccattgc 2580 tgcgcctgta gctaataccc ggatcatcag agcatccaag cctaagttca cacgtagcaa 2640 gggatctgta actattgccc atcgtgagtt gttaggacaa ttcaataact cctcggggct 2700 tgtggtaaat gggggcgttt ctggtaatgt gtacaggatt aatcctagta acccagtcgt 2760 cttcccatgg ttgcaaggga tagccgctag ttttgatcaa tataagttcg atagggtaca 2820 gctacaatat gttcccatgt gtgccaccac tgaaacaggc agagtagcaa tctacttcga 2880 taaggactca caagatgttg aacctgcaga tcgggatgaa ttggcaatca tggcccattt 2940 gacagaaagt gcaccatggt gtgagagcac ccttagtata cctgttgaca acataaagcg 3000 gtttatgaac gacaacacca caactgaccc aaagctcgtg gatcttggac agattgggtt 3060 agcaacatat ggaggtggaa gcacgaatcc tgttggtgat ctctttatac actacacaat 3120 taccttgttc gaaccacaac cactagctag cttggtagag acagagcaga ccggcactgg 3180 tgcggcacct tttggtgcca atcttgtgac agtttctagt aacgcgacga tcaccatcta 3240 cacctttgaa ggtcctggtg tgtatctgtt agctttgtca caacgtgcag cctcttttac 3300 cacgtttgtt actgctggtg gtgctgttgt caattcacac acgactacta ttacctctgg 3360 accagcgtac caatcaattt gcgaatatta ctgctgctat acctgggggt ccataactta 3420 caatggtaca ttgtttggaa attacacact ccaggttacc cgggccaaaa tttctaacaa 3480 cgcaactttg atatgagtga ccatgcttgg gtgcgaaagt aggatggagg aatgatacct 3540 ggcaatgtct gggttgacca cttagtggct taagaagtct gaccagcttt atggaaatac 3600 aatctcttga cggaatactg ggtgaagaac ttgccataca gaacgaagtc aagaaaatac 3660 tgttgagtca taaaactacc aaagccatac taccattagc gcccatctca caattctcta 3720 aatggaaaat tcccaaacag gggttttatg ccccaataga tgtcaagttt gttctcacac 3780 cacatatatc agagagagct caggtcaggg gggtcgtcaa gcttgtcgat tcacgcgatt 3840 tgtcacccag ccgcgagttg tatcggagca aggaattcaa tatcggtcat ggcttagtga 3900 tcgagggttc ccaattaccc ttctgtctac cagtggggga ttatccacta caattcgagg 3960 tcacggtgtt gcaatcacaa ttcagggaga cagcaaatct ctactcaact tctgtcgagt 4020 ggcgtatgat gtcttccacc accccgttgt ccagagtgag gtctgtcatg ggagcggccc 4080 agcaaccagc gatgaaatta caaccaaatt ttaagatgtc gctggaatca tccaagggcg 4140 gtggcatgaa gtcacatcag aagaaaaata gtaagcctaa tggccatagt aggaggggta 4200 atctatctgg ggaagttggt ggttcttctt cctccttgcc ctcaggtgca cagactgggg 4260 agtggataga taatgactat ggagacagct tatctgagta ttctggtgtg tcagcatagc 4320 acaccccagg tgtcataccc tgaagtttag taaggggggc tataaatgac gcttggtttt 4380 acctgaaatc ccttccatgc tttgcatggt agccc 4415 //