ID X84735; SV 1; linear; genomic DNA; STD; VRL; 2861 BP. XX AC X84735; XX DT 28-JUN-1996 (Rel. 48, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Tomoato pseudo-curly top virus complete DNA sequence XX KW coat protein. XX OS Tomato pseudo-curly top virus OC Viruses; Geminiviridae; Topocuvirus. XX RN [1] RX DOI; 10.1006/viro.1996.0264. RX PUBMED; 8638404. RA Briddon R.W., Bedford I.D., Tsai J., Markham P.G.; RT "Analysis of the nucleotide sequence of the treehopper-transmitted RT geminivirus, tomato pseudo-curly top virus, suggests a recombinant origin"; RL Virology 219(2):387-394(1996). XX RN [2] RP 1-2861 RA Briddon R.W.; RT ; RL Submitted (13-FEB-1995) to the INSDC. RL R.W. Briddon, Dept. of Virus Research, John Innes Inst., Colney Lane, RL Norwich, NR4 7UH, UK XX DR MD5; bfe8cd10af8cca0b883f4270ab8792e2. DR EuropePMC; PMC387707; 15078963. DR EuropePMC; PMC5770407; 29375528. DR EuropePMC; PMC6089449; 30102735. XX FH Key Location/Qualifiers FH FT source 1..2861 FT /organism="Tomato pseudo-curly top virus" FT /lab_host="Solanum nigrum" FT /mol_type="genomic DNA" FT /clone="K77B-11" FT /tissue_type="leaf" FT /db_xref="taxon:49267" FT CDS 193..483 FT /gene="ORF V2" FT /db_xref="GOA:Q88887" FT /db_xref="UniProtKB/Swiss-Prot:Q88887" FT /protein_id="CAA59222.1" FT /translation="MATTNCRICGSSFACPINERFSVCESRGATLSDFLLYFRRKYIET FT SPGLISYLNALQAEINELFSAIKEVSRSEIRHGSCEDKCQPSSIQKGKAEA" FT CDS 353..1081 FT /gene="orf1" FT /product="coat protein" FT /db_xref="GOA:Q88886" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/Swiss-Prot:Q88886" FT /protein_id="CAA59221.1" FT /translation="MPYKRKLTSYFPQSKRFRGAKSGMAVVKTSASRRLYKKGKRKPDR FT IKTYTYAFSSICTDKGTIVYMNSWSLGLGPQQRSSDIEILKSMYIRLTVALSENAASQV FT KTYVVKWALIVDQVPGETLVGVADVYKTCPSPYPYVQCAYIADDNHSRFQVLRSGFLSL FT SGNGLAVGSSTRTGCPAMKNMASINKFCKNLNVRCVYDADSATGDIASIKRGAVYLVIW FT PDVEIRYGFSCTMYHRNGNA" FT CDS complement(1090..1494) FT /gene="ORF C3" FT /db_xref="GOA:Q88890" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/Swiss-Prot:Q88890" FT /protein_id="CAA59225.1" FT /translation="MDSRTGELLTYTQCQTGCYFDDIKNPIYFRLQNTTTMATGNKIIT FT LQIRANHNLRKVLGLQICWLNLVVLSVSPRLSGEALLDRFKFHVMKHLNNLGVISINNV FT IRSINHFIDLFDQRVFYAPSFYYNIKMRLY" FT CDS complement(1244..1723) FT /gene="ORF C2" FT /db_xref="GOA:Q88889" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/Swiss-Prot:Q88889" FT /protein_id="CAA59224.1" FT /translation="MVLCDKGAHELGNREIRKGFCERCLYPEYFDDEEAATTTPTIKKR FT PPKLTWAPKKKRRKAIHLSCGCSYYGGIDCEDGFTHRGITHVHTVPDWLLLRRHQEPNL FT LPPPEHNNNGDGEQNNNITNQSQPQPAESVGSPDLLAELGGTFSITSSEWRSIIR" FT CDS complement(1710..2759) FT /gene="ORF C1" FT /db_xref="GOA:Q88888" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/Swiss-Prot:Q88888" FT /protein_id="CAA59223.1" FT /translation="MPSNPKRFQIAAKNYFLTYPNCSLSKEEALDQLQRLQTPTNKKYI FT KVARELHENGEPHLHVLIQFEGKFNCKNQRFFDLVSPTRSTHFHPNIQGAKSSSDVNSY FT VDKDGDTIEWGEFQIDARSARGGQQTANDECAEALNRSSKEEALQIIKEKLPKDFLFCY FT HNLVSNLDRIFTPAPTPFVPPFQLSSFTNVPEDMQEWADDYFGVSAAARPMRYKSIIIE FT GESRTGKTMWARSLGPHNYLSGHLDFNSRVYSNSALYNVIDDVTPHYLKLKHWKELIGA FT QRDWQSNCKYGKPVQIKGGIPSIVLCNPGGDTSFQDFLDKEENEALKDWTLYNAVFIKL FT TEPLYDGTV" FT CDS complement(2342..2599) FT /gene="ORF C4" FT /db_xref="GOA:Q88891" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/Swiss-Prot:Q88891" FT /protein_id="CAA59226.1" FT /translation="MGNLISMCLYNSKGNSTAKINDSSTWYPQPGQHISIRTYRELNPA FT PTSTPTSTRTETLSNGENSRLTLDLLEEASRQLTTNVQRP" XX SQ Sequence 2861 BP; 727 A; 565 C; 626 G; 943 T; 0 other; accggagtgc cctccctggc cctttaaaat gtgggtccca catgagggta ttgttgtcta 60 ttcactctat caattcccgc tcaattattg ggcctctgtt cactaaggcc ttataaggcc 120 cttaatgaat tgggccccaa gtttgtcttt atctgcagct ttatataaag ctgcagttgc 180 tttcttaaag taatggccac cacaaattgt cggatttgtg ggtcctcttt tgcctgcccc 240 attaacgaac gcttcagcgt ttgtgaatct cgaggagcta ctctgagtga ttttttgctg 300 tattttcgta gaaaatacat agaaacttcc ccgggtttga tttcctatct caatgcctta 360 caagcggaaa ttaacgagtt attttccgca atcaaagagg tttcgcggag cgaaatccgg 420 catggcagtt gtgaagacaa gtgccagccg tcgtctatac aaaaagggaa agcggaagcc 480 tgaccgtata aaaacatata cgtatgcatt ctctagtatt tgtactgata aaggtacaat 540 tgtatatatg aacagctggt ctttgggttt gggtcctcaa cagcgtagca gtgacatcga 600 gattttgaag tcgatgtata ttcgccttac tgttgctctg tctgaaaatg ctgcttctca 660 agtgaagacc tatgtggtta aatgggctct aattgtggat caggttcctg gtgaaaccct 720 agttggtgtg gcggatgtgt acaagacttg tccctctcct tatccttatg tgcagtgtgc 780 ctatattgct gatgataatc acagtcgttt ccaagtgctg aggagtgggt ttcttagtct 840 tagtggtaat ggtcttgcag ttggatcttc tactagaact ggatgtccgg cgatgaagaa 900 tatggcctct attaacaaat tttgtaaaaa tttaaatgtt agatgcgttt atgacgcaga 960 tagtgctact ggcgatatcg ccagtattaa gcgcggtgcc gtttatcttg taatctggcc 1020 tgacgttgaa atccgttatg gattttcatg tactatgtat catagaaatg gaaatgcgta 1080 atagagtgtt taatacaatc tcatctttat attataataa aaacttggag cataaaatac 1140 acgctgatca aataaatcaa tgaagtgatt tatcgatcta attacattat ttatactaat 1200 aacacctaaa ttattcaaat gtttcattac atgaaattta aatctatcta ataatgcttc 1260 tccactcaga cgaggtgata ctgaaagtac caccaagttc agccaacaaa tctggagacc 1320 caacactttc cgcaggttgt ggttggctct gatttgtaat gttattattt tgttccccgt 1380 cgccattgtt gttgtgttct ggaggcggaa gtaaattggg ttcttgatgt cgtcgaagta 1440 acagccagtc tggcactgtg tgtacgtgag taattcccct gtgcgtgaat ccatcctcac 1500 agtctatgcc tccgtagtat gagcagccgc aggagaggtg aatggccttt cgtctctttt 1560 tcttcggtgc ccaagtcagt ttggggggtc gttttttgat agttggagtt gttgttgcag 1620 cttcttcgtc gtcaaagtat tctgggtata agcacctttc gcagaaaccc ttccttatct 1680 ccctatttcc taattcgtgc gcgcctttgt cacacagtac catcgtataa gggttcagtc 1740 agttttatga atacagcatt atagagtgtc caatctttta aagcctcatt ctcttcctta 1800 tcgaggaagt cttggaaaga ggtgtcccca ccagggttgc aaaggactat tgatgggatg 1860 ccacctttaa tttgaactgg ctttccatat ttacagtttg actgccagtc tctctgggcc 1920 ccaatcagct ctttccagtg ctttaacttt aaatagtgcg gtgtgacgtc atcaatgacg 1980 ttatacaagg cactatttga atacactctg ctgttaaaat ctaagtggcc ggataaataa 2040 ttatgtgggc ccaagctcct agcccacatt gtcttgccgg tcctagactc accctcaatt 2100 ataatacttt tatatctcat aggccgcgca gcggcactaa ctccaaaata atcatccgcc 2160 cattcttgca tatcttcagg aacgttagta aatgaagata attgaaacgg agggacaaac 2220 ggagttggtg ccggagtaaa aatcctatct aagttagaaa ctaaattatg ataacaaaat 2280 aaaaaatctt taggcaattt ttcttttata atttgtagag cttcctcttt tgaggaacgg 2340 tttagggcct ctgcacattc gtcgttagct gtctgctggc ctcctctagc agatctagcg 2400 tcaatctgga attctcccca ttcgatagtg tctccgtcct tgtcgacgta ggagttgacg 2460 tcggagctgg atttagctcc ctgtatgttc ggatggaaat gtgttgacct ggttggggat 2520 accaggtcga agaatcgttg atttttgcag ttgaatttcc cttcgaattg tataagcaca 2580 tggagatgag gttccccatt ttcgtgtagc tctctagcta cttttatgta ttttttattt 2640 gttggtgttt gtagcctttg aagttggtcg agagcttctt ctttggataa agaacaattg 2700 ggatatgtga ggaaatagtt cttggctgct atttgaaaac gtttgggatt ggatggcata 2760 tttgtaaata tgtgttggtt accaattggt ttgcttttta attctctaaa tgaatcggta 2820 actggtaccc aatttatagg ggagggcacc gtattaatat t 2861 //