ID X82547; SV 1; linear; genomic RNA; STD; VRL; 7383 BP. XX AC X82547; XX DT 03-OCT-1995 (Rel. 45, Created) DT 03-OCT-1995 (Rel. 45, Last updated, Version 3) XX DE Cherry capillovirus A RNA for ORF1 and ORF2 XX KW coat protein; movement protein; ORF1; ORF2; polyadenylation; RNA replicase. XX OS Cherry virus A OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; OC Capillovirus. XX RN [1] RX PUBMED; 7636482. RA Jelkmann W.; RT "Cherry capillovirus A: characterixation of a new plant virus by its RT nuceotide sequence and serological investigations"; RL J. Gen. Virol. 76:2015-2024(1995). XX RN [2] RP 1-7383 RA Jelkmann W.; RT ; RL Submitted (07-NOV-1994) to the INSDC. RL W. Jelkmann, Federal Biological Research Centre for Agricultural & RL Forestry, Inst. for Plant Protect. in Fruit Crops, Schwabenheimer Str. 101, RL 69221 Dossenheim, FRG XX DR MD5; c9a0dbffbcebc609e182e4f88582b15a. DR EuropePMC; PMC4866854; 27174277. DR EuropePMC; PMC4901221; 27284130. DR EuropePMC; PMC5636130; 29020049. DR EuropePMC; PMC6256570; 30533734. XX FH Key Location/Qualifiers FH FT source 1..7383 FT /organism="Cherry virus A" FT /mol_type="genomic RNA" FT /db_xref="taxon:42882" FT CDS 55..7083 FT /product="RNA replicase" FT /product="coat protein" FT /note="ORF1" FT /db_xref="GOA:Q65980" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008879" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q65980" FT /protein_id="CAA57896.1" FT /translation="MAFVAKFAEENYFNSLPSNVTDAFLRDGFNAEHNRFEILSRHFAF FT ALKPSQRTYLNDCGIQLAPIASKTHPHPVSKIIENHLLYCVVSNMISNFKFLVFLSIKE FT VKAEYIWNKNTADTVREISNRILDIKDAFRYGPTNTVNGGINNFSFFCANLNRRFNNRA FT IKPDCFFIHDEVHFWSPAELCEFLFTVEPKNVLATVVIPPELLEGLDYSFNSVAYDFKK FT VDGNLYYFPDKSKGKPYQQPMDPWLLKCNKISMIKNGEIFSYSIGLLESVGANHLFSFQ FT RNKVVESTRFFNDFDCLDMRKLLPINVENGKIKGYNIRTWVFKKILSYIVCLKKGDSES FT SLAKLRQLSDSSPSSDELLLIGDFFDLMTRVKIFNKRSPWSFLSDAKNYVDSWIIQSPF FT LRRIFPVGSRAITELIRDWIANAESLKIQTTCSSLTFSDSFEMIKTDSISEFGEHILGN FT ISGGLSSAIEACRNWLTSKRFSGGSYSMVSRNGLLVDSMRQNTSFSCEVFVDLFPSTIR FT PAFYSDPNFTKVESFEPEWDFLLGSWIFNHKQVRLCYEPSNSHADSEEDVNRTSETSSP FT EKTIADSSSVSPFVSSNHEEGTSSQQSEEKPISEQEKKETRKNDCFFKAVGETIGIPAN FT SLIERILCSDSEDLKPVIEQLNLDHPISSKLLEVCCKFLGYRVHIYYGDSIIKLNDDIN FT MHAIHIGGKPGHLFCINQERSKIPKDSQIKVPEVGPQSFIGSIFSKTYGSGSSAPIHLG FT QIDITKALVLVSAFESMNLGVRVDRKAILEGQLISNGFLAFLKRKNNEGHKVIKIQSLP FT VYPFIGFAGSGKSFGLTEKLINGDCSQNFMFTAPRKKIIGQIHERIDSRQYDDKLKISR FT KKNFSTFENTLLSLVNKPLVIMDECSLNPPGFIDLVLIKSLDSIIRKSNKDFDHFFSSS FT VLSEGIIANVASPIACIAVTGDTLQSSFYSESCGKLMQYKNDIKTLCALSHTRLPYLFG FT SKRFGYFTGFLKLGYYNQMESKAFTIDNMETLQKAIGTSMDKFGVLVTSRADKSDFELD FT FPNVCTINEAQGSTFNSVILIVTRDFFSNPIESIIVAITRHQKNLLIYFPAAIQGEMDF FT LSRRFPIHSNVVLKNFSVLDNLIKDKLNPFQLIQEDPFGHDFEVKLEGDPFLKSELSLV FT NEIKLQQIEENSIESKENLKTHLPISYSGLWNLEISEMRAREDREFKKFGVGWSKQFKD FT EPNQKDQVEDNCAMLPEAVFPRHFANDDLTFWSAVKKRLVFKNPLSNAHDFEKAKPFGK FT ELLNIFLRKVPLMPNFDQRMYDESVSEFEEKKISKNAAMIGAHHDRSTTDWPTNEIFLF FT IKSQLCTKKEKMFCDAKAGQTLACFSHLILCKFAPLNRYIEKKVTQSLPGNFYIHQKKN FT FDELERWVKSYNFSGVCTESDYKAYDASQDSCTLAFEYKLLRYLAFSNSLIEDYLYLKM FT HLNCKLGNLAIIRFTGEFCTFLFNTLTNMLFTFMKYDVRKTHAICFAGDDMCANVRLPE FT NHEYSSLLKKFSLKAKVDFTRSPTFCGWNLSRYGIVKKPELIAARLAVARQKGEVNLVL FT DSYFLEHLYAYNKGDHLFEILSEKELEHHYNLTRFFVKNSKLLKGESKKKFMETKEIEG FT GLFGECDFGNDSIFKDYINRVKNKVEIDLLNERILRINTEMNQFDPRIYMMNKIGFVTS FT TSMFEAGHIASNESNQVKSLPPQTSWPYDEVKPYMPLSLRNSYESRTKGNRLLSILRNQ FT KHLCDLGSGSILGLRVLEGLKMFKEECRSYQSRSFFKESQETNQEFSLMQFVPRTFTVM FT QMPSIPKCSQLLKDFSLQLLYLQAALAKAMLHSSIFLMKLSWRLSKKPLLSTQCFILGQ FT SSYVLHAFSSLKSRSMAELYTLIPGFWTKMMHAKQVLVSSCKLDQPITFIGQIIQCPHM FT IQTCIGLLESSLNSMQSMLLTIPTYSSLTLESCTSSVIRALQRRQLPQMLGHSFKHFLG FT LLDYQILNPFLRMKILSILQLWHSLTSVLTRVSGKVVSLKAHHVQQEPEGIMPEARDRV FT LSQSQKLLVKILNNKKEICLGQIHVGLKIFSSIQNRGFQLIKNSSTDLISAILKGGTQI FT SSMALSIVEQNYNEIRRGLGNYIWENMIDPRDLLHLTAKPAVEASEGVAATPAITLSEN FT QRAVKNTIRNYYLRIMFGNLAVMGTSEQTDYPGEHLAIPRPVIENQEALTAHLPAGMSL FT LTFATNVKAWGVVGAEGKFAGLTFRQLCEPFAEQAYNFFRENHGAVSFIYLKNPGAYFN FT CPAVVFDFNKGLPLTIIKIGKNANAISACNQRLFNREGKKAVFAAQGEVNLSFDA" FT CDS 5400..6791 FT /product="putative movement protein" FT /function="polyadenylation of RNA" FT /note="ORF2" FT /db_xref="GOA:Q65981" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q65981" FT /protein_id="CAA57897.1" FT /translation="MSIIPVKKFLQRVAGDESRIFIDAIRAKDIYSDANAFNSKVLTAV FT KRFQSSIAIPASCTGESNVTQFNIFDEVELEAIKKASSEYSMLHLGAIIICVTCFFKLK FT KPINGRIVYFDPRFLDKNDACQAGFSFQLQTGSAYYLYRPNYPMSTHDPNMHRAARIKF FT EFDAINVVDNSHLFFIDFGVMYQLSNQSTAEKTTAADVGAQFQALFGSSGLPNPESFLE FT DEDIVNPPTVALIDVSVDQSFRKGGFFKGPPRSTRARRYHARSKRQGFESIPKTVGKDP FT KQQERNLFRSNSCRSENFQFNPEQRFSVDQEFINRFDKCNSQRRDSNLQHGFEHSGAEL FT QRNKKGPWKLHLGEHDRSEGSITSDCETSGGGIRGSGCNTSDHIIREPEGCEKYNPKLL FT PEDNVWESCGDGYKRTDRLPRGTSSNPETSDRESGSSDCTSPSRHVIINFCHKCEGMGC FT GWCRR" XX SQ Sequence 7383 BP; 2274 A; 1378 C; 1528 G; 2203 T; 0 other; tcacttccat caatttccaa acactttcaa aactcccaaa cacaagcaag tgcaatggca 60 tttgtggcta aatttgctga agaaaactac ttcaactcac tccctagtaa tgtcactgac 120 gcatttctta gggatggatt caatgctgag cataaccgtt ttgagattct ctcaagacat 180 tttgcctttg cattaaaacc aagtcagaga acttatttga atgattgtgg cattcaacta 240 gcacctattg catccaagac acacccacac cctgtgtcta agattattga aaatcatctc 300 ctctattgtg tagtatcaaa tatgatttcc aacttcaagt ttctggtctt cttaagcatt 360 aaggaagtca aagctgaata catctggaac aaaaatacag ctgacacagt tagagagatt 420 tccaatcgca ttcttgatat caaggatgct ttccgctatg gtccaaccaa tacagtcaat 480 ggtggcataa acaactttag tttcttctgt gccaacctca atagaagatt caataacaga 540 gccatcaaac ctgactgttt ttttattcat gatgaggtgc atttttggag cccagctgaa 600 ctttgtgaat ttcttttcac tgttgagccc aaaaatgttt tagcaacagt tgtcattcca 660 ccagagctat tggaagggtt ggattacagc ttcaactcgg ttgcttatga cttcaagaag 720 gtggatggta acttgtatta ctttcctgac aaatccaaag gcaaacctta ccaacaaccc 780 atggatccat ggttgcttaa atgcaacaaa atttcaatga ttaagaatgg ggaaattttt 840 tcctactcta taggtcttct tgagtctgtt ggagccaatc atcttttctc cttccaaagg 900 aataaagttg ttgaatctac ccgtttcttc aatgactttg attgtctgga tatgagaaag 960 ttactgccca taaatgtgga gaatggaaaa atcaaggggt ataacatcag gacttgggtt 1020 ttcaagaaaa tcttgtccta tatagtttgt cttaagaagg gagactctga atcatccttg 1080 gccaagctga ggcagctgag tgattcctca ccaagctctg atgagcttct gttgattggt 1140 gacttctttg acttgatgac cagagtcaaa atttttaata aacgtagccc ttggagtttt 1200 ctaagtgatg ctaagaatta tgttgactct tggatcattc aatctccctt tcttcgaagg 1260 atttttccag taggcagtag ggccattact gaactcataa gagactggat tgccaatgct 1320 gaatctttga agattcaaac aacttgctct tctctcactt tctcagattc ttttgagatg 1380 ataaaaacag acagcatatc tgagtttggt gaacacatct tggggaacat ctctggtgga 1440 ttatcaagcg ccattgaagc ctgtagaaat tggttaacat caaagagatt ctctggtggg 1500 agttattcaa tggttagtag aaatggtctt ctcgtggact caatgcgcca gaatacttct 1560 ttctcttgtg aagtatttgt tgatcttttt ccttcaacca ttaggcctgc cttttactca 1620 gaccctaatt tcactaaagt ggaatccttt gagcctgaat gggatttctt acttgggtct 1680 tggattttca atcataagca ggttagattg tgttatgagc cgagtaattc acatgccgac 1740 agtgaggagg atgtcaatag aacttctgaa acttcaagcc ctgagaagac tattgcagat 1800 tcaagttcag tgtcaccttt tgtgagctct aatcacgagg agggaacatc atctcaacaa 1860 tctgaagaaa aaccaatatc tgagcaggag aaaaaggaga caaggaaaaa tgattgtttc 1920 tttaaagcag ttggtgaaac cattgggatt cctgccaatt cactaattga aagaatttta 1980 tgttcagatt cagaagacct caagccggtg attgaacaat tgaatttaga tcacccaata 2040 agttcaaagt tattggaggt ttgttgtaaa ttcctgggat acagagtgca tatttattat 2100 ggggatagca taataaaact caatgatgac atcaatatgc acgcaattca cattggaggg 2160 aagccaggtc atcttttttg catcaaccag gaaagatcca aaattccaaa ggatagccag 2220 atcaaagtcc ctgaagttgg acctcagtcc ttcattggat cgattttttc aaagacttac 2280 ggctcaggat caagtgctcc aattcatttg ggtcaaattg atatcacaaa ggctctggtc 2340 cttgtttcag cctttgagtc tatgaatctg ggggttcgtg ttgacaggaa agccatactt 2400 gagggccagc tcatatccaa tggtttcttg gcttttctta aaagaaagaa taatgagggg 2460 cataaggtca ttaaaattca atctcttcca gtttacccat tcattggctt tgctggctct 2520 ggtaaatcct ttggattaac tgagaagtta atcaatggtg attgcagtca gaatttcatg 2580 ttcaccgctc ccagaaagaa aatcataggg caaattcatg agagaattga ttcaaggcaa 2640 tatgatgaca agctaaaaat cagcaggaag aaaaatttta gtacttttga gaacactttg 2700 ctttcattag ttaacaaacc tctagtgatc atggatgaat gctccttgaa cccacctggc 2760 ttcattgatt tggttctcat caagtctttg gattctatca tccggaagag caataaggac 2820 tttgatcact tcttttcttc cagtgttttg tcagagggga taattgcgaa tgttgcttca 2880 cccattgctt gcatagcagt gacaggtgat acattacaat ccagttttta ctctgaaagc 2940 tgtggcaagc tgatgcaata caagaatgac atcaagactt tgtgtgcttt gagtcatacg 3000 agattgccct atctttttgg atccaaaagg tttggctact tcactggctt cctcaagctt 3060 ggatattaca atcaaatgga atcaaaggct ttcaccattg acaatatgga aactctacag 3120 aaagccattg gtacctccat ggacaaattc ggggttttag ttacctcaag agcagacaaa 3180 tcagattttg agctagattt tccaaatgtc tgcacaatca atgaagcaca aggaagcacc 3240 ttcaatagcg tcattttgat tgtgacaaga gatttcttct ccaatccaat tgagtcaatc 3300 atagtggcaa taacaagaca tcaaaaaaat cttttgattt attttcctgc tgctatacaa 3360 ggtgagatgg attttcttag cagaagattt ccaattcatt caaatgttgt gctgaagaac 3420 tttagtgttt tggacaactt gatcaaggat aaactgaatc cattccaatt aattcaagaa 3480 gatccatttg gtcatgattt tgaggttaag cttgaaggag atcctttctt gaagagtgaa 3540 ttgagtttgg ttaacgagat taaattgcaa cagattgaag aaaactcaat tgaatctaag 3600 gaaaatctca aaactcattt gccgatatct tacagcgggc tgtggaatct ggagatcagt 3660 gagatgaggg ctagagaaga tagagaattt aaaaaatttg gtgttggatg gagtaagcaa 3720 tttaaagatg agccaaatca gaaagatcag gtggaagata attgtgcgat gctccctgaa 3780 gctgttttcc cacggcactt tgccaatgat gatttaactt tctggagtgc agtcaaaaaa 3840 agattggtct tcaaaaaccc cttgagtaat gctcatgatt ttgaaaaggc caaacccttt 3900 ggcaaggagt tgttaaatat attcctgagg aaggtgccac tcatgcctaa ctttgatcag 3960 agaatgtatg acgagtctgt ctctgagttt gaggagaaga aaataagtaa aaatgcagcc 4020 atgataggag ctcatcatga caggtcaacc actgactggc caacaaacga aatcttcctc 4080 ttcattaaat ctcagctatg cacaaagaag gagaagatgt tttgcgacgc taaagctggt 4140 cagacccttg cttgcttttc tcatctcatt ctctgcaagt tcgctcctct caacaggtac 4200 atcgaaaaga aagtcactca aagccttcca ggaaatttct acatacatca gaagaaaaac 4260 tttgatgagc ttgaaagatg ggtgaaatca tataatttca gtggggtctg tacagagtca 4320 gattacaaag cttatgatgc ctcacaggat tcttgcactc tagccttcga gtataagctt 4380 ttaaggtacc ttgccttttc aaatagtttg attgaggatt atctttacct gaaaatgcat 4440 ttgaattgca aacttggaaa tcttgctata atccgtttca ctggagagtt ttgcaccttc 4500 ctattcaaca cattaactaa catgttgttc actttcatga agtatgatgt tagaaagact 4560 catgcgatat gcttcgcagg tgacgatatg tgtgctaatg taagattgcc agaaaatcat 4620 gaatactcaa gcttactgaa gaagttttcc ttgaaagcta aagtggactt cactcgctct 4680 ccaactttct gtggatggaa cctttcaagg tatggaatag tcaaaaagcc ggagttaatt 4740 gctgcaagat tagctgttgc caggcaaaaa ggggaagtta atctggtctt ggattcatac 4800 ttccttgagc atctctatgc gtacaataaa ggcgatcacc tttttgaaat cttgagtgaa 4860 aaggaactag aacaccatta caatctcacc agattctttg tgaagaatag taagctttta 4920 aaaggtgagt caaaaaaaaa attcatggaa accaaagaaa ttgaaggggg gttatttggg 4980 gagtgtgatt ttgggaatga tagtatcttc aaggattaca ttaatagagt gaaaaacaaa 5040 gttgaaattg atttattgaa tgagagaatt ttgaggataa acactgagat gaatcagttt 5100 gacccaagga tatacatgat gaataagata gggtttgtca ctagcacatc aatgtttgaa 5160 gcaggccaca ttgcatcaaa tgaatccaac caggtaaaaa gtctccctcc acaaacaagc 5220 tggccatacg atgaggtgaa accatacatg ccattgagtt tgaggaattc ttatgagtca 5280 aggacaaaag gcaataggct tctatctatt ctgagaaatc aaaaacattt atgtgattta 5340 ggatcaggct ctatcttagg tttaagagtt ttggagggct tgaaaatgtt caaggaggaa 5400 tgtcgatcat accagtcaag aagtttcttc aaagagtcgc aggagacgaa tcaagaattt 5460 tcattgatgc aattcgtgcc aaggacattt acagtgatgc aaatgccttc aattccaaag 5520 tgctcacagc tgttaaaaga tttcagtctt caattgctat acctgcaagc tgcactggcg 5580 aaagcaatgt tacacagttc aatatttttg atgaagttga gctggaggct atcaaaaaag 5640 cctcttctga gtactcaatg cttcatcttg gggcaatcat catatgtgtt acatgctttt 5700 tcaagcttaa aaagccgatc aatggcagaa ttgtatactt tgatcccagg tttttggaca 5760 aaaatgatgc atgccaagca ggttttagtt tccagctgca aactggatca gcctattacc 5820 tttataggcc aaattatcca atgtccacac atgatccaaa catgcatagg gctgctagaa 5880 tcaagtttga attcgatgca atcaatgttg ttgacaattc ccacttattc ttcattgact 5940 ttggagtcat gtaccagctc agtaatcaga gcactgcaga gaagacaact gccgcagatg 6000 ttggggcaca gtttcaagca ctttttgggt cttctggatt accaaatcct gaatcctttc 6060 ttgaggatga agatattgtc aatcctccaa ctgtggcact cattgacgtc agtgttgacc 6120 agagtttcag gaaaggtggt ttctttaaag gcccaccacg ttcaacaaga gccagaaggt 6180 atcatgccag aagcaagaga cagggttttg agtcaatccc aaaaactgtt ggtaaagatc 6240 ctaaacaaca agaaagaaat ttgtttaggt caaattcatg taggtctgaa aattttcagt 6300 tcaatccaga acagaggttt tcagttgatc aagaattcat caacagattt gataagtgca 6360 attctcaaag gagggactca aatctccagc atggctttga gcatagtgga gcagaattac 6420 aacgaaataa gaaggggcct tggaaattac atctgggaga acatgataga tccgagggat 6480 ctattacatc tgactgcgaa accagcggtg gaggcatcag agggagtggc tgcaacacca 6540 gcgatcacat tatcagagaa ccagagggct gtgaaaaata caatccgaaa ttattacctg 6600 aggataatgt ttgggaatct tgcggtgatg ggtacaagcg aacagacaga ctacccaggg 6660 gaacatctag caatcccgag accagtgata gagaatcagg aagctctgac tgcacatctc 6720 ccagcaggca tgtcattatt aacttttgcc acaaatgtga aggcatgggg tgtggttggt 6780 gcagaaggta aatttgctgg attaactttc aggcagttgt gtgaaccatt tgctgagcaa 6840 gcttataatt tctttaggga gaaccatgga gctgtctcat ttatttacct caagaatcca 6900 ggggcctact tcaattgccc agctgtcgtc tttgacttca acaaagggtt acctctgact 6960 attattaaaa ttggaaaaaa tgccaatgca atatctgcct gcaatcagag actgtttaat 7020 agagaaggga agaaagccgt cttcgccgca caaggcgaag taaacttgag ctttgatgct 7080 taagtttttg tttgttgctt aactgccaga gcaattaaaa gatgatggca taggtcttgg 7140 attatgtagt taaaaattcg aatccttcac cgtcaccaat caagggtgtg tacttggtca 7200 ctagagaagt agtgtatgtc ttctccaacc ttaagagagg ttagtttctc ttccctggtt 7260 taagtactgg gatttgcatc gtttgttcca aaggttcttt ggatgcatct tattttagaa 7320 cctttccgct ttaaagtgct atctaattgc accttgcttt aggacttttt attctttttc 7380 ctt 7383 //