Dbfetch
ID X81639; SV 1; linear; genomic RNA; STD; VRL; 3592 BP. XX AC X81639; XX DT 21-SEP-1994 (Rel. 41, Created) DT 29-AUG-1995 (Rel. 45, Last updated, Version 10) XX DE Soil-borne wheat mosaic virus genomic RNA2 XX KW 19 kDa protein; coat protein gene; RNA2. XX OS Soil-borne wheat mosaic virus OC Viruses; Riboviria; Virgaviridae; Furovirus. XX RN [1] RP 1-3592 RA MacFarlane S.A.; RT ; RL Submitted (14-SEP-1994) to the INSDC. RL S.A. Macfarlane, Scottish Crop Research Institute, Dept of Virology, RL Invergowrie, Dundee DD2 5DA, UK XX RN [2] RP 1-3592 RX DOI; 10.1006/viro.1995.1245. RX PUBMED; 7747472. RA Chen J., MacFarlane S., Wilson T.M.; RT "An analysis of spontaneous deletion sites in soil-borne wheat mosaic virus RT RNA2"; RL Virology 209(1):213-217(1995). XX DR MD5; f827ef11f98683ee06f74cad6f40f220. DR RFAM; RF01080; UPD-PKib. DR RFAM; RF01104; SBWMV2_UPD-PKb. DR RFAM; RF01105; SBWMV2_UPD-PKl. DR RFAM; RF01111; SBWMV2_UPD-PKk. XX FH Key Location/Qualifiers FH FT source 1..3592 FT /organism="Soil-borne wheat mosaic virus" FT /strain="Oklahoma" FT /isolate="OKl-1" FT /mol_type="genomic RNA" FT /note="RNA2" FT /db_xref="taxon:28375" FT CDS 334..864 FT /product="coat protein" FT /db_xref="GOA:Q787S9" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q787S9" FT /protein_id="CAA57294.1" FT /translation="MAVNKGYTGYNKELNAMAATHAYIRLSTLMSQIESWQATRASVLT FT HLGVMLNGVSKLGERSFFSRTKRFGAHTSDGDEIFCDLGGEAVTQILSRLTVALQSARG FT EGAQTRNAKRGAAPGTSQVENEEQGQTDQTLAISNAVAELMIFVRTKDFTMNECYTQDS FT FEAKYNLKWEGSS" FT misc_feature 865..2598 FT /note="coat protein readthrough" FT CDS 2665..3189 FT /product="19 KDa protein" FT /db_xref="InterPro:IPR007609" FT /db_xref="InterPro:IPR016567" FT /db_xref="UniProtKB/TrEMBL:Q86999" FT /protein_id="CAA57295.1" FT /translation="MSTVGFHTCASCVDGPKSIKCVSKYRISVYKTLGLDVVKCRLPAD FT CGVNCGMPAAFVLEQGHPKLTMDGYCGEKHRGYVLSGAWRHAQLRSLNAELDALEAREE FT SLRAQIKALSAGDHCPAVLAYVPKKLTKLKAEVHDVTGKKQVCITGLVDVMDSALVRLA FT PDSPPKKISSL" XX SQ Sequence 3592 BP; 898 A; 692 C; 930 G; 1072 T; 0 other; gtatttcttc ttcacatatg acaagtgtta acttgttccg tgagatttta ccattcttcc 60 ctgagtgaga attaaaataa actttggatt gctacttgga tgaaacttgg agtttcactt 120 gtctctcgtt accataggca cgctttaacg cgataaatcc taggtaatca gcggggagga 180 aactagtcgt ctctttcaag tggtatcggt gcgctggata agtttgctag actcaaagac 240 caggtggacc tgtcgctgca gaaagcagct ggtaaagtga ctgctgaatc taccggatca 300 ttattgccaa aggttactac acccttgcca gttatggcgg taaataaagg ttacactggt 360 tacaacaaag agcttaacgc gatggctgcg actcacgctt acataagact cagcactctg 420 atgagtcaga ttgaaagttg gcaggctacg agggcgagtg tacttacgca tttgggtgtt 480 atgcttaatg gcgtgagtaa attaggtgaa cgaagtttct tctctaggac taaacgcttt 540 ggagcacata cctcagacgg tgacgagatt ttctgcgatc tgggaggaga agcggttacg 600 caaatccttt ctaggttgac agttgctctt cagtccgcta gaggtgaagg cgctcagacg 660 aggaacgcca agaggggagc tgcacctggc actagtcaag tagagaatga agaacagggt 720 cagaccgatc agacccttgc tatttctaat gcagttgctg agttgatgat ctttgtgcgt 780 actaaagatt tcactatgaa tgaatgctat actcaagact cttttgaggc taagtataac 840 ttgaaatggg aaggttcgag ttgacgggac ggcgtctcgg gaaagttgag ggcacaaatc 900 gttgaagaat ttcagaatcg actcataatt gctgacgatt tgggcatctt tccgagacgc 960 gatgttgatg gtgttatcat tcgtaacgaa ccagaggtag tttattcgga gctagaagat 1020 aagttactga gctttgaaag ttctgtctat catcccaaag cagttactgt tgagtttgaa 1080 gttcctgttg ctacagggac tacgactact gatgatgaga tcacttctga agatgtggaa 1140 atggtaataa tcactgaggt gctcgtcgac gacgaatctg attactattg gctgtacttc 1200 gtactgctgc tcacatcttt tctcataacg tgtttcattc tcctttcgag gagattcatt 1260 catttccttg gcaaccgtgg gggtcctggt gcaccattgt gtagacgctt tgctacaaga 1320 ctttggtcca ttaggttgtg gttgttaagg aaagcgacca ggcgctacgg caatttaggc 1380 gtcgagcgaa agactcactc tcaaaccaca atgcgtaaat atttgaggga ttacaacttt 1440 caacttgagg agtgggaaac ggctattggt tgtactccca gagaggcgtt gatcgttgct 1500 gatcagcata ttctggttcg tgcggtgcag cgcattgttg attcagttgg tgatgtcgac 1560 agtgttgatg cggtaaggaa ggtctttaac ggctacaagg tcaggaattt caaaatagag 1620 aaatggttga gcaagcagac tgtgaattcc gctttggcag ttttgaacga ctcgactgtt 1680 cctgagagcg ttgttttaag tgaaggcatg ttgtctttac agacagccac ttttgaggaa 1740 gtgttgcgtt gtaacgttga gtcgcagaga gagagtgctt attttaatga gcttatcgct 1800 ttgcaattcg cgtttcgact tgcaggtacg ccagagtttt cggactttgt gcttgcttac 1860 aaaggtcctg cttatccttg ttacgttgaa gctataaatc gtcatggtac ttgtataatc 1920 cagcatcatg tcgatgaaga tcagaagcgg aagaacgaca gagcgattga gtggctactg 1980 atggccggtc aaggcgcctt tgtcgtttct tcagtcgtga ctacgggtgt tgtagtgttt 2040 aagatacaca aatggttgaa acaacgccta ctgcttagag cattgtcaat gttgccttct 2100 gttggtggtg gaggcaacgg tggtggaggt ggttctttgc cacctcaagc cctcgagctc 2160 tttgatagag ccggtacgtt tgaagaacgt cttgctgcct tacagagtgg tctggatttg 2220 agccctgaaa atatggaagt gtttactcct gaagagttga aaactgaaat acgacatgtt 2280 gttcaggcgt atgctgatag ttcttatcac gttgcagacg aaccgtacct tcgtggtgtt 2340 ggtgtcactg tggccactgg cttgccggag gctgttggag agatcactac cacgggtagt 2400 gaagtcagta gtgtggatac gtccatttct ttgggcgtac ctgggcgtgc acggaggcgc 2460 gcggtttcga aaaatacacg catgtatcct tcgactagtg ggcaatcata taatagttat 2520 aagtcaccta gggtaagtgg taaaagtggt gttggtagta tgaagacgaa aatcgctagt 2580 aagcctatgg cgtcctaacg tgttgttttt aatactactt caccaatcac acactacttc 2640 ctgggttact tgtttttctc cattatgtct actgttggtt tccacacttg tgcgagttgc 2700 gttgatggac ctaagtctat taaatgtgtt agtaagtatc gtattagcgt gtacaagact 2760 cttggtcttg atgttgttaa gtgtcgtctt cctgcagatt gtggcgttaa ttgtggtatg 2820 cctgcggctt ttgttttaga acagggtcat cctaagctta ctatggacgg ttactgtgga 2880 gagaaacaca gaggttatgt tctgtctggt gcgtggcgtc atgcccaact ccgctctctc 2940 aatgctgagt tagatgcttt ggaggctagg gaagagtctc ttcgagctca gattaaagct 3000 ctcagcgctg gcgatcattg tcccgctgtt ctcgcatatg tccctaagaa actgactaag 3060 ttgaaagcag aggttcacga tgttactgga aagaagcagg tgtgcattac gggtttagtt 3120 gatgtaatgg attctgcgtt ggtgcgtttg gcacctgact caccgccaaa gaagatatcc 3180 tctttgtgat gttctatgtt ctcgtctcgt tgttttcata ttgctagttt gtgtctactg 3240 gagtaggtaa ccaggataaa gaacccgaac gaaaatcttg caaaaatatt tattactaat 3300 ataaataaat gggcaagtct gtcactttgg ctatcagagt tatcatactc tataaactat 3360 gacgtggtct tcacgataga agatggtgct tgttatttca cctaaatcga aataacgaaa 3420 gggcgttcta cagtacgttt aaactgtagg ttccaacctc tagttcctat tgatgtaatt 3480 gaaaaaagat caatgggtaa ttatgatgag gtgcgactgg tggtcgcggc tgctatcaca 3540 cagcagctag gaggggttca attccccccc catccggagg gttatccggc cc 3592 //