ID   X80879; SV 1; linear; genomic DNA; STD; VRL; 1002 BP.
XX
AC   X80879;
XX
DT   31-JAN-1995 (Rel. 42, Created)
DT   31-MAR-2014 (Rel. 120, Last updated, Version 5)
XX
DE   Faba bean necrotic yellows C1 alphasatellite gene for replicase
XX
KW   replicase.
XX
OS   Faba bean necrotic yellows C1 alphasatellite
OC   Viruses; Alphasatellitidae; Nanoalphasatellitinae;
OC   unclassified Nanoalphasatellitinae.
XX
RN   [1]
RX   PUBMED; 7844570.
RA   Katul L., Maiss E., Vetten V.J.;
RT   "Sequence analysis of a faba bean necrotic yellows virus DNA component
RT   containing a putative replicase gene";
RL   J. Gen. Virol. 76:475-479(1995).
XX
RN   [2]
RP   1-1002
RA   Katul L.;
RT   ;
RL   Submitted (03-AUG-1994) to the INSDC.
RL   L. Katul, Biologische Bundesanstalt, fuer Land und Fortswirtschaft, Inst f
RL   Biochemie und Pflanz., Messeweg 11-12, 38104 Braunschweig, FRG
XX
DR   MD5; b62aaa98757744aec2454e9d1b296df8.
DR   EuropePMC; PMC113070; 10559333.
DR   EuropePMC; PMC2922188; 20678232.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1002
FT                   /organism="Faba bean necrotic yellows C1 alphasatellite"
FT                   /isolate="SSV 292-88"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1453080"
FT   repeat_region   79..109
FT                   /rpt_type=INVERTED
FT                   /note="potential stem loop structure"
FT   repeat_region   89..98
FT                   /rpt_type=INVERTED
FT                   /note="potential loop structure"
FT   regulatory      130..135
FT                   /regulatory_class="TATA_box"
FT   CDS             complement(157..354)
FT                   /gene="orf2"
FT                   /db_xref="UniProtKB/TrEMBL:Q66863"
FT                   /protein_id="CAA56848.1"
FT                   /translation="MRISPNYLLNSRESSFLLQLNYSLDMVMSSSFVLPDSVLNSLVER
FT                   EKRESSLEVACENPIRTSHI"
FT   CDS             163..999
FT                   /gene="orf1"
FT                   /db_xref="GOA:Q66862"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q66862"
FT                   /protein_id="CAA56847.1"
FT                   /translation="MACSNWVFTRNFQGALPLLSFDERVQYAVWQHERGTHDHIQGVIQ
FT                   LKKKARFSTVKEIIGGNPHVEKMKGTIEEASAYVQKEETRVAGPWSYGDLLKRGSHRRK
FT                   TMERYLEDPEEMQLKDPDTALRCNAKRLKEDFMKEKTKLQLRPWQKELHDLILTEPDDR
FT                   TIIWVYGPDGGEGKSMFAKELIKYGWFYTAGGKTQDILYMYAQDPERNIAFDVPRCSSE
FT                   MMNYQAMEMMKNRCFASTKYRSVDLCCNKNVHLVVFANVAYDPTKISEDRIVIINC"
FT   CDS             complement(716..949)
FT                   /gene="orf3"
FT                   /db_xref="UniProtKB/TrEMBL:Q66864"
FT                   /protein_id="CAA56849.1"
FT                   /translation="MPRWQKQLNEHFYYNKDLQIYISYLQSIYSSSSPSLDSSSFRMNI
FT                   WVHQMQYFSLDLEHTYTVCPGSFLRQCKTIHT"
FT   regulatory      910..915
FT                   /regulatory_class="polyA_signal_sequence"
XX
SQ   Sequence 1002 BP; 333 A; 164 C; 230 G; 275 T; 0 other;
     tgttttttaa acttagcgaa gcgggaaatt tcccgctctt ttgttcattt agcaaaacgt        60
     tgtcgttttc accttggacc aaggcgggta tagtattacc ccgccttgga acaccctcct       120
     tggaactggt ataaatagat ttatttaatt cataaattaa atatggcttg ttcgaattgg       180
     gttttcacac gcaacttcca aggagctctc cctcttctct cgttcgacga gagagttcaa       240
     tacgctgtct ggcaacacga aagaggaact catgaccata tccagggagt aattcaattg       300
     aagaagaaag ctcgattctc gactgttaag gagataattg ggggaaatcc tcatgtagag       360
     aaaatgaaag gtacaattga agaagcatca gcttatgttc agaaagaaga aacaagagtt       420
     gcaggtccct ggagttatgg tgacttattg aagagaggat ctcacaggag gaagacgatg       480
     gagagatatt tagaagaccc agaagaaatg caattgaagg atccagatac tgctcttcga       540
     tgtaacgcga agagattgaa agaagatttt atgaaagaaa aaacgaagct tcagcttcgt       600
     ccatggcaga aagagttaca cgatttaatt ctaactgaac cagatgatcg tactatcatc       660
     tgggtttatg gaccagatgg aggagaagga aaatcgatgt tcgcgaaaga attaatcaag       720
     tatggatggt tttacactgc cggaggaaag acccaggaca tactgtatat gtatgctcaa       780
     gatccagaga gaaatattgc atttgatgta cccagatgtt catccgaaat gatgaactat       840
     caagcgatgg agatgatgaa gaatagatgc tttgcaagta cgaaatatag atctgtagat       900
     ctttgttgta ataaaaatgt tcatttagtt gtttttgcca acgtggcata tgaccccaca       960
     aaaataagtg aggataggat tgtaattatc aattgttgaa tt                         1002
//