ID X80191; SV 1; linear; genomic RNA; STD; PHG; 3588 BP. XX AC X80191; XX DT 28-JUL-1994 (Rel. 40, Created) DT 21-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE Bacteriophage PP7 complete genome XX KW coat protein; complete genome; lysis protein; maturation protein; KW replicase. XX OS Pseudomonas phage PP7 OC Viruses; Riboviria; Leviviridae; unclassified Leviviridae. XX RN [1] RP 1-3588 RA Olsthoorn R.C.L.; RT ; RL Submitted (22-JUL-1994) to the INSDC. RL R.C.L. Olsthoorn, Leiden Inst. of Chemistry, Dept of Biochemistry, Gorlaeus RL Labs. Rijksuniversiteit Leiden, PO Box 9502, 2300 RA Leiden, NETHERLANDS XX RN [2] RP 1-3588 RX DOI; 10.1016/S0042-6822(95)80078-6. RX PUBMED; 7831817. RA Olsthoorn R.C.L., Garde G., Dayhuff T., Atkins J.F., Van Duin J.; RT "Nucleotide sequence of a single-stranded RNA phage from Pseudomonas RT aeruginosa: kinship to coliphages and conservation of regulatory RNA RT structures"; RL Virology 206(1):611-625(1995). XX DR MD5; 9c255d975617c95d9ba3bd1b9ebe7652. XX FH Key Location/Qualifiers FH FT source 1..3588 FT /organism="Pseudomonas phage PP7" FT /mol_type="genomic RNA" FT /db_xref="taxon:12023" FT CDS 80..1429 FT /transl_table=11 FT /product="maturation protein" FT /db_xref="GOA:Q38061" FT /db_xref="InterPro:IPR005563" FT /db_xref="UniProtKB/TrEMBL:Q38061" FT /protein_id="CAA56472.1" FT /translation="MLEEHYYSRKTCGSGGGLSVQRTGYPQTDPPVFKAVNSFERAPLI FT VGDHVHSLPYWSRKITLECTPYPFTLRWEGGVHKDGIPDKVPHPSCDPGSELVSYTHSR FT EVDCERFIGPVPSSFTDPKVTSAQWKFLEDMADMKALADLNKSLVNLPMLYKERRETLK FT MVGNRLGGLVRVAHAAQDRDLKRYFKARRKDRRKVAEEVANGHLELIFGWLPLIGELEG FT AIEYAELPDLDFIRCHGLHTLVLQSTPWDNSVDVRSYPNWERAAGTRITGSVRTRGVVE FT SRASVRTALRFNLETSLAGDARRLGFEPISTTYDMIPLSFVVGWFSNFDKYVRTLAPLI FT GVTFETGSQNRRTTCELVGCTRFYPRTVSPPSGWFARWKDFPDGSLSEVSGLRRTDIRS FT VLSTLPDPDVRFHADVGLFEISAGISLLAQRYLKPLQRLLKRKSFFYGRT" FT misc_difference 111..115 FT /note="conflict" FT /citation=[2] FT CDS 1429..1815 FT /transl_table=11 FT /product="coat protein" FT /db_xref="GOA:Q38062" FT /db_xref="InterPro:IPR015148" FT /db_xref="InterPro:IPR015954" FT /db_xref="PDB:1DWN" FT /db_xref="PDB:2QUD" FT /db_xref="PDB:2QUX" FT /db_xref="PDB:6N4V" FT /db_xref="UniProtKB/TrEMBL:Q38062" FT /protein_id="CAA56473.1" FT /translation="MSKTIVLSVGEATRTLTEIQSTADRQIFEEKVGPLVGRLRLTASL FT RQNGAKTAYRVNLKLDQADVVDCSTSVCGELPKVRYTQVWSHDVTIVANSTEASRKSLY FT DLTKSLVATSQVEDLVVNLVPLGR" FT CDS 1784..1951 FT /transl_table=11 FT /product="lysis protein" FT /note="ttg start" FT /db_xref="GOA:Q38063" FT /db_xref="UniProtKB/TrEMBL:Q38063" FT /protein_id="CAA56474.1" FT /translation="MSSTLCRWAVKALRCTRVYKEFIWKPLVALSYVTLYLLSSVFLSQ FT LSYPIGSWAV" FT CDS 1852..3510 FT /transl_table=11 FT /product="replicase" FT /db_xref="GOA:Q38064" FT /db_xref="InterPro:IPR005093" FT /db_xref="InterPro:IPR007096" FT /db_xref="UniProtKB/TrEMBL:Q38064" FT /protein_id="CAA56475.1" FT /translation="METLSSAQLRDVVSSELGLPVPTQLPHRELGGVEKSPEQFAKEYF FT LYNLLRKVEPFSRKEEVPDSVXRASLIAFANAEHNCRVMNQCGRYYSVVNEELELLFSE FT ASRLAKILISRWLSDFWPDWEEARFTGGASRLSSRKFSLPALKLAGFSERGQLSITAPA FT LPYYRLYREGITASDRGYTIVDDSRFDFVAKTAKAVRFIAMEPELNMLLQKSVGDTIRA FT ALRKAGIDLNTQRLNQDLAYHGSVFRNLGTIDLSSASDTLSIELVRQYLPKRFLRYVLD FT LRTPYTSVGGKKHRLEKVASMGNGFIFELQSLIYAAFAHAMTLVVGGRECDIAIYGDDI FT IVSECVVEPLMQFLEWHGFCPNLDKSYWGGDPFRESCGKHYFAGRDVTPVYVKGALDNL FT PALFRLFNSLKRWEEQTGIRIPDTIALVLSYIPKRDRVLVPKTYSITAGLHFPAKGCVF FT PRTIYVRRYQRLIRKGRYMTEEQVDISKRLDDEVRYVDWLRNPPEALLPLEVWRRFSHR FT ARHHGLPRERKRYRCVSSLEASSVWSSYEDWGEMA" XX SQ Sequence 3588 BP; 772 A; 962 C; 983 G; 870 T; 1 other; ggtctacggg cccatatggg cccgtgactg gtgggttgct ttcgcagctc gctattgagc 60 ccccgtagac gaggatagca tgctcgaaga acactattac agccggaaaa cgtgtggatc 120 tggaggcggt ctatcggttc aaagaaccgg ttacccgcaa actgaccccc ccgtttttaa 180 ggctgttaat agcttcgaac gtgctccctt gatcgtcggt gatcacgtac acagcttgcc 240 gtactggtct cggaagataa cgctcgagtg tactccgtac cccttcacac ttcggtggga 300 gggcggagtt cacaaggacg gtattcccga taaggtaccg catccctctt gcgaccctgg 360 gagtgagctt gtctcatata cccattcgcg tgaggttgac tgtgaacggt ttatcggccc 420 cgtcccaagt tctttcactg atccgaaggt aacttcggca caatggaagt tcttggagga 480 catggctgat atgaaggcgc ttgccgacct gaataagagt ctggtgaacc tccctatgct 540 ttataaggag agacgcgaga cccttaagat ggtcggtaat cgccttggtg gtcttgttcg 600 cgtggctcac gctgcgcaag accgcgacct caaacgatac tttaaagcgc gccgtaagga 660 tcgccgaaag gtagcggagg aggtggccaa cgggcatctc gagctcatct tcgggtggtt 720 accactcatt ggagagcttg agggggcaat tgagtatgct gaattgcccg acctcgactt 780 catacggtgt cacggtctgc atacccttgt gctgcagagt actccctggg ataactccgt 840 agatgtacgg agctacccta attgggagag agctgctggc acgcggatta caggttccgt 900 tcgcactcgt ggtgtggtcg agtcccgtgc aagtgttcga acagcgcttc gtttcaatct 960 tgaaacatcg ctggctgggg acgcccgtcg tctcgggttc gaacccatct ctacgacgta 1020 cgatatgatt cctttatcgt tcgtcgtcgg gtggttctcg aacttcgata aatacgtgcg 1080 tactctagca ccgctaatcg gcgttacctt tgaaacaggt agccaaaacc ggcgaacaac 1140 ttgcgagctt gttggctgta cacggttcta tcccagaacc gtgtcgcccc cgagcggatg 1200 gttcgcgcgt tggaaagact ttcccgatgg aagtctctcc gaagtctcag gacttcggcg 1260 tactgacatc aggtctgtcc tctcgacgct cccggatccc gacgttcggt tccatgctga 1320 cgttggtctc tttgagatca gcgcggggat tagtctcctc gcacagcgtt atctcaaacc 1380 gttacagcga ctactgaaac gtaagtcgtt cttttatggg aggacataat gtccaaaacc 1440 atcgttcttt cggtcggcga ggctactcgc actctgactg agatccagtc caccgcagac 1500 cgtcagatct tcgaagagaa ggtcgggcct ctggtgggtc ggctgcgcct cacggcttcg 1560 ctccgtcaaa acggagccaa gaccgcgtat cgagtcaacc taaaactgga tcaggcggac 1620 gtcgttgatt gctccaccag cgtctgcggc gagcttccga aagtgcgcta cactcaggta 1680 tggtcgcacg acgtgacaat cgttgcgaat agcaccgagg cctcgcgcaa atcgttgtac 1740 gatttgacca agtccctcgt cgcgacctcg caggtcgaag atcttgtcgt caaccttgtg 1800 ccgctgggcc gttaaggccc tgcggtgtac ccgtgtgtat aaggagttta tatggaaacc 1860 cttagtagcg ctcagttacg tgacgttgta tcttctgagc tcggtcttcc tgtcccaact 1920 cagctacccc atcgggagct gggcggtgta gagaagtctc cagagcagtt cgcaaaagag 1980 tactttttgt acaacctttt gcggaaggta gaaccgttct ctcgtaaaga ggaggttcct 2040 gattcggtcd tgcgcgcaag ccttatagct ttcgcgaacg ccgaacacaa ctgtcgcgtt 2100 atgaaccaat gtggccgtta ttattcggtg gtcaacgagg aactggaact tcttttttca 2160 gaggcatccc gcctcgcgaa gatccttatt tctcgttggc tttccgactt ttggccagat 2220 tgggaggaag cacgcttcac aggtggtgct agccgcctat cctcaaggaa attctcgctc 2280 ccagctttaa agctggcggg attctccgag agagggcaac tgagcataac ggcaccagct 2340 ctcccctact accggcttta tcgcgaaggt attactgcga gtgatcgcgg atacacaatc 2400 gtcgatgaca gccggttcga ttttgtcgct aagaccgcga aggcggttcg cttcatcgct 2460 atggagccag aacttaacat gctgctgcag aaatctgtag gagacacgat aagggctgct 2520 ctgcggaaag cgggtatcga tctcaatacc cagcgactaa atcaagatct tgcgtaccac 2580 ggatccgttt ttcggaatct cggtacgata gatctgtcta gcgcttccga tacgttaagc 2640 attgaactcg tgcggcagta cctgccgaag cggtttctcc gctatgtatt ggatctccga 2700 accccctaca cgagtgtagg tggtaagaag cacaggctcg agaaggtcgc ttcgatgggc 2760 aacgggttca tttttgaact ccagagcctc atctacgcag ccttcgcgca tgccatgacg 2820 ctagtagtag gaggaagaga atgcgacata gccatttacg gcgatgatat catcgtcagt 2880 gaatgcgtag tagagcctct gatgcagttc ctcgaatggc atgggttctg ccccaatctc 2940 gataagagtt attggggagg ggatccattc cgcgagtcct gcgggaagca ctacttcgct 3000 ggtcgcgacg ttacccctgt ctacgtgaag ggggccctgg ataacctacc tgcccttttc 3060 cgtctcttca actcgttgaa gcgatgggag gagcaaacag gtatccggat ccctgacacg 3120 attgccttgg tactatcata cataccaaag cgggacagag tacttgtccc taagacatat 3180 agcattactg ccggcttaca cttccctgcg aaggggtgtg tcttcccgcg taccatttac 3240 gtccgtcgtt accaacgact aatacgtaaa gggcgctata tgactgagga gcaagtagat 3300 atctccaaga ggctggatga cgaagttcga tacgtcgact ggctccggaa ccccccagag 3360 gcgttattgc ccctggaggt ctggaggcgg ttctcgcacc gtgctcgtca ccatggcctc 3420 cctcgtgaga ggaagagata tcgttgcgtg agctcgctcg aggcgagctc ggtgtggtcc 3480 tcttacgagg actggggcga aatggcctag accatgcccc ttggcaaacc cattcgaccg 3540 ggtttgggtc ttctgacctc gtagtccgcg ctcagcggac ttcgacca 3588 //