ID X78455; SV 1; linear; genomic RNA; STD; VRL; 3374 BP. XX AC X78455; XX DT 29-MAR-1994 (Rel. 39, Created) DT 30-AUG-1995 (Rel. 45, Last updated, Version 10) XX DE Pea early browning virus (isolate TPA56) RNA2 complete sequence, encoding DE coat protein, 9kDa protein, 29kDa protein and 23kDa protein XX KW 23 kDa protein; 29kDa protein; 9kDA protein; coat protein. XX OS Pea early-browning virus OC Viruses; Riboviria; Virgaviridae; Tobravirus. XX RN [1] RX PUBMED; 7730817. RA MacFarlane S.A., Brown D.J.F.; RT "Sequence comparison of RNA2 of nematode-transmissible and RT nematode-non-transmissible isolates of pea early-browning virus suggests RT that the gene encoding the 29 kDa protein may be involved in nematode RT transmission"; RL J. Gen. Virol. 76:1299-1304(1995). XX RN [2] RP 1-3374 RA MacFarlane S.A.; RT ; RL Submitted (25-MAR-1994) to the INSDC. RL S.A. Macfarlane, Scottish Crop Research Institute, Dept of Virology, SCRI RL Invergowrie, Dundee, DD2 5DA, Scotland, UK XX RN [3] RP 1-3374 RX DOI; 10.1093/nar/18.15.4507. RX PUBMED; 2388830. RA Goulden M.G., Lomonossoff G.P., Davies J.W., Wood K.R.; RT "The complete nucleotide sequence of PEBV RNA2 reveals the presence of a RT novel open reading frame and provides insights into the structure of RT tobraviral subgenomic promoters"; RL Nucleic Acids Res. 18(15):4507-4512(1990). XX DR MD5; 5c0f12b6dc45db7b17376719adb41125. DR RFAM; RF01101; TLS-PK6. XX FH Key Location/Qualifiers FH FT source 1..3374 FT /organism="Pea early-browning virus" FT /mol_type="genomic RNA" FT /note="RNA2 complete sequence" FT /db_xref="taxon:12294" FT CDS 510..1148 FT /product="coat protein" FT /db_xref="GOA:Q84698" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q84698" FT /protein_id="CAA55212.1" FT /translation="MVKGKYEGFSASGAKDLVFSAWVEVGNWNEVLRRLMDLKFALQAD FT RDKIPGILSDLNMESPFTRFKRFSDGEEYALLIKEANIAIAQIQAASAFKRRADEKNAV FT SGLLTQSAQQPTSSIQGSSQATVVRPPRESDSAFAEDNFSFGKFDDASTAFHKARSYLR FT GLRLVALDQEDFEEKFKLVWKETPQQQQNVTGPTVPATSSGGGKGPGVA" FT CDS 1194..1433 FT /product="9K protein" FT /db_xref="UniProtKB/TrEMBL:Q84699" FT /protein_id="CAA55213.1" FT /translation="MESGVATRNLSYDKFGSSKIVGWQNHIAGGLVKVVIEFPNLHLIQ FT YENGVEKKLHTRKLTKFEWTLIGGALYTVDYSWY" FT CDS 1469..2236 FT /product="29K protein" FT /db_xref="GOA:Q84700" FT /db_xref="InterPro:IPR007935" FT /db_xref="UniProtKB/TrEMBL:Q84700" FT /protein_id="CAA55214.1" FT /translation="MTNWATLWPNDRLFLSDTYQLIWFDIEADRIEHKHFKAQNSEDIS FT MIPKGFVSFVDNRLPMCINHKGEVYIRVGSFDTAYYQKFGDLDVGDFDDQVLPPDRDFT FT FNKVVFGDVPQEQLDNQIRDLQSEVSILTSRNVEMNVRENDLLKKVSELEKQIRQSSHN FT YEKVVEDGVVLSYGKAGGLLNRMVVLNRRLVGQRFVTNQRRWENIIMGSGVHDGSSYMA FT FNFKESGGSLKVTFDFDKLQNLSPDDLLAMQIA" FT CDS 2268..2894 FT /product="23K protein" FT /db_xref="UniProtKB/Swiss-Prot:P16281" FT /protein_id="CAA55215.1" FT /translation="MSFNFTKDFLYSGKVYGLFYKGISVGRLEFNGGSVKITSGYIAIF FT PNYAPTEAKSGNILLTNVAKGSIRYSYNGADCAGWFIHSVEVAEISKLARPLLDAICYR FT HVYVGKPGIVANYFVDGDTSKCVVRSIEPFTLVCDPRDVTAGQVLEKNLSTMTVVSVAN FT KVKFNPKGNLTLYIFNTTLRGNDLFDSAHHSVWDCKGGEFYRQSQ" XX SQ Sequence 3374 BP; 953 A; 553 C; 820 G; 1048 T; 0 other; ataaaatttg tgaagcttgg ggggaccccc ttgctgaact acatgatgtg tgatagatga 60 ctttgagctt aactacatca tgacttatcc cttagttgag aggtttttct caaccgtaac 120 aaaatcctgg atttagttgg tcgctagaag actgaaagga tggagttgcg tttttaggta 180 gaagtataag tgtcttctca tacacataaa acctgagacg ttgggagtac gaaaactctt 240 ttacaaaaag aattgtgagg cattgctctt ttgtgcacac aaggttaaaa acgctgtagt 300 aatacatgcg caagaacagg ctgagcatct tgttctgggg tttcacacta tctttagaga 360 aagtgttaag ttaattaagt tatcttaatt aagagcataa ttatactgat ttgtctctcg 420 ttgatagagt ctatcattct gttactaaaa atttgacaac tcggtttgct gacctactgg 480 ttactgtatc acttacccga gttaacgaga tggtgaaagg aaagtacgaa gggttttcgg 540 cgtctggtgc taaggattta gtttttagtg cttgggtcga agtgggaaat tggaatgagg 600 ttctgagaag gttgatggat ctcaagttcg ctctgcaagc ggaccgtgac aaaattcctg 660 gtattctgtc agatttgaat atggagagcc cgtttaccag gttcaagagg ttttctgatg 720 gagaagagta cgctctgctg attaaagaag caaacatcgc aattgcacaa attcaagcgg 780 cttccgcttt taaaagacgt gctgacgaaa agaatgctgt tagtggttta ctcacgcagt 840 ccgcacagca gcctacttcc tcgattcaag gtagttcgca agctactgtg gttagaccgc 900 ccagagagtc ggattcggct tttgccgaag acaatttctc ttttgggaaa ttcgacgacg 960 ctagcacagc gttccataag gctcgttctt atttgagagg tctgcgatta gttgccttag 1020 atcaggaaga ttttgaagaa aaattcaagt tggtatggaa agagactccc cagcagcagc 1080 aaaatgttac tggacccact gttcccgcta cctctagtgg aggaggtaag gggcctggtg 1140 tggcatgaat tattactgtg ccctccacta acctttccaa atgtattaaa gacatggaga 1200 gtggagtggc taccagaaat ttgtcttatg acaaatttgg aagtagtaag attgttggtt 1260 ggcagaatca cattgctggt ggtttagtga aagtcgtaat tgagtttcca aacttacatt 1320 tgatacagta cgaaaatggt gtggaaaaga agttgcatac aagaaagtta acaaaattcg 1380 aatggaccct aataggaggt gccctttata ctgtcgacta cagttggtat tagaattgtt 1440 cttagaatag ttctaagaca agcataagat gacgaactgg gcgacattgt ggcctaatga 1500 tcggctgttt ctgtccgaca catatcagtt gatatggttt gatatagaag ctgataggat 1560 cgagcacaag catttcaagg ctcagaattc tgaagatatt agtatgatac cgaaagggtt 1620 cgtcagcttt gttgacaatc gtttacctat gtgtattaac cacaaaggcg aggtatatat 1680 acgagtaggt tcttttgaca cagcatacta ccagaagttc ggagatctgg atgttggtga 1740 tttcgatgat caagttctac cacctgatag agacttcacg tttaataaag tcgtttttgg 1800 ggacgtgcca caagaacagt tggacaatca gattagagat cttcagagtg aagtttctat 1860 tctaacaagc cgcaacgttg agatgaacgt ccgagagaat gatttgttaa aaaaggtctc 1920 tgagctggag aaacagatta gacaatcttc acataactat gagaaagtcg ttgaagatgg 1980 tgtggtgctg agttatggga aggcaggggg tttactcaac agaatggtgg tgctaaatcg 2040 aagacttgtc ggtcaaaggt ttgttaccaa ccaaagaaga tgggaaaaca ttatcatggg 2100 cagtggagta catgatggtt cgtcttacat ggcattcaat tttaaagaaa gtggtggttc 2160 tttgaaggtt acttttgatt ttgacaaatt gcagaatctg tcgcctgatg acttattggc 2220 gatgcaaatt gcataaagtt tagagggtgt tcatttaact gtttgtaatg tcttttaatt 2280 tcaccaaaga ttttctgtat tccggtaagg tttacggtct cttttataaa ggtatcagcg 2340 ttggtaggtt ggaattcaat ggcggttctg taaaaatcac ctcgggttat attgcaattt 2400 ttccgaatta cgctccgact gaagcgaaat ctggaaacat tttactaact aatgttgcca 2460 aagggagcat tcgctactct tacaacggag ctgattgtgc tggttggttt atccattctg 2520 tggaagtggc tgagataagt aagttggcac gtcctttact ggacgcgatc tgttaccgac 2580 atgtgtatgt aggaaaacct ggtatagttg cgaactactt cgtggatgga gataccagca 2640 agtgcgttgt tcggtcaatt gaacctttta ctttggtctg cgatccacgc gacgtgactg 2700 ctggtcaagt cttggagaaa aatttatcga ctatgactgt ggtaagtgtg gccaacaaag 2760 ttaagtttaa tccgaaagga aacttgacat tgtacatttt taataccacg ttgagaggga 2820 acgatctttt cgattctgct catcattcgg tatgggactg taaaggtggc gaattctata 2880 gacaaagtca ataagaagac tgtacttgtg gtcgttcttt tagttgataa gagaagaata 2940 cctactgagt agttttctac ctcaaaacct ggaacttcca gttagtagag atgggaatga 3000 aaattgattg ggttctttct ctgttcttct aaatatcgtt tttattgtta ttttaatttt 3060 agaagtgtgt agtgatgttt gcccgtagtg gggcatccgt tgcaattatt gtgtcgtgta 3120 aacgacattt gtgttatgct atttgtttgt gtatgagcta ggtattggtt aattccatgc 3180 ttaagtggtt ctaccatagg aacgatagtt tgttgttatt attatttgaa gtttgattta 3240 tgaaaatctt ctgctttctg aaaaggtcgt tgaccaagag aaagtgggag ggtgagtaag 3300 tactcttgaa gtggtgatgg ttacaaggca tagaagggtt aaacccttcc gcctacgtaa 3360 gcgttattac gccc 3374 //