ID X77466; SV 1; linear; genomic RNA; STD; VRL; 3824 BP. XX AC X77466; XX DT 13-APR-1994 (Rel. 39, Created) DT 11-JAN-1995 (Rel. 42, Last updated, Version 10) XX DE Strawberry latent ringspot virus genomic RNA-2. XX KW coat protein; RNA2. XX OS Strawberry latent ringspot virus OC Viruses; Riboviria; Picornavirales; Secoviridae. XX RN [1] RX PUBMED; 8077958. RA Kreiah S., Strunk G., Cooper J.I.; RT "Sequence analysis and location of capsid proteins within RNA-2 of RT strawberry latent ringspot virus"; RL J. Gen. Virol. 75:2527-2532(1994). XX RN [2] RC revised by [3] MAT RA Kreiah S.; RT ; RL Submitted (01-FEB-1994) to the INSDC. RL S. Kreiah, NERC, Inst of Virology & Environmental Microbiology, Mansfield RL Road, Oxford, OX1 3SR, UK XX RN [3] RP 1-3824 RA Kreiah S.; RT ; RL Submitted (19-OCT-1994) to the INSDC. RL S. Kreiah, NERC, Inst of Virology & Environmental Microbiology, Mansfield RL Road, Oxford, OX1 3SR, UK XX DR MD5; 835a868c7fc89828f9d223eba25aa3ba. XX FH Key Location/Qualifiers FH FT source 1..3824 FT /organism="Strawberry latent ringspot virus" FT /isolate="Hampshire H" FT /mol_type="genomic RNA" FT /db_xref="taxon:28351" FT CDS 670..3342 FT /product="98.8kD polyprotein" FT /db_xref="GOA:Q88171" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q88171" FT /protein_id="CAA54615.1" FT /translation="MESKRLKKTKDTDEEEPKYALMFVLSTWSHVPSFWSSNQIAGVVL FT LDGNRATQETAVLGIGVLPLYEAHSHALFAPRLISTMMIEFCDRLQLLTTFSDVVLGGG FT SPAMSYSTISVVRHNVRDAHFLPEPLPYSKSKEKTSGVKGLSNFQAAEIAPLQPARLTR FT SASYMPIQRSGEKTVLTFEDNQASLREQQPFEARASFSFSGVSYGQQDRAALPSAPSPK FT CAFHNRVGCPCKQHTGEAEASGLHEELVPASSGGTEAIFFSPKSIPLPGSAKFVGSHPF FT SFPINSNVGTTVYTLPLIRTSLKDTEWGRYYRSYTFMRFKPTVRLVSSAPIQAKGLLWL FT CYDPCETLAKYPSRERALMLQGTWFMPGRHDSVTLTIDELATPSGYSIMTSDHNGAFKV FT VIIKDLENFEVADLGMELSLFLDVQDIGMGMGPEMPLTDSFLPLRQVVVDFDLSTTTPK FT GKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNLPAMGGGTVEMGF FT ANDSYSGWESDAYRYFGSTVVDLRAHRLLRAKVPLHGYGGYLMGGSGSLFAVPPLTDYG FT QSLRFVLLFTAPLHISDTTKTGSVMVRYLGLEDCEYIQPTTSLGRLNPATTLVASGAPV FT VQVGTSDWVEPLLFRLPLGLLQKRFRLLTISKWPKSGFLFFPTTPSSHIPKLAGTFEGE FT VEQHSPLMHRSQENAQWSGSLTYYLSIRYSGATPQGVLPLRPVCLGATILDNIMGKPCF FT IEKDTFVQVMPMADPRETIYLPTTDSIASYETPPRRWVNTHFGATETYGVRTCPAWVLL FT QFPNEEASHLGVRDISLWVEPISHSVMLLEVFQLETKFQLPLLIITMRIPSQWDRLFSY FT SLFLGISQGEYPWPRMGFY" FT mat_peptide 1399..2562 FT /product="large coat protein" FT mat_peptide 2563..3339 FT /product="small coat protein" XX SQ Sequence 3824 BP; 836 A; 919 C; 864 G; 1205 T; 0 other; ttgaaaagca acctcgcact ttgttactaa atatttcatc ccagctgttc tgtattttga 60 tacagtgccc tttcgcacct cgctagccgc tgggcctatc cagtttgttc cgttactttg 120 tgcttccgtg ctcgctttaa tttttccctt agaccacgca accgcaacca cgtttactct 180 aagcaccaac gcttccccga tttgtcaagt taggggtttt tgcttttctc tccatttcac 240 acagcaatcc tttgctctgt ttcttttcct cctccttgca ctttatttgc tgcttccgcc 300 tcttctttca gagatggctt cttttttctc agcccgctct actgctgaaa tgccttcagt 360 tccttcctat tctccacgcg agatggaggt gctgaagtct gcgacgactg aatgcggcat 420 taactatgct gatgtggtta gggctgccga aactgagagt ggcaaacttg ctattcttac 480 tgctgcaaac accaactccc tcaagagctt ggtggctact accacaacac agagtgcttt 540 tcgccgcctc tctgcgtccc cgaagctatt gttcatgttt cggagggcgt tggaaaacaa 600 gttctttgtg atgacaagct cactcaccag accactgttg tccatacccc aaagaaggtt 660 tatgaccata tggaatccaa aagactcaag aaaactaagg atactgatga ggaggaaccc 720 aagtacgctc tgatgtttgt actatcaact tggagtcacg tcccatcttt ctggtcatct 780 aaccagatag ctggagttgt acttttggat gggaataggg caactcagga aacagctgtg 840 cttggtattg gggttttacc tttatatgag gctcactctc acgctctctt tgccccccgt 900 ttgatatcca ctatgatgat cgaattttgt gatagacttc agttgctcac taccttttct 960 gatgttgttc ttggaggtgg ttctcccgcc atgtcttaca gcactatctc agttgttagg 1020 cataatgtac gagacgctca ttttcttcct gagccactcc cctattctaa gtcgaaggag 1080 aagacctcag gggttaaagg attaagcaat ttccaagctg cagagattgc tcctctccag 1140 cctgctagac tgacgaggag tgcctcctac atgcccattc aacggtcagg ggaaaaaaca 1200 gtacttactt ttgaggacaa tcaggcctcc ttgagggagc aacagccttt cgaagcacgt 1260 gcctcttttt cgttctctgg agtttcttat ggacaacagg accgtgctgc actcccctct 1320 gcaccttctc caaagtgtgc ctttcataac cgtgttgggt gtccatgcaa gcagcacact 1380 ggcgaggcag aagctagtgg gcttcacgaa gagctggttc ctgcatcctc cggggggaca 1440 gaggcgattt tcttctcgcc aaagagtatt ccccttccag gtagtgccaa atttgttggc 1500 tcgcaccctt tctcttttcc aattaatagc aatgtgggca ccactgttta cacacttccc 1560 ctgataagaa cctctctcaa ggacactgaa tggggaagat attacagaag ttacaccttc 1620 atgcgcttta agccgacagt ccggttggtc tcttcagctc ctattcaggc caaagggctt 1680 ttgtggcttt gttatgatcc ttgcgagact cttgctaaat atcctagcag ggaaagggct 1740 cttatgcttc aagggacctg gtttatgcct ggtaggcatg attcagtgac gctcacaatt 1800 gatgaactgg caacgccatc tggttattct ataatgacca gtgatcataa tggtgccttt 1860 aaggttgtta ttataaagga ccttgagaac tttgaagttg ctgatcttgg gatggagctt 1920 tctctattcc tggatgttca agatattggt atggggatgg gccctgagat gcctcttacg 1980 gatagtttct tgccacttcg tcaggtggtt gtggattttg atttatccac aacaacccca 2040 aaaggcaagg ctctcgtcgt gcccctcaat cctcttcttc cgggttttga tggagcccaa 2100 tggtacccaa gctgctcttc ctccatatta gagaatcacc gttactggaa gggcactctt 2160 gtgctggagg taatcttcaa tcttccagct atgggtgggg gtactgtaga gatgggcttt 2220 gctaatgact cctactctgg ttgggagagt gatgcctatc gatactttgg ttctacagtg 2280 gtggatttac gagctcaccg attgttacgt gccaaggttc ctctccatgg ctacggaggt 2340 tatcttatgg gtggcagtgg ttccttgttt gctgttcccc cactcactga ttatgggcag 2400 tccttaagat ttgtccttct ctttactgcc ccactgcaca ttagtgatac cacaaagacg 2460 ggatcagtga tggtccgcta ccttgggcta gaagactgtg agtacataca accaaccacc 2520 tctttgggta ggcttaatcc ggcaactact ttagttgctt caggggctcc tgtagttcaa 2580 gttggaactt ctgattgggt agaaccactt cttttccgct tgcccttggg cttgttacaa 2640 aaacgatttc gtttacttac gatttcgaag tggcccaaga gtggtttcct cttcttccca 2700 actacaccca gctcacatat tccaaagttg gctggtacat tcgaaggaga ggtagagcaa 2760 cacagtccac tgatgcacag gagtcaggag aacgcacaat ggagtggttc acttacttat 2820 tatctttcca ttcgttattc cggtgcaaca cctcagggag ttttaccctt gaggcctgtg 2880 tgtctggggg ctactatctt agataacata atggggaagc catgctttat tgagaaggac 2940 acctttgttc aagtcatgcc aatggctgat cctcgtgaga ccatttatct tcctacaact 3000 gatagtatag cttcatatga aacgccaccc agacgttggg ttaataccca ttttggggcg 3060 acggaaacat atggtgttcg tacttgccca gcttgggttt tgcttcagtt tccgaatgag 3120 gaagcctctc atttgggggt tcgggacatt tccttgtggg tggaaccaat atcacattcc 3180 gtcatgctgt tggaggtttt ccaacttgaa accaagttcc agctccctct attgattatt 3240 actatgagaa taccttccca gtgggatagg ttgttttcct attctctttt cttaggtatt 3300 tctcaaggag aatatccctg gcccaggatg ggcttttact aggcaagccg gtgaactttg 3360 tgtgtcacta ccatggaact acatggttta gggtctttaa ttagtccctt ggttactttt 3420 acctcctcat tgtccatgtg ttgaggctgg cctttattgg ttggattctt ggacccccct 3480 cggttattag gtaagctgtg agtaagcagc cgctagcgtt ctggatttcc aggcacagtg 3540 agaatcagtg gcagattaac gacgccacac gcttgtagac cgtacgatag tctactttta 3600 tacgcttttg tagtttaggg ccatttgatg ttatctcttt attgagttgt acgtcatctg 3660 ttatgccact ctgcttttgt gtgttttctt gagcctttta tgtctccttt cattaggtgt 3720 acgtaattgt tgtgctcttt gctttctttt gtgtttaata aaggattaac caggcatcct 3780 cctaggttca accgggttta gttctggcac ttagaaaaag cttt 3824 //