ID X77156; SV 1; linear; genomic RNA; STD; VRL; 3107 BP. XX AC X77156; XX DT 25-JAN-1994 (Rel. 38, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Flock House Virus genomic RNA for protein A, protein B1 and protein B2 XX KW protein A; protein B; subgenomic RNA. XX OS Flock House virus OC Viruses; Riboviria; Nodaviridae; Alphanodavirus. XX RN [1] RA Dasgupta R.; RT "Near identity in the polymerase gene of two serologically distinct RT nodaviruses"; RL Unpublished. XX RN [2] RP 1-3107 RA Dasgupta R.; RT ; RL Submitted (17-JAN-1994) to the INSDC. RL R. Dasgupta, Institute for Molecular Virology, University of RL Wisconsin-Madison, 1525, Linden Drive, Madison WI 53706, USA XX DR MD5; fe5ba8e7172f708498eff752c0076c86. DR EuropePMC; PMC110865; 10799587. DR EuropePMC; PMC136111; 11907230. DR EuropePMC; PMC2604946; 19047642. DR EuropePMC; PMC3165748; 21734038. DR EuropePMC; PMC4117760; 24939903. DR EuropePMC; PMC5799278; 29449856. XX FH Key Location/Qualifiers FH FT source 1..3107 FT /organism="Flock House virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:12287" FT CDS 40..3036 FT /gene="RNA1" FT /product="protein A" FT /db_xref="GOA:Q66929" FT /db_xref="InterPro:IPR020237" FT /db_xref="UniProtKB/Swiss-Prot:Q66929" FT /protein_id="CAA54399.1" FT /translation="MTLKVILGEHQITRTELLVGIATVSGCGAVVYCISKFWGYGAIAP FT YPQSGGNRVTRALQRAVIDKTKTPIETRFYPLDSLRTVTPKRVADNGHAVSGAVRDAAR FT RLIDESITAVGGSKFEVNPNPNSSTGLRNHFHFAVGDLAQDFRNDTPADDAFIVGVDVD FT YYVTEPDVLLEHMRPVVLHTFNPKKVSGFDADSPFTIKNNLVEYKVSGGAAWVHPVWDW FT CEAGEFIASRVRTSWKEWFLQLPLRMIGLEKVGYHKIHHCRPWTDCPDRALVYTIPQYV FT IWRFNWIDTELHVRKLKRIEYQDETKPGWNRLEYVTDKNELLVSIGREGEHAQITIEKE FT KLDMLSGLSATQSVNARLIGMGHKDPQYTSMIVQYYTGKKVVSPISPTVYKPTMPRVHW FT PVTSDADVPEVSARQYTLPIVSDCMMMPMIKRWETMSESIERRVTFVANDKKPSDRIAK FT IAETFVKLMNGPFKDLDPLSIEETIERLNKPSQQLQLRAVFEMIGVKPRQLIESFNKNE FT PGMKSSRIISGFPDILFILKVSRYTLAYSDIVLHAEHNEHWYYPGRNPTEIADGVCEFV FT SDCDAEVIETDFSNLDGRVSSWMQRNIAQKAMVQAFRPEYRDEIISFMDTIINCPAKAK FT RFGFRYEPGVGVKSGSPTTTPHNTQYNGCVEFTALTFEHPDAEPEDLFRLIGPKCGDDG FT LSRAIIQKSINRAAKCFGLELKVERYNPEIGLCFLSRVFVDPLATTTTIQDPLRTLRKL FT HLTTRDPTIPLADAACDRVEGYLCTDALTPLISDYCKMVLRLYGPTASTEQVRNQRRSR FT NKEKPYWLTCDGSWPQHPQDAHLMKQVLIKRTAIDEDQVDALIGRFAAMKDVWEKITHD FT SEESAAACTFDEDGVAPNSVDESLPMLNDAKQTRANPGTSRPHSNGGGSSHGNELPRRT FT EQRAQGPRQPARLPKQGKTNGKSDGNITAGETQRGGIPRGKGPRGGKTNTRRTPPKAGA FT QPQPSNNRK" FT misc_feature 2719..3107 FT /note="subgenomic RNA 3" FT /experiment="experimental evidence, no additional details FT recorded" FT CDS 2728..3036 FT /product="protein B1" FT /db_xref="InterPro:IPR020237" FT /db_xref="UniProtKB/Swiss-Prot:P68829" FT /protein_id="CAA54400.1" FT /translation="MLNDAKQTRANPGTSRPHSNGGGSSHGNELPRRTEQRAQGPRQPA FT RLPKQGKTNGKSDGNITAGETQRGGIPRGKGPRGGKTNTRRTPPKAGAQPQPSNNRK" FT CDS 2738..3058 FT /product="protein B2" FT /db_xref="GOA:P68831" FT /db_xref="InterPro:IPR024377" FT /db_xref="InterPro:IPR037209" FT /db_xref="PDB:2AZ0" FT /db_xref="PDB:2AZ2" FT /db_xref="PDB:2B9Z" FT /db_xref="UniProtKB/Swiss-Prot:P68831" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAA54401.1" FT /translation="MPSKLALIQELPDRIQTAVEAAMGMSYQDAPNNVRRDLDNLHACL FT NKAKLTVSRMVTSLLEKPSVVAYLEGKAPEEAKPTLEERLRKLELSHSLPTTGSDPPPA FT KL" XX SQ Sequence 3107 BP; 885 A; 744 C; 757 G; 721 T; 0 other; gttttcgaaa caaataaaac agaaaagcga acctaaacaa tgactctaaa agttattctt 60 ggagaacacc agatcacccg aactgaattg ttagtcggga ttgcaaccgt atctgggtgc 120 ggtgccgtag tgtactgcat atccaagttc tggggctatg gggcaattgc gccctatcct 180 cagagtggag ggaaccgagt tacacgcgca ttgcaacggg ctgtcattga caaaacgaag 240 accccgatag agacacgttt ctatccgctt gacagcctgc gtaccgtgac gcctaagcgt 300 gtcgcagaca acgggcacgc cgtttcaggg gccgtacgtg atgccgcacg tcgtttgatc 360 gacgagtcca tcacggccgt tggaggatcc aaatttgagg tcaaccccaa cccaaactca 420 agcactggac tgcgaaacca tttccacttc gccgtcggtg atttggcaca agatttccgt 480 aatgacacac ctgcggatga tgccttcatc gtcggtgttg atgttgatta ttatgtcacc 540 gagcctgatg tgcttttaga gcacatgcgt ccagtagtgt tacacacctt taacccgaag 600 aaagtgagcg gttttgatgc tgactcacca ttcaccatta agaacaactt ggttgaatat 660 aaggttagcg gtggagcagc atgggtccat ccagtttggg attggtgcga agctggtgag 720 tttatcgcta gcagagtccg taccagctgg aaggagtggt ttttacaact accactgcga 780 atgattggtt tggagaaggt tggctatcat aaaatccatc attgtagacc gtggactgat 840 tgtccagatc gtgcacttgt ctacactata ccgcaatatg tcatttggcg atttaattgg 900 attgataccg aactacacgt gcgaaaactg aaacggattg aataccagga cgaaaccaaa 960 cctggttgga acagattgga gtatgtgacc gacaagaatg aactgctggt ttccatcggt 1020 cgagaagggg agcatgctca gattactatc gagaaagaaa agttggatat gctctcggga 1080 ttatccgcca cccaatctgt caacgctagg cttatcggta tgggacacaa ggacccgcaa 1140 tacacatcca tgattgtcca gtattatact ggcaagaagg tagtgtcacc aattagtcca 1200 actgtgtata aacctacaat gccacgcgtc cattggccag taaccagtga cgcagatgta 1260 ccagaagtga gcgcgcgcca atacacactg cctatcgtga gtgactgtat gatgatgcca 1320 atgatcaagc gctgggaaac aatgtctgaa tcaattgaac gtagggtgac ttttgtcgcc 1380 aatgataaga aaccaagcga cagaatcgcc aaaatagccg aaacgtttgt taaattgatg 1440 aatgggccat tcaaagatct tgaccctttg tcgattgaag aaacgattga acggctgaat 1500 aaaccgtccc aacaattaca acttagggcg gttttcgaaa tgattggagt taaacctcgt 1560 caattgattg agtcgttcaa caagaacgaa cctggaatga aatctagccg gataatatcc 1620 ggttttccag acatactttt catcttgaaa gtttccagat acaccttagc gtattcggat 1680 atagttctac atgccgaaca caatgaacat tggtattacc ccgggcggaa cccgactgag 1740 atcgccgacg gtgtttgtga gtttgttagt gactgtgatg ctgaagtcat agaaactgac 1800 ttctccaacc tcgatggcag ggtttccagc tggatgcaaa gaaacatcgc ccaaaaggcc 1860 atggttcaag cattccgccc agaatacaga gatgagatca tttcattcat ggacacgata 1920 atcaattgtc cagctaaagc taaacgcttt ggtttccgat atgagcctgg tgtaggcgtt 1980 aaaagtggaa gtccaacaac cacgccacat aacacccaat acaatggatg tgtcgaattt 2040 acagctctga cctttgagca tcctgatgct gaacctgaag atttgttccg tttaatcgga 2100 ccgaagtgcg gtgatgatgg tctttcccgg gctatcattc aaaaatcaat taatcgcgct 2160 gccaagtgtt tcggcctcga actcaaagtt gaacgataca atccagagat aggtctttgt 2220 ttcctgtctc gtgtatttgt ggacccgctc gcaactacga ccacaattca agacccactg 2280 cgtactctgc gaaaactaca tcttacaaca agagatccaa cgataccatt agctgatgcg 2340 gcttgcgacc gtgtcgaagg ctatctctgt accgatgcgc ttactccgtt aatttcggat 2400 tattgcaaaa tggtactacg actctacggg cccactgctt caactgagca ggtgaggaac 2460 caacgtagaa gccggaataa agagaagccc tactggttga cttgtgacgg atcatggcca 2520 cagcatccgc aagacgccca tttgatgaag caggttttaa tcaaacgtac agccattgac 2580 gaagatcagg tcgatgcact cattgggcgt tttgccgcaa tgaaggatgt ctgggagaaa 2640 attacacatg acagcgagga gagcgccgct gcgtgtacgt ttgatgaaga cggcgttgcg 2700 ccgaactccg tggacgaatc gttaccaatg ttaaacgatg ccaagcaaac tcgcgctaat 2760 ccaggaactt cccgaccgca ttcaaacggc ggtggaagca gccatgggaa tgagctacca 2820 agacgcaccg aacaacgtgc gcagggacct cgacaacctg cacgcttgcc taaacaaggc 2880 aaaactaacg gtaagtcgga tggtaacatc actgctggag aaacccagcg tggtggcata 2940 cctagaggga aaggcccccg aggaggcaaa accaacactc gaagaacgcc tccgaaagct 3000 ggagctcagc cacagccttc caacaaccgg aagtgacccc ccacccgcaa aactgtaggt 3060 ggctcttagg agcacccaca cccgttctag cccgaaaggg cagaggt 3107 //