ID X69757; SV 1; linear; genomic RNA; STD; VRL; 7648 BP. XX AC X69757; XX DT 08-JAN-1993 (Rel. 34, Created) DT 25-JAN-1993 (Rel. 34, Last updated, Version 5) XX DE Barley yellow mosaic virus RNA for polyprotein RNA1 XX KW capsid protein; helicase; p1 protein; polyprotein; proteinase; replicase; KW RNA 1. XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-7648 RA Peerenboom E.; RT ; RL Submitted (11-DEC-1992) to the INSDC. RL E. Peerenboom, Max-Planck-Institut fuer Zuechtungsforschung, RL Carl-von-Linne-Weg 10, 5000 Koeln 30, FRG XX RN [2] RP 1-7648 RX PUBMED; 1588327. RA Peerenboom E., Proels M., Schell J., Steinbiss H.H., Davidson A.D.; RT "The complete nucleotide sequence of RNA 1 of a german isolate of barley RT yellow mosaic virus and its comparison with a japanese isolate"; RL J. Gen. Virol. 73:1303-1308(1992). XX DR MD5; de0bf370411778d3fe53ce35c083c35f. XX CC Barley yellow mosaic virus is a Bymovirus type member. XX FH Key Location/Qualifiers FH FT source 1..7648 FT /organism="Barley yellow mosaic virus" FT /strain="BaYMV-G" FT /mol_type="genomic RNA" FT /db_xref="taxon:12465" FT CDS 174..7412 FT /gene="RNA1 BaYMV" FT /product="polyprotein RNA1" FT /product="P1" FT /product="C1 (helicase)" FT /product="NIa (proteinase)" FT /product="NIb (replicase)" FT /product="capsid protein" FT /db_xref="GOA:Q04574" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:Q04574" FT /protein_id="CAA49412.1" FT /translation="MEQTLAQAVSRRGKTNTPMAEERKPFSPMNFSANFVAPELFYSAN FT VRKIKNIFRERSTTRFLDAISSDFELVAFLTLSPAHLMQLETTLRQEIRSCVVPIVTSD FT ASFETVAVIKTALDGMRFHFGHTTLEKGWMSMMRHAESCLQESSSSAVNDLQMQIKRVG FT SLLLSGKNRVESCELSVLNLTARRFRIEYGLNGTYFGEHVAMLLDLKRYIYGTVPKEFC FT WAKTKKHSLFTTPKWIKRTPIDCFLFCLRVIPILHRFGVAISLLYWSCVAALNFPAFMA FT FLFKRQFAKYLAHSFAKHSIYFIFLTIIAILWSFRTFASQKPKIVLQARSTAEKEKKLM FT MILASVVGITYLFDYDIAEALGNCLHKISRLSSYLLDDHQGIASRMFGASYGLQAGDSA FT EDAVTTIISDLLSVTFKIVDEDASQGTVEDASETTFHSWVGVNTLAGRNMSRPLQYDVN FT KTYALTPQNVQLQARAMADANNCWSMVVGHTGSGKSTYLPVQYSNYLSTKSDRRQQILI FT CEPTQAATENVCAGVAANLGRAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPSFIST FT FDAIFLDEAHDVKEHSLVFESICDTFKSVRKFYVSATPRDGSVCPEAARKYPLHVETSV FT CDSYRKFIAAQGGGDLLDISKHDTALVFLAGRPECIKAANAWNASVTGEKRAFPLSSDN FT FATDFSMLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGHTMRPCLDLNQKSLRLDRR FT RVTRNERQQRIGRAGRLKDGYAIVCGDVDRAVNVISPDVLYGAALLSFKHNVPFYMNET FT FESSWLEGVTKAQADTMTIFKLPIFLTRDLINADGSVAREFLDVLKKHQFTTSDIKQAP FT SVTAKHIFPTWASYFSLHQALHYGDDKDEIPHELRYARVPFSVTTLSKFDWPALALACE FT KHRASMSNVFAGIEEPARVVTLQTNPANIQASITHLTHMSKNYKTLIENNQHVRQSMMT FT NVMFKWFSSTRITKDLDRNLRRCTDNLSVVEATLSSLRQILAGNTQVHATPHMQSTLED FT IIELQASDTLTEESLANALGIFVPKCNLFLLLATKGFKLVYVVCILLLVNLVYTGLRKW FT REHLKQKGSNEILTNTMPVSEGGEILAEVMKMEPKMRKNIKRDMDAAVESKLCGFTFVF FT PDDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAY FT EKRPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADPNRDMNLVADKLRSFLDTKLVVGH FT HQRKLLEETANVVIKDTKGTAHKMEISQHDPDFLKQNGSGKVGYPEHRGQFRQEGVAVT FT GDYDLEAEFGTDTDEISFGASTGILLSQVGVDVATRVGRICIGTFNMNCYFYSDWILVP FT GHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLDVIAIRRPAILRPRTKLVKAFA FT IEEPVIAQMVFVDAQGVRKFTQSDWARKEENSGRWSHKISTVLGMCGCPVLDVGKNRLI FT GIHVATNYTKKRNEFQPFTQEVVDFINGPGTKIPYCPWVFDRPACGYSSHNALFEKPTT FT LADVIHMQASDGLHNINNAIEGFGSSLKGQLVSPPTESTRQRFDKLFGSGSFELIGQMN FT KGLIDKHVIVGENDDVYDFMREHPTFTWLKDFMNEYAPSVLSYSAYYKDLCKYNRAKHV FT LTYNPEELHCATKGLIKMLEDAGLTQGSVRTPQQVVSDIQWNTSAGPSYQGKKRDLCAH FT LSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAM FT KFYVDDFNKKFYATNLKAPHTVGINKFGRGWEKLHDKLNRPGWLHGSGDGSRFDSSIDP FT FFFDVVKTIRKHFLPSEHHKAIDLIYDEILNTTICLANGMVIRKNVGNNSGQPSTVVDN FT TLVLMTAFLYAYIHKTGDRELALLNERFIFVCNGDDNKFAISPQFDEEFGHDFSPELVE FT LGLTYEFDDITSDICENPYMSLTMVKTPFGVGFSLPVERIIAIMQWSKKGGVLHSYLAG FT ISAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQSSTALPIPSMLDVYRLHYGDD FT EIWLQAADPLTDAQKEAAHTAAADRARLDLADADRRRKVEADRVEAARVKKAADAVLKP FT VTLTATRMPTEDDGKLKTPSGARIPSSAADGNWSVPATKQVNAGLTLKIPLNKLKSVPK FT SVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDALIPFIGWCCNNGTSDKHAENQV FT MQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVAHWSMKHGAS FT ANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRKTTNHRVLDS FT DGHPELT" XX SQ Sequence 7648 BP; 2150 A; 1769 C; 1714 G; 2015 T; 0 other; aaaaaataaa acaaccctaa accaaaacaa acaaaacgaa acaaacacaa acatcgcacg 60 cttcccgagc tcacaacacc tgtagagtga tttttgtcat cctactgttt gtaagctttt 120 cagcaaatca acccgcttgc tttcgcacct ccttcacctt cactctcgct cttatggagc 180 aaaccctagc tcaagctgtg tcacggagag gtaaaacaaa cacacctatg gcagaagagc 240 ggaaaccttt cagccccatg aatttttccg caaactttgt tgctcctgag ctcttttata 300 gtgctaatgt gaggaaaatt aaaaatatct tcagagagcg cagcacaact cggtttctgg 360 atgcaatttc aagtgatttt gagctcgttg cttttctcac tttgagtccc gctcacttaa 420 tgcaacttga gacaactctg cgccaagaaa tacgttcgtg tgttgtgcca attgttacct 480 ctgatgctag cttcgaaaca gtcgctgtca tcaaaactgc tctggatggc atgagatttc 540 actttggaca caccactctt gaaaaggggt ggatgtctat gatgcgccat gcagagagtt 600 gcctgcaaga gagctcctct tcggctgtga atgatctgca gatgcagatt aaacgcgttg 660 gatcattgct cttgagtgga aaaaatcgcg tagaaagctg cgaactatct gtcttgaacc 720 tcacagcgcg acgtttcagg atcgaatatg ggctaaatgg tacatacttt ggcgaacatg 780 ttgctatgct actcgactta aagcgttata tctatggtac cgtgccaaaa gagttttgtt 840 gggcgaaaac caaaaagcac tcgctattca caacccccaa gtggatcaag cgtacgccca 900 tcgactgttt cttgttctgt cttcgcgtta tccctatctt acataggttt ggtgtggcca 960 tatcactcct ttactggtcg tgtgttgctg ctctgaattt tcctgctttt atggctttct 1020 tatttaagcg tcagtttgct aagtatttag ctcactcttt tgctaaacac tccatctact 1080 ttatattttt aactataatt gctattttat ggtcttttcg cacttttgct tctcaaaaac 1140 caaaaatagt gcttcaggct aggagcacag cagaaaaaga gaaaaagctt atgatgattc 1200 tagctagtgt cgttgggatc acttatctct tcgattatga catagcagaa gctctcggga 1260 attgtctaca taaaataagc cgtctatcct catatcttct cgacgaccat caaggcatcg 1320 catcacgaat gtttggagcg agctatgggc ttcaggctgg cgatagtgct gaggatgcag 1380 ttacaacgat aatcagcgac ctactgtctg ttacttttaa aattgtggac gaagacgcat 1440 cacagggcac cgtggaggat gcatctgaga caacctttca cagttgggtt ggtgttaaca 1500 cacttgcagg tcgcaatatg tcaagaccac tccagtatga cgtcaataaa acatatgcac 1560 tcacacctca aaatgtccag ctccaagcgc gagctatggc agacgctaac aactgctggt 1620 caatggttgt tggtcataca ggatctggga agtcaacata cttacctgtg cagtactcca 1680 attacttatc caccaagagt gataggcgac agcagattct tatctgcgag ccaactcagg 1740 ctgccactga gaacgtttgc gctggcgttg ctgccaatct tggcagagct gtttacgggc 1800 gccatgaggg ttggtccaga atgggggatc attgcattca agttatgacg tatggttccg 1860 cgctccagtg tcatgctatg gaccctagct tcatatcaac tttcgacgca atcttccttg 1920 atgaagcaca cgacgtcaaa gagcactctc tagtctttga gagcatttgt gacacattta 1980 aatccgttcg aaagttctat gtttcagcca ctcctagaga tggaagtgta tgtcctgaag 2040 cagccaggaa atatccttta catgttgaaa ctagcgtttg cgattcgtat cggaagttca 2100 ttgcagctca aggtggggga gatttgctgg acatctcaaa acatgacaca gctttagtct 2160 ttctagcagg acggcctgag tgtattaaag ctgctaatgc ctggaatgct agtgtcaccg 2220 gtgagaagcg cgcctttcct ttgtcaagcg acaactttgc taccgacttc tcaatgctca 2280 ccgagaggct caaaacacac aaaaccatca tcttcaccac gaacataatt gagacaggtg 2340 tcactcttag cgttgattgt gttgttgatt tcggccatac gatgcgccca tgtttggatc 2400 tcaatcaaaa atcattacgt cttgatcgac gcagagtgac gcgaaacgaa agacagcaga 2460 gaattgggcg agcaggtcgg ctcaaagacg ggtacgccat agtgtgtgga gatgttgata 2520 gggctgtaaa tgtcatctct cctgatgttc tttatggtgc cgctcttctg agttttaaac 2580 acaatgtgcc tttctacatg aacgaaacat ttgagagttc ctggttggag ggtgttacaa 2640 aggcacaagc tgacacaatg acaatattca agcttcctat atttctaaca cgagacctca 2700 ttaatgcaga tggctcagtt gctagggagt ttcttgatgt tttaaagaag catcaattca 2760 caacaagtga cataaagcaa gcaccaagtg tcacagccaa acatatcttc ccaacttggg 2820 cttcatactt ctctctccat caggcgcttc attatggtga tgacaaggat gagataccac 2880 acgagttgcg atatgcgcgc gttcctttct ccgtcacaac tttgagcaaa ttcgattggc 2940 cagccttagc tcttgcatgc gagaaacata gagcttccat gtcaaatgtg tttgctggca 3000 tcgaggaacc cgcacgcgtt gttactctac aaacaaatcc tgcgaacata caagcaagca 3060 tcacacattt aacgcatatg agcaagaact ataaaactct tattgaaaac aaccagcacg 3120 tgcgccaatc catgatgacg aatgttatgt tcaagtggtt ttcttccact cgcattacca 3180 aagatcttga taggaacttg cgaagatgca cggataacct ctcagttgtc gaggccacgc 3240 ttagctcact taggcaaatc ttagctggca acacgcaggt tcacgcaacg ccgcacatgc 3300 agagcactct tgaggatatt attgaactcc aggctagcga cacactcacg gaagaaagct 3360 tagcaaacgc acttggcatc tttgtcccaa agtgcaacct ctttctgctg ctagctacta 3420 aaggtttcaa gcttgtgtac gttgtctgca tcttacttct tgtgaacctt gtttacactg 3480 gtcttcgtaa gtggcgcgag catctcaagc aaaagggaag taacgaaatc ctaactaaca 3540 caatgccagt tagcgaaggg ggcgaaattc tcgctgaagt tatgaaaatg gagcctaaaa 3600 tgagaaagaa catcaagagg gatatggatg cagctgttga gagcaaacta tgtggcttca 3660 cttttgtttt tccagatgat gataaaattg gtcttgaagg caagggaaac aaataccgcc 3720 ctcgcgaaga cgctcgcctg atgtactcca ctagagaaga cgccaccttt gacgcctgga 3780 atgagaaagc gaaggaaaga cgcaagaaag taaccgacaa agctgagcca gagcttcgca 3840 gagcctatga gaagagacca tacttcaatt tctacgacct tcaaacagat agcaacattc 3900 tggaagctat tttctacacc actgaaggtg atgagttttt ccgaacagca gaccctaaca 3960 gggacatgaa cttggttgct gataaactgc gctcttttct cgatacaaag cttgttgttg 4020 gacaccatca gcggaagcta ctagaagaaa cagccaatgt tgttatcaag gacacgaagg 4080 gaactgcgca caagatggaa atttcacagc atgatccaga ttttctgaag cagaatgggt 4140 ccggcaaagt tgggtatcca gaacaccgag gacagtttcg gcaggaagga gttgccgtca 4200 caggggatta cgatcttgaa gctgagtttg gcaccgatac tgatgaaata agctttgggg 4260 cctctactgg aattttattg tcacaagttg gggtcgatgt tgcaactcga gttggaagaa 4320 tttgcattgg cactttcaat atgaactgtt acttctatag cgactggatt ctagttccag 4380 gacacctgca agatagatct ggcaacgtaa caattcaatt ccctgaccaa acagtgcaaa 4440 ccacaaccga cgcactcaac gcaaatggtg tgaaacgatt ctatggatta gatgtaatag 4500 caattcgtcg ccctgctatc ttgcggcctc gcaccaagtt ggtcaaagct tttgctattg 4560 aggaaccagt tatcgcacaa atggtctttg ttgatgcaca gggagtccgt aagttcactc 4620 aatctgattg ggccaggaag gaggagaatt ctgggcgttg gtcacacaag atctccactg 4680 ttcttggtat gtgcggatgc ccagtcttgg acgttggaaa gaacagatta atagggatcc 4740 atgtcgccac aaactacaca aagaagcgca acgagttcca acccttcact caggaggttg 4800 tcgactttat aaatggacct ggaacaaaaa tcccctactg cccatgggta tttgatagac 4860 cggcttgtgg gtattcatcc cacaacgctt tgttcgagaa accaaccaca ctggctgacg 4920 tcattcacat gcaggcttct gatggtttgc acaacatcaa caatgccatt gagggttttg 4980 ggagctcact gaagggtcag cttgtgtcac cacctactga atccaccagg caacgtttcg 5040 ataagctgtt tggtagcggc agctttgagc tcattgggca gatgaacaaa ggcttaatcg 5100 acaagcacgt gattgttggg gaaaacgatg atgtttatga cttcatgcgc gagcacccaa 5160 catttacttg gttgaaagat ttcatgaatg aatatgcgcc cagtgttttg tcttattctg 5220 cttactacaa ggacctttgt aagtataatc gtgcaaaaca cgtgctcact tacaacccag 5280 aagagctcca ttgtgcgacg aaaggactga tcaagatgtt ggaagacgct ggcttgacac 5340 aaggcagtgt gaggacaccc caacaagttg tttcggacat tcaatggaac acttccgctg 5400 gaccaagtta tcaagggaag aaacgcgacc tctgtgccca cttgagcgat gacgaggtgc 5460 tgcatcttgc tgaggtttgt cgtcaacaat ttcttgaggg caagtcaact ggagtgtgga 5520 acggttctct gaaagctgaa ttgagaacca ttgagaaagt tgaggcggag aaaacgcgcg 5580 ttttcacagc ctctcccata acaagcctgt ttgccatgaa attctacgtt gatgacttta 5640 acaagaagtt ctatgctacc aatctgaaag ccccccacac tgttggcatc aataagttcg 5700 gtaggggatg ggaaaaattg catgacaagc ttaatcgccc tggatggttg cacggcagtg 5760 gggatggttc taggttcgat agctctatcg atcctttctt ctttgacgtt gtgaaaacta 5820 ttcgtaagca ctttctccct tctgagcatc ataaagccat tgatctcata tatgatgaga 5880 ttctcaacac aaccatctgc ctggctaatg ggatggttat caggaagaat gttggaaaca 5940 atagcgggca gcctagtact gttgttgaca acacacttgt gcttatgact gcattcctct 6000 acgcatacat tcacaagaca ggggatcgtg agttagcctt gctaaacgag cgtttcatct 6060 ttgtttgcaa cggtgatgac aataagtttg ccatatctcc gcagtttgat gaagagtttg 6120 ggcacgattt ttccccagaa cttgttgaac ttggacttac gtatgagttt gatgacatca 6180 ctagcgacat ttgcgagaat ccttacatgt ccctcactat ggttaaaact ccttttggtg 6240 ttggtttctc tcttcccgtg gaaagaatca tagccataat gcagtggtcc aagaaagggg 6300 gggttttgca ctcatattta gctggcatct ctgcaattta cgaatccttc aacacaccaa 6360 aactcttcaa atcaatctat gcgtaccttc tttggctcac tgaggagcac gaggcagaaa 6420 ttcttgcagc catgactcaa tcctcaaccg cccttcctat accatcaatg ctcgatgttt 6480 atcggttgca ctatggtgat gatgaaattt ggctgcaagc agctgatcct ctcactgatg 6540 cgcaaaaaga agctgcacac actgccgcag ctgatagagc acgcctcgac ctagccgacg 6600 ctgaccgtag acgtaaagtt gaagctgacc gtgtggaagc ggcaagagtc aaaaaggcag 6660 ctgatgctgt gctaaaacca gttaccctca cagcaacacg catgcccaca gaagatgatg 6720 gcaaacttaa aacgccatct ggtgctagaa taccatcatc agctgcagat ggtaactgga 6780 gcgtgccggc aacgaagcaa gttaacgctg gtttaacact caaaattccc ctgaataagc 6840 tcaaaagtgt gcctaagtct gttatggaac ataacaactc agttgcactt gaatctgagc 6900 taaaagcctg gactgatgct gtgcgcacaa gtttgggtat cacaactgat gaggcatgga 6960 tcgatgccct catacccttc atcggatggt gctgcaacaa tggcacctca gacaagcatg 7020 ctgagaatca agtaatgcaa attgacagcg gaaagggagc tgtcacagag atgagtctgt 7080 ccccatttat tgttcatgct cgaatgaatg gtggactccg aaggatcatg cgtaactaca 7140 gtgatgaaac cgtcttactc atcacaaaca acaaactagt tgcacattgg tcaatgaagc 7200 atggcgcttc tgcaaatgca aaatatgctt tcgatttctt cgtcccacga tcatggatga 7260 acccacagga catcgaagta tcaaagcaag cgcgcttagc agcacttgga actggaacgt 7320 ataacaccat gttaacttcc gacactacca atctgcgtaa gacaaccaac cacagggttc 7380 tggactcaga tggacaccca gaactaacct aaaccatcac cccgtgcctt atacatcacc 7440 cacccccact cataattcag tctttaaatt atgttcgtga cgtctttgta tcaggctcgg 7500 aacggttcta tgatccatat gcctttggca gttacaatgt cagcattctc attgaggagt 7560 atgacagcgt tgatcagccg ttttcaatca tccgtcgttg gatggtggtg cacttagtgc 7620 acttacgagt accagaaggt aataaaaa 7648 //