ID   X63015; SV 1; linear; genomic DNA; STD; VRL; 2743 BP.
XX
AC   X63015;
XX
DT   11-AUG-1999 (Rel. 60, Created)
DT   07-MAR-2015 (Rel. 124, Last updated, Version 4)
XX
DE   Tomato yellow leaf curl Thailand virus-[1] complete genome (TYLCV-TH A-DNA)
XX
KW   coat protein.
XX
OS   Tomato yellow leaf curl Thailand virus-[1]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2743
RA   Rochester D.E.;
RT   ;
RL   Submitted (06-NOV-1991) to the INSDC.
RL   D.E. Rochester, Box 1137 Biology Dept, Washington University, St. Louis, MO
RL   63130, USA
XX
RN   [3]
RX   PUBMED; 8126446.
RA   Rochester D.E., Fauquet C.M., Beachy R.N.;
RT   "Complete nucleotide sequence of the Geminivirus, Tomato yellow leaf curl
RT   virus (Thailand isolate)";
RL   J. Gen. Virol. 75:477-485(1994).
XX
DR   MD5; 4d3263acb8a54b0a01e6ed0f28dd641f.
DR   BioSample; SAMEA3283150.
DR   EuropePMC; PMC2170441; 17963488.
DR   EuropePMC; PMC2224568; 17977971.
DR   EuropePMC; PMC2974675; 20958988.
DR   EuropePMC; PMC3095596; 21603653.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2743
FT                   /organism="Tomato yellow leaf curl Thailand virus-[1]"
FT                   /mol_type="genomic DNA"
FT                   /clone="pDR9"
FT                   /db_xref="taxon:221541"
FT   misc_feature    1..181
FT                   /note="common region A-DNA"
FT   CDS             282..620
FT                   /gene="precoat ORF"
FT                   /db_xref="GOA:Q9QNL5"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QNL5"
FT                   /protein_id="CAA44743.1"
FT                   /translation="MWDPLLNEFPENVHGFRCMLAVKYLQAVEKTYSPDTLGFDLIRDL
FT                   IGVIRAKNYVEASSRYSHFHSRLESTSPSELRQPIQQPCCCPHCPRHKRAGMEEPTCIQ
FT                   KAQDLQNV"
FT   CDS             442..1212
FT                   /gene="coat protein ORF"
FT                   /db_xref="GOA:Q9QNL4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QNL4"
FT                   /protein_id="CAA44744.1"
FT                   /translation="MSKRPADILISTPVSKVRRRLNFDSPYNSRAAVPTVRVTKGQVWK
FT                   NRPAYRKPRIYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLYDVTRGIGLTHR
FT                   VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEP
FT                   STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH
FT                   TENALLLYMACTHASNPVYATLKVRSYFYDSVTN"
FT   CDS             complement(1209..1613)
FT                   /gene="AL3 ORF"
FT                   /db_xref="GOA:Q76R33"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q76R33"
FT                   /protein_id="CAA44746.1"
FT                   /translation="MDSRTGELLTATQSESGVYIWTVKNPLYFKITRHLERPFQRNHDI
FT                   ITLQIQFNYNLRKALGIHKCFLACKIWTHLHPQTSRFLRVFKYQCNKYLNRLGVISINN
FT                   VIRAISHVLYNVLEGTIDVIEEHDIKFNIY"
FT   CDS             complement(1354..1758)
FT                   /gene="AL2 ORF"
FT                   /db_xref="GOA:Q9QNL3"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QNL3"
FT                   /protein_id="CAA44745.1"
FT                   /translation="MRSSSPSKAHSTQVPIKVQHRIAKRTTRRRRVDLPCGCSYFVAIG
FT                   CHNNGFTHRGTTHCNSIREWRIYLDGQKSPIFQDNQAPRETIPEEPRHNHVTNPVQLQP
FT                   EESVGDTQMFSSLQNLDSFTSSDLAFLKSI"
FT   CDS             complement(1661..2743)
FT                   /gene="AL1 ORF"
FT                   /db_xref="GOA:Q9QNL2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QNL2"
FT                   /protein_id="CAA44747.1"
FT                   /translation="MPPSKKFLINAKNYFLTYPHCSLTKEEALSQILNLSTPTNKLFIR
FT                   ICRELHEDGTPHLHLLIQFEGKFKCQNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKAYM
FT                   EKDGDVLDHGIFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH
FT                   NLNSNLDRIFTPPIEEYISPFSSSSFNQVPEELEEWACNNVLSRARPLRPISIVIEGDS
FT                   RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQ
FT                   SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAIKNAIFVTLEGPLY
FT                   SGTYQGATPNSQEDNQTTES"
XX
SQ   Sequence 2743 BP; 732 A; 532 C; 615 G; 864 T; 0 other;
     attgacttgg tcaatcgggt cctctcaaac ttggctatgc aatcggggaa tgggtcctta        60
     ttatagttga ggacctaaat ggcataattg taaataagtg tatgaaattc aaaatttaaa       120
     attcaatcgt ggccatccgt ataatattac cggatggccg cgattttttt aaagtggtcc       180
     ccttgatgtg atatgtcatc caatcagaac actctttgaa agcctaatta tttatggtcc       240
     cctatttaag acttagtccc caagtttcgg cgaaattcaa aatgtgggat ccactactaa       300
     acgaatttcc agaaaacgtc cacggtttcc gttgtatgtt agcggtgaag tatctgcaag       360
     cggtcgagaa gacttattcc cctgatactc tagggtttga tctcatccgt gatctcatcg       420
     gtgtaattcg tgcgaagaac tatgtcgaag cgtccagcag atattctcat ttccactccc       480
     gtctcgaaag tacgtcgccg tctgaacttc gacagcccat acaacagccg tgctgctgtc       540
     cccactgtcc gcgtcacaaa agggcaggta tggaagaacc gacctgcata cagaaagccc       600
     aggatctaca gaatgtatag aagccctgat gtccctaagg gatgtgaggg cccatgtaag       660
     gtccaatctt tcgatgcgaa gaacgacatt ggacatatgg gcaaggtaat atgtctgtat       720
     gacgttaccc gtggtattgg gcttactcat cgagttggca agcgtttctg tgtgaagtca       780
     ctttattttg tcgggaagat ctggatggat gaaaatatta aggttaagaa tcatactaac       840
     accgttttat tctggatagt tagggatcgg cgtcctactg gaacgcctta tgattttcag       900
     caggtcttta atgtatatga taatgaaccc agcactgcta ctgtgaagaa cgaccagcgt       960
     gatcgtttcc aggttataag gaggttccag gcaacagtta ctggtggaca atatgcagct      1020
     aaggagcagg cgattattag aaagttttat cgtgttaata attatgtagt ttataatcac      1080
     caggaagctg ggaagtatga gaaccatact gaaaatgctt tgttgttata tatggcatgt      1140
     actcatgcct ctaaccctgt gtatgctact ttgaaagtca ggagttattt ctatgactca      1200
     gtgacgaatt aataaatatt aaattttata tcatgttctt caattacatc aattgttcct      1260
     tctaatacat tgtacaatac atgagatatt gccctaatta cattgtttat actaatcacg      1320
     cctaatctat ttaaatattt attacattga tatttaaata ctcttaagaa acgcgaggtc      1380
     tgaggatgta aatgagtcca gattttgcag gctagaaaac atttgtgtat ccccaacgct      1440
     ttcctcaggt tgtagttgaa ctggatttgt aacgtgatta tgtcgtggtt cctctggaat      1500
     ggtctctcta ggtgcctggt tatcttgaaa tataggggat ttttgaccgt ccagatatat      1560
     acgccactct ctgattgagt tgcagtgagt agttccccgg tgcgtgaatc cattattgtg      1620
     acagcctatg gcgacgaagt acgaacatcc acaaggtaga tcaactctcc gtcgtctggt      1680
     tgtcctcttg gctattcggt gttgcacctt gataggtacc tgagtagagt gggccttcga      1740
     gggtgacgaa gatcgcattt tttatagccc agtttctaag tgcggagttc ttttcctctt      1800
     ccaagtactc tttatagctg gagtttggtc caggattgca gaggaagata gtgggaattc      1860
     cgcctttaat ttgaactggt ttgccgtatt tggtgttgct ttgccagtcc ctttgggccc      1920
     ccatgaactc tttaaagtgt tttagataat gcggatcgac gtcatcgatg acgttgaacc      1980
     acgcatcatt attatacact tttggactta aatctaaatg gccacacaga taattatgtg      2040
     gtcccaatga cctagcccac atcgtcttcc ctgttctgct atcaccctca atgactatac      2100
     ttattggtct caatggccgc gcacgactga gaacattatt acaagcccac tcttcaagtt      2160
     cttcgggaac ttgattgaaa gaagaagaag aaaagggaga aatatattcc tctattggag      2220
     gagtaaaaat cctatctaaa ttagaattta aattgtgaaa ttgtaaaaca aaatctttag      2280
     gggccttttc cctcagtata ttgagggccg aagccttgga ccctgaattg attgcctcgg      2340
     catatgcgtc gttggcagat tggcaacctc ctctagccga tcttccatcg atttggaaaa      2400
     ttccatgatc aagcacgtct ccgtcttttt ccatgtatgc tttaacatct gttgagcttt      2460
     tagctccctg aatgttcgga tggaaatgtg ctgacctggt tggggatgtg agatcgaaga      2520
     atcggttatt ttggcatttg aattttcctt cgaattggat gaggagatgc aggtgaggag      2580
     tcccatcttc atggagttcc ctgcagattc tgatgaataa tttattagtt ggagttgata      2640
     ggtttaatat ttgggagagt gcttcttctt tggtgagtga gcagtgtggg tatgtgagga      2700
     aataattctt ggcatttatt agaaatttct ttgaaggagg cat                        2743
//