ID X62493; SV 1; linear; genomic RNA; STD; VRL; 4789 BP. XX AC X62493; XX DT 29-MAY-1992 (Rel. 32, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 7) XX DE Artichoke Mottled Crinkle Virus complete genome XX KW genomic RNA. XX OS Artichoke mottled crinkle virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Tombusvirus. XX RN [1] RX PUBMED; 8021582. RA Tavazza M., Lucioli A., Calogero A., Pay A., Tavazza R.; RT "Nucleotide sequence, genomic organization and synthesis of infection RT transcripts from full-length clone of artichoke mottle crinkle virus"; RL J. Gen. Virol. 75:1515-1524(1994). XX RN [2] RP 1-4789 RA Tavazza M.; RT ; RL Submitted (07-OCT-1991) to the INSDC. RL M. Tavazza, E N E A Dip. Sviluppo e Ricerche Agroindustriali, Div RL Ingegneria Genetica CP, Via Anguillarese 301, 00060 Santa Maria di RL Galeria-Roma, ITALY XX DR MD5; c101a74504aab234a78b9de3192507aa. DR EuropePMC; PMC112128; 10864632. DR EuropePMC; PMC136688; 12438600. DR EuropePMC; PMC1370487; 13130137. DR EuropePMC; PMC3234231; 22174683. DR EuropePMC; PMC516415; 15367615. DR RFAM; RF00171; Tombus_5. DR RFAM; RF00176; Tombus_3_IV. DR RFAM; RF00215; Tombus_3_III. DR RFAM; RF00510; Tombus_IRE. XX FH Key Location/Qualifiers FH FT source 1..4789 FT /organism="Artichoke mottled crinkle virus" FT /map="complete genome" FT /isolate="AMCV-Bari Dr.Gallitelli isolate" FT /mol_type="genomic RNA" FT /clone_lib="Oligo dT and random primed cDNA library in pUC9 FT clone(s)" FT /db_xref="taxon:12142" FT CDS 180..1070 FT /product="protein of 33 kDa" FT /db_xref="GOA:Q65014" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:Q65014" FT /protein_id="CAA44355.1" FT /translation="METIKSWICPKKEIFVGDFAIGVNRKVPVDIFQLVCRVVLRYMRT FT GKIECDSDSMTKFLVELLKTDCAAKWEWFMKRRQRGDYVIPLSIAALPIVPLLSYATRA FT RAVSVKAFGNELSLNVRVPRPSVPKKGLLLRLAAGLALAPICALAMYATLPREKLSVFK FT LRTEARAHMEDEREATDCLVVEPARELKGKDGEDLLTGSRMTKVVASTGRPRRRPYAAK FT IAQVARAKVGYLKNSPENRLIYQRVMIEIMDKDCVRYVDRDVILPLAIGCCFVYPDGVE FT ESAALWGSQESLGVK" FT CDS 180..2636 FT /transl_except=(pos:1068..1070,aa:OTHER) FT /product="protein of 92 kDa" FT /note="readthrough stopcodon of p33" FT /db_xref="GOA:Q96606" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:Q96606" FT /protein_id="CAA44356.1" FT /translation="METIKSWICPKKEIFVGDFAIGVNRKVPVDIFQLVCRVVLRYMRT FT GKIECDSDSMTKFLVELLKTDCAAKWEWFMKRRQRGDYVIPLSIAALPIVPLLSYATRA FT RAVSVKAFGNELSLNVRVPRPSVPKKGLLLRLAAGLALAPICALAMYATLPREKLSVFK FT LRTEARAHMEDEREATDCLVVEPARELKGKDGEDLLTGSRMTKVVASTGRPRRRPYAAK FT IAQVARAKVGYLKNSPENRLIYQRVMIEIMDKDCVRYVDRDVILPLAIGCCFVYPDGVE FT ESAALWGSQESLGVKXGGLVRLPGVVTQINRDIPSGVLLPQEVLEVRAGPPNAKDRNIY FT MVAGCPSQARFLVHNHCLKNLKRGLVERVFCVERNGRLTRTPQPTKGSFGRLSPFRKAV FT CEKVGVAHRLGYDGFLSYYSGAKLRTYTRAVESLHITPVSERDSHLTTFVKAEKISTSK FT GDPAPRVIQPRNPRYNVELGRYLRHMESKLMKAVDGVFGETTCIKGYTADEVGAIFREK FT WDRFDKPVAIGLDASRFDQHCSVEALQYEHSFYRAMYPGNKLLSKLLEWQLHNKGKGYV FT PDGTITYRKEGCRMSGDINTSLGNYLLMCAMIHGYMRHLGINEFSLANCGDDCVLIVER FT RNLKQIQRTLPEYFLNLGFTMKVEPPVFQLEEVEFCQAHPVQFQGGWKMVRNVRTAMSK FT DVHCVNNIRDLATRRAWSNAQHHGGLALSAGIPVVEKFYSRFTLYDVPRKHQRIDTVTN FT VHKWRGSGGSHTVTPESRASFWAAFGLTGDEQLALEDRLDRWEMDLFGEEGVDAHEPSI FT LDSAVA" FT misc_RNA 2635..4789 FT /note="subgenomic RNA 1" FT /experiment="experimental evidence, no additional details FT recorded" FT CDS 2667..3833 FT /product="coat protein of 41 kDa" FT /db_xref="GOA:P14836" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/Swiss-Prot:P14836" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAA44357.1" FT /translation="MAMVKRNNNTGLIPVSTKQLMALGAAAGASALQGFVRNNGAAIVG FT KVVDVGQKVYKAVKKRGGKKQQQIKHVGGTGGAIMAPVAVTRQLTGSKPKFTGKTSGSV FT TVTHREYLSQVNMSTGFQVNGGIVGNLLQLNPLNGTLFSWLPAIASNFDQYSFNSVLLH FT YVPLCATTEVGRVAMYFDKDSEDPEPADRVELANYSVLAETAPWAERALWVPTDRIKRF FT CDDSSTLDHKLIDLGQLGVATYGGAGTNAVGDIFISYSVTLYFPQPTNTLLSTRRLDLA FT GTPVTASGPGYILLTRTPTVLTMTFRATGTFVISGAYRCLTSTVLGLTGGVNVNSITVV FT DNVGTSSSFFINCTVSNLPSVITFTTTGITSATIQCNRATRQNDVSLI" FT misc_RNA 3856..4789 FT /note="subgenomic RNA 2" FT /experiment="experimental evidence, no additional details FT recorded" FT CDS 3871..4440 FT /product="protein of 22 kDa" FT /db_xref="GOA:Q65015" FT /db_xref="InterPro:IPR005332" FT /db_xref="UniProtKB/TrEMBL:Q65015" FT /protein_id="CAA44358.1" FT /translation="MDTEYEQVNKPWSELYKETTLGNKLMVNVGMEDQEVPLLPSNFLT FT KVRVGLSGGYITMRRIRIKIIPLVSRKAGVSGKLYLRDISDTTGRKLHCTESLDLGREI FT RLTMQHLDFSVSTRSDVPIVFGFEELVSPFLEGRELFSISVRWQFGLSKNCYSLPQSKW FT KVMYQEDALKVLKPSKKKASRTDSSV" FT CDS 3903..4421 FT /product="protein of 19 kDA" FT /db_xref="GOA:Q65016" FT /db_xref="InterPro:IPR004905" FT /db_xref="InterPro:IPR036131" FT /db_xref="UniProtKB/TrEMBL:Q65016" FT /protein_id="CAA44359.1" FT /translation="MERVIQGNDAREQANGERWDGGSGGTTSPFKLPDESPSWTEWRIH FT NDETDSNKDNPLGFKESWGFGKVVFKRYLRYDRTETSLHRVLGSWTGDSVNYAASRFLG FT VNQIGCTYSIRFRGVSVTISGGSRTLQHLCEMAIRSKQELLQLAPVEVESNVSRGRPEG FT AEAFKEESE" XX SQ Sequence 4789 BP; 1234 A; 981 C; 1326 G; 1247 T; 1 other; naaattctcc aggatttctc gacctcggtt gttttatctg gtagtttgcg ctaatcttcg 60 ctttgcgtag ggaatttctc tccttaatac atttctgagt taaggggttt gaaggttggg 120 tctatctttt gagtttatct cactagagga taaattgtaa cttccaacaa ataagcgata 180 tggagaccat caagagctgg atttgtccta agaaagagat ttttgtaggg gattttgcga 240 tcggagtgaa taggaaggtt ccggtggaca tctttcagtt ggtgtgtcgt gtggttctga 300 gatacatgag gacagggaaa atagagtgcg attctgacag catgactaag tttttggtag 360 agttacttaa aaccgattgt gctgctaaat gggagtggtt catgaagaga cggcagagag 420 gtgattatgt catccctcta tctatagctg ctctcccaat cgtgccgctg ttgagttatg 480 ccactagggc acgcgcagtc tcagtcaagg cattcggcaa tgagctatcg ctcaatgttc 540 gcgtgcctag accttctgtg cctaagaaag gcctactcct cagactggcg gcaggtctag 600 cgttagctcc tatatgcgcg ctggccatgt acgctaccct acccagggaa aaactgtctg 660 tattcaagct gagaactgag gcacgtgcac atatggaaga tgagagagaa gcaacggatt 720 gcttggtggt tgagcccgct cgtgagctca aagggaagga tggtgaggat ctactcactg 780 gtagtaggat gacgaaggtg gtagcatcca caggacgtcc tcggaggaga ccgtatgccg 840 caaaaattgc gcaggtcgcg agggccaaag tgggctatct taagaatagc cccgagaata 900 ggcttatcta ccagagagtg atgatcgaga taatggacaa ggactgcgtc aggtatgttg 960 acagggatgt catattgcca ttggctattg gatgctgttt tgtctatccg gacggagttg 1020 aggagtcggc tgcactatgg ggttcccagg aatcccttgg tgtgaaatag ggaggcctag 1080 tacgtctacc tggggttgta acacagatca atcgagatat cccatctggt gtgttgcttc 1140 cccaggaggt gctagaggtt cgtgcaggac ctcccaatgc taaggaccgt aatatatata 1200 tggttgcagg ttgcccatca caggcacggt tcttagtgca taatcactgc ctgaaaaacc 1260 ttaaaagggg tcttgtggag agagttttct gcgttgagag aaacgggaga cttactcgca 1320 ctccacaacc taccaaagga tcctttggac gtctttcccc gttcaggaaa gcggtttgtg 1380 agaaggttgg agttgcccac cggttggggt atgacggttt cctgtcatac tacagcggcg 1440 cgaagctccg tacttacaca cgagctgtgg agagtctgca tattactcct gtctctgaga 1500 gagatagtca tttgactacc tttgtcaagg ctgagaaaat atcgacgtct aagggtgacc 1560 cagctcctag ggtgattcag cctcgaaacc ctaggtacaa tgtggaactt ggaagatatc 1620 tacggcatat ggaatccaag ctgatgaaag ctgtcgatgg cgttttcggt gagacaacgt 1680 gcatcaaagg atatactgca gatgaggtgg gtgcaatttt tcgggagaag tgggataggt 1740 ttgataaacc cgtcgccatt ggtcttgatg cgtccaggtt tgatcaacac tgttccgttg 1800 aggctttgca atatgagcat agcttctaca gggccatgta ccctggcaac aagcttttga 1860 gcaagttgtt ggaatggcaa ctccataata aaggtaaggg ttatgtccct gatgggacta 1920 taacttatcg taaggagggg tgccgtatga gtggggatat caatacttca ttgggcaact 1980 atctgttgat gtgcgctatg atacacgggt acatgcgcca tttgggaatt aatgaattta 2040 gtctggcaaa ctgcggggat gactgcgttc taattgtgga gcggaggaat cttaagcaga 2100 tacagaggac cctacctgag tatttcctaa atttagggtt tacaatgaag gtggagccac 2160 ctgtgtttca attggaagag gttgaattct gccaggcaca cccagtacag tttcaaggtg 2220 gttggaagat ggtccgcaat gtccgcactg ctatgagcaa agatgtacat tgtgtcaata 2280 atatacgtga cttggccacg aggagggcct ggagtaatgc tcaacaccat ggtgggctgg 2340 cattgagtgc cggaatacct gtggttgaga aattttactc taggttcacg ttgtatgacg 2400 tgcctcgtaa acatcaacgg attgacactg taaccaatgt tcataagtgg cgtggatctg 2460 gtggtagcca tactgtgacc cctgagtcaa gggctagctt ttgggctgcc ttcggtttga 2520 cgggggatga gcagttggct ttggaggatc gtctggatag atgggagatg gatttgtttg 2580 gagaggaggg tgttgacgct catgagccca gcatccttga ctccgccgta gcttgaccaa 2640 gaacacataa aacacaggac tagcacatgg caatggtaaa gagaaataat aacactgggc 2700 ttatcccagt tagcacgaag cagttaatgg cattaggagc ggccgcaggg gcttcagccc 2760 tgcagggatt tgtaaggaac aacggggcgg ctattgtcgg aaaggtcgtc gatgttggac 2820 agaaggtgta caaagcagtg aagaagcgag gaggtaagaa acagcagcag attaagcatg 2880 taggtggtac aggtggggcc attatggccc cggttgcagt tacgagacaa cttaccggga 2940 gtaagcctaa gtttaccggt aagacgtctg ggtctgtgac ggttacgcac cgtgaatact 3000 tatcacaagt gaatatgtcc acaggtttcc aggtaaacgg gggaattgtt ggcaatttgt 3060 tacagctcaa cccgttgaat ggtactttgt tctcatggtt gcccgcgata gcgtccaact 3120 ttgatcagta ctcgttcaac agcgttttgc tacattatgt ccctctgtgc gcaaccactg 3180 aggtggggcg agtggctatg tactttgata aagattcgga agatcctgaa cctgctgata 3240 gggttgagtt ggcaaactac agcgtactag cagagacagc cccctgggct gaacgtgcgc 3300 tctgggttcc taccgatagg attaagagat tttgtgatga cagttccaca ttagatcaca 3360 aacttatcga tctaggacag ttgggcgtgg ctacatatgg tggcgctgga actaatgctg 3420 ttggggatat cttcatctcc tacagtgtta cgttatattt ccctcaacct acgaatactc 3480 tccttagcac tagaaggctc gaccttgctg gcacaccggt cacagcatcc ggacccgggt 3540 acatcctgtt aaccaggacg cccactgtac ttacaatgac atttcgtgcc actggcacgt 3600 ttgtcatctc tggagcatat cgttgtctaa cttcaacggt gctcggcctg acaggtgggg 3660 tcaacgtgaa cagcattaca gttgtggaca atgttggaac gagcagttca tttttcataa 3720 attgcactgt ctcaaaccta ccgtccgtta tcacgtttac taccactggt ataacatctg 3780 ctacgataca gtgcaatcgt gctacgcgac agaacgatgt ctctttaatt tagtgagtcc 3840 tgtgaggggc ctcttgaact agaccagttc atggatactg aatacgaaca agtcaataaa 3900 ccatggagcg agttatacaa ggaaacgacg ctagggaaca agctaatggt gaacgttggg 3960 atggaggatc aggaggtacc acttctccct tcaaacttcc tgacgaaagt ccgagttgga 4020 ctgagtggag gatacataac gatgagacgg attcgaataa agataatccc cttggtttca 4080 aggaaagctg gggtttcggg aaagttgtat ttaagagata tctcagatac gacaggacgg 4140 aaacttcatt gcacagagtc cttggatctt ggacgggaga ttcggttaac tatgcagcat 4200 ctcgatttct cggtgtcaac cagatcggat gtacctatag tattcggttt cgaggagtta 4260 gtgtcaccat ttctggaggg tcgagaactc ttcagcatct ctgtgagatg gcaattcggt 4320 ctaagcaaga actgctacag cttgccccag tcgaagtgga aagtaatgta tcaagaggac 4380 gccctgaagg tgctgaagcc ttcaaagaag aaagcgagta ggacagactc ttcagtctga 4440 ttctgtggaa atgagagtaa ttctgacata gcatacaggt tactcgtgtt gggttctaga 4500 tgttatgatg acgagctggt cgggctccgc acgggtttgg tcgcccgggg atggagatat 4560 ggaaagggtc tcgtgtgctg ttagtcagtc gaaagacgtg cttgcaacat gggcctataa 4620 ccagataagt catagcaata ctagccaaca tgaattggat tcctgtttac gaaagttagg 4680 tgtcacttgt ggagacagag ttagacacgg ttgatctcac ccttcggggg ggctatagag 4740 atcactggaa gcactaccgg acaaccggaa cattgcagca atgcagccc 4789 //