ID X60213; SV 1; circular; genomic DNA; STD; VRL; 3027 BP. XX AC X60213; XX DT 19-NOV-1992 (Rel. 34, Created) DT 22-MAR-2001 (Rel. 67, Last updated, Version 5) XX DE Duck hepatitis B virus complete genome XX KW complete genome. XX OS Duck hepatitis B virus OC Viruses; Hepadnaviridae; Avihepadnavirus. XX RN [1] RP 1-3027 RA Schneider R.; RT ; RL Submitted (26-JUN-1991) to the INSDC. RL R. Schneider, Max-Planck Inst fuer Biochemie, Am Klopferspitz 18a, 8033 RL Martinsried, FRG XX RN [2] RP 1-3027 RA Tong S., Mattes F., Blum H.E., Fernholz D., Schneider R., Will H.; RT "Complete nucleotide sequence of a chinese Hepatitis B virus"; RL Unpublished. XX DR MD5; 8ec97fdd0a1f1561f2cee44c2713b560. DR EuropePMC; PMC140978; 12525630. DR EuropePMC; PMC2620893; 19004940. DR EuropePMC; PMC548436; 15708992. DR RFAM; RF01313; AHBV_epsilon. XX FH Key Location/Qualifiers FH FT source 1..3027 FT /organism="Duck hepatitis B virus" FT /isolate="DHBVQCA34" FT /mol_type="genomic DNA" FT /db_xref="taxon:12639" FT CDS join(2524..3027,1..414) FT /product="secretory protein" FT /note="pre-C/C (core) orf" FT /db_xref="GOA:Q89860" FT /db_xref="InterPro:IPR002006" FT /db_xref="InterPro:IPR036459" FT /db_xref="UniProtKB/Swiss-Prot:Q89860" FT /protein_id="CAA42766.1" FT /translation="MWNLRITPLSFGAACQGIFTSTLLLSALTVPLVCTIVYDSCLYMD FT INASRALANVYDLPDDFFPKIDDLVRDAKDALEPYWKSDSIKKHVLIATHFVDLIEDFW FT QTTQGMHEIAESLRAVIPPTTAPVPTGYLIQHEEAEEIPLGDLFKHQEERIVSFQPDYP FT ITARIHAHLKAYAKINEESLDRARRLLWWHYNCLLWGEANVTNYISRLRTWLSTPEKYR FT GRDAPTIEAITRPIQAAQGGRKTSSGTRKPRGLEPRRRKVKTTVVYGRRRSKSRERRAP FT SPQRAGSPLPRSSSSHHRSPSPRK" FT CDS join(2653..3027,1..414) FT /product="nucleocapsid protein" FT /db_xref="GOA:Q66406" FT /db_xref="InterPro:IPR002006" FT /db_xref="InterPro:IPR036459" FT /db_xref="UniProtKB/Swiss-Prot:Q66406" FT /protein_id="CAA42774.1" FT /translation="MDINASRALANVYDLPDDFFPKIDDLVRDAKDALEPYWKSDSIKK FT HVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTAPVPTGYLIQHEEAEEIPLGDL FT FKHQEERIVSFQPDYPITARIHAHLKAYAKINEESLDRARRLLWWHYNCLLWGEANVTN FT YISRLRTWLSTPEKYRGRDAPTIEAITRPIQAAQGGRKTSSGTRKPRGLEPRRRKVKTT FT VVYGRRRSKSRERRAPSPQRAGSPLPRSSSSHHRSPSPRK" FT CDS 20..2536 FT /note="P (polymerase)orf" FT /db_xref="GOA:Q66403" FT /db_xref="InterPro:IPR000201" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR001462" FT /db_xref="UniProtKB/Swiss-Prot:Q66403" FT /protein_id="CAA42768.1" FT /translation="MQKLMRNLWIGLGDCFGGITTVYCGEKLTLLITFLGSVLGCQLRK FT STEAVMPQPLKQSLDQSKRLREAEKHLRELENLVDSNLEEEKLKPQLSMGEDVQSPGKG FT EPLHPNVRAPLSHVVRAATIDLPRLGNKLPAKHHLGKLSGLYQMKGCTFNPEWKVPDIS FT DTHFDLQVVNECPSRNWKYLTPAKFWPKSISYFPVQAGVKAKYPDNVMQHEAIVGKYLN FT RLYEAGILYKRISKHLVTFKGKPYNWELQYLVKQHQVPDGTTTSKINGRAENRRRRAPA FT KSISRPHDSERDCNMVGQISNNRSSIRPCANNGGGKHSSTTGRLACWGGKTIGTDQSYS FT SRDASASVDSRGRSKSSRGFSSISRRKATGNHHHCSYVTNSVEATTRGRSTPGKQVFTR FT DSSSLPESRASRACDKDSSPQEEENAWYLRGNTSWPNRITGKLFLVDKNSRNTTEARLV FT VDFSQFSKGKNAMRFPRYWSPNLSTLRRILPVGMPRISLDLSQAFYHLPLNPASSSRLA FT VSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARRFNVWTFTYMDDFLLCHPNARH FT LNSISHAVCSFLQELGIRINFDKTTPSPVNDIRFLGYQIDQKFMKIEESRWIELRTVIK FT KIKIGAWYDWKCIQRFVGHLNFVLPFTKGNIEMLKPMYAAITNKVNFSFSSAYRTLLYK FT LTMGVCKLAIRPKSSVPLPRVATDATPTHGAISHITGGSAVFAFSKVRDIHIQELLMVC FT LAKIMIKPRCILSDSTFVCHKRYQTLPWHFAMLAKQLLSPIQLYFVPSKYNPADGPSRH FT RPPDWTALTYTPLSKAIYIPHRLCGT" FT CDS 170..2536 FT /product="P-protein" FT /db_xref="GOA:Q66403" FT /db_xref="InterPro:IPR000201" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR001462" FT /db_xref="UniProtKB/Swiss-Prot:Q66403" FT /protein_id="CAA42769.1" FT /translation="MPQPLKQSLDQSKRLREAEKHLRELENLVDSNLEEEKLKPQLSMG FT EDVQSPGKGEPLHPNVRAPLSHVVRAATIDLPRLGNKLPAKHHLGKLSGLYQMKGCTFN FT PEWKVPDISDTHFDLQVVNECPSRNWKYLTPAKFWPKSISYFPVQAGVKAKYPDNVMQH FT EAIVGKYLNRLYEAGILYKRISKHLVTFKGKPYNWELQYLVKQHQVPDGTTTSKINGRA FT ENRRRRAPAKSISRPHDSERDCNMVGQISNNRSSIRPCANNGGGKHSSTTGRLACWGGK FT TIGTDQSYSSRDASASVDSRGRSKSSRGFSSISRRKATGNHHHCSYVTNSVEATTRGRS FT TPGKQVFTRDSSSLPESRASRACDKDSSPQEEENAWYLRGNTSWPNRITGKLFLVDKNS FT RNTTEARLVVDFSQFSKGKNAMRFPRYWSPNLSTLRRILPVGMPRISLDLSQAFYHLPL FT NPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARRFNVWTFTYMDDF FT LLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVNDIRFLGYQIDQKFMKIEESR FT WIELRTVIKKIKIGAWYDWKCIQRFVGHLNFVLPFTKGNIEMLKPMYAAITNKVNFSFS FT SAYRTLLYKLTMGVCKLAIRPKSSVPLPRVATDATPTHGAISHITGGSAVFAFSKVRDI FT HIQELLMVCLAKIMIKPRCILSDSTFVCHKRYQTLPWHFAMLAKQLLSPIQLYFVPSKY FT NPADGPSRHRPPDWTALTYTPLSKAIYIPHRLCGT" FT CDS 693..1793 FT /note="pre-S/S (surface)orf" FT /db_xref="GOA:Q66405" FT /db_xref="InterPro:IPR000349" FT /db_xref="UniProtKB/Swiss-Prot:Q66405" FT /protein_id="CAA42770.1" FT /translation="MKQESFISGYLNIWLHSKASLIIGNFNTLSSNIKFLMGQQPAKSM FT DVRRIEGGELLLNQLAGRMIPKGTVTWSGKFPTIDHLLDHVQTMEEVNTLQQQGAWPAG FT AGRRLGLTNPTPHETPQPQWTPEEDQKAREAFRRYQEERPPETTTIAPTSPTPWKLQPG FT DDPLLENKSLLETHPLYQNPEPAVPVIKTPPLKKKKMPGTFGGILAGLIGLLVSFFLLI FT KILEILRRLDWWWISLSSPKGKMQCAFQDTGAQISQHYVGSCPWGCPGFLWTYLRLFII FT FLLILLVAAGLLYLTDNMSIILEKLQWESVSVLFSSISSLLPSDQKSLVALMFGLLLIW FT MTSSSATQTLVTLTQLATLSVLFYKN" FT CDS 801..1793 FT /product="pre-S protein" FT /db_xref="GOA:Q66405" FT /db_xref="InterPro:IPR000349" FT /db_xref="UniProtKB/Swiss-Prot:Q66405" FT /protein_id="CAA42771.1" FT /translation="MGQQPAKSMDVRRIEGGELLLNQLAGRMIPKGTVTWSGKFPTIDH FT LLDHVQTMEEVNTLQQQGAWPAGAGRRLGLTNPTPHETPQPQWTPEEDQKAREAFRRYQ FT EERPPETTTIAPTSPTPWKLQPGDDPLLENKSLLETHPLYQNPEPAVPVIKTPPLKKKK FT MPGTFGGILAGLIGLLVSFFLLIKILEILRRLDWWWISLSSPKGKMQCAFQDTGAQISQ FT HYVGSCPWGCPGFLWTYLRLFIIFLLILLVAAGLLYLTDNMSIILEKLQWESVSVLFSS FT ISSLLPSDQKSLVALMFGLLLIWMTSSSATQTLVTLTQLATLSVLFYKN" FT CDS 1290..1793 FT /product="surface protein" FT /db_xref="GOA:Q66405" FT /db_xref="InterPro:IPR000349" FT /db_xref="UniProtKB/Swiss-Prot:Q66405" FT /protein_id="CAA42772.1" FT /translation="MPGTFGGILAGLIGLLVSFFLLIKILEILRRLDWWWISLSSPKGK FT MQCAFQDTGAQISQHYVGSCPWGCPGFLWTYLRLFIIFLLILLVAAGLLYLTDNMSIIL FT EKLQWESVSVLFSSISSLLPSDQKSLVALMFGLLLIWMTSSSATQTLVTLTQLATLSVL FT FYKN" XX SQ Sequence 3027 BP; 886 A; 689 C; 621 G; 831 T; 0 other; catgcacacc taaaagctta tgcaaaaatt aatgaggaat ctttggatag ggctaggaga 60 ttgctttggt ggcattacaa ctgtttactg tggggagaag ctaacgttac taattacatt 120 tctcggctcc gtacttggtt gtcaactccg gaaaagtacc gaggccgtga tgccccaacc 180 attgaagcaa tcactagacc aatccaagcg gctcagggag gcagaaaaac atcttcggga 240 actagaaaac ctcgtggact cgaacctaga agaagaaaag ttaaaaccac agttgtctat 300 gggagaagac gttcaaagtc cagggaaagg agagcccctt caccccaacg tgcgggctcc 360 cctctcccac gtagttcgag cagccaccat agatctccct cgcctaggaa ataaattacc 420 tgctaagcat cacttgggga agttgtcagg tttatatcaa atgaagggtt gtacctttaa 480 ccctgaatgg aaagtacctg atatttcgga tactcatttt gatttacaag tagtaaatga 540 gtgcccttcc cgaaattgga aatatttgac tccagccaaa ttttggccca agagcatttc 600 ctactttcct gtccaggcag gggttaaagc gaaatatcct gacaacgtga tgcagcatga 660 ggcaatagta ggtaaatatt tgaacaggct ctatgaagca ggaatccttt ataagcggat 720 atctaaacat ttggttacat tcaaaggcaa gccttataat tgggaacttc aataccttgt 780 caagcaacat caagttcctg atgggacaac aaccagcaaa atcaatggac gtgcggagaa 840 tcgaaggagg agagctcctg ctaaatcaat tagcaggccg catgattccg aaagggactg 900 taacatggtc gggcaaattt ccaacaatag atcatctatt agaccatgtg caaacaatgg 960 aggaggtaaa cactcttcaa caacagggcg cttggcctgc tggggcggga agacgattgg 1020 gactgaccaa tcctactcct cacgagacgc ctcagcctca gtggactccc gaggaagatc 1080 aaaaagctcg cgaggctttt cgtcgatatc aagaagaaag gccaccggaa accaccacca 1140 ttgctcctac gtcaccaact ccgtggaagc tacaaccagg ggacgatcca ctcctggaaa 1200 acaagtcttt actcgagact catcctcttt accagaatcc cgagccagcc gtgcctgtga 1260 taaagactcc tcccctcaag aagaagaaaa tgcctggtac cttcggggga atactagctg 1320 gcctaatcgg attactggta agctttttct tgttgataaa aattctcgaa atactacgga 1380 ggctagattg gtggtggatt tctctcagtt ctccaaaggg aaaaatgcaa tgcgctttcc 1440 aagatactgg agcccaaatc tctcaacatt acgtcggatc ctgcccgtgg ggatgcccag 1500 gatttctctg gacttatctc aggcttttta tcatcttcct cttaatcctg ctagtagcag 1560 caggcttgct gtatctgacg gacaacatgt ctattatttt agaaaagctc caatgggagt 1620 cggtctcagt ccttttctcc tccatctctt cactactgcc ctcggatcag aaatcgctcg 1680 tcgctttaat gtttggactt ttacttatat ggatgacttc ctcctctgcc acccaaacgc 1740 tcgtcacctt aactcaatta gccacgctgt ctgttctttt ctacaagaat taggaatacg 1800 cataaacttt gataagacta ctccgtctcc tgtaaatgac ataagattcc tcggttacca 1860 gattgatcag aaattcatga agatcgaaga aagcagatgg atagaactaa ggactgttat 1920 caagaaaata aaaataggtg catggtatga ctggaaatgt attcaaagat ttgttgggca 1980 tttgaacttt gtgttaccat ttactaaagg taacattgaa atgttaaaac caatgtatgc 2040 tgctattact aacaaagtta actttagctt ctcttcagct tataggactt tattgtacaa 2100 attaactatg ggtgtttgta aattagccat tcgaccaaag tcctctgtac ctttgccacg 2160 tgtagccaca gatgctactc caacacatgg cgcaatatcc catatcaccg gcgggagcgc 2220 agtgtttgct ttttcaaagg tcagggatat acatatacag gaattgctga tggtatgttt 2280 agctaagata atgattaaac ccagatgtat actctccgat tctacttttg tttgccacaa 2340 acgttatcag acgttaccat ggcattttgc tatgttggcc aaacaactgc tatctcctat 2400 acagttgtac tttgttccaa gtaaatacaa tcctgctgac ggcccatcca ggcacagacc 2460 gcctgattgg acggctctta catacacccc tctctcgaaa gcaatatata ttccacatag 2520 gctatgtgga acttaagaat tacacccctc tccttcggag ctgcctgcca aggtatcttt 2580 acgtctacat tgctgttgtc agccttgact gtacctttgg tatgtaccat tgtttatgat 2640 tcttgcttat atatggatat caatgcttct agagccttag ccaatgtata tgatctgcca 2700 gatgatttct ttccaaaaat tgatgatctt gtaagggatg ctaaagacgc tttagaacct 2760 tactggaaat ctgattcaat aaagaaacat gttttgattg caactcactt tgtggatctt 2820 attgaagact tctggcagac tactcagggt atgcatgaaa ttgctgaatc cttaagagca 2880 gtaataccac ctaccactgc tcctgtacct actggatatc tcattcaaca cgaggaggct 2940 gaagagatac ccttaggtga tttatttaaa catcaggaag aaagaatagt cagttttcaa 3000 ccagactatc ctattacagc aagaatt 3027 //