ID   X58458; SV 1; linear; genomic RNA; STD; VRL; 2114 BP.
XX
AC   X58458;
XX
DT   03-OCT-1994 (Rel. 41, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Brome mosaic virus mRNA for 3a protein and coat protein
XX
KW   3A protein; coat protein.
XX
OS   Brome mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Bromovirus.
XX
RN   [1]
RP   1-2114
RA   Mise K.;
RT   ;
RL   Submitted (26-MAR-1991) to the INSDC.
RL   K. Mise, Laboratory of Plant Physiology, Faculty of Agriculture, Kyoto
RL   University, Kitashirakawa, Sakyo-ku, Kyoto 606, Japan
XX
RN   [2]
RA   Mise K., Mori M., Nakayashiki H., Koyama T., Okuno T., Furusawa I.;
RT   "Nucleotide sequence of a set of cDNA clones derived from the brome mosaic
RT   virus ATCC66 strain and comparison with the Russian strain genome";
RL   Nippon Shokubutsu Byori Gakkaiho 60:454-462(1994).
XX
DR   MD5; 45d8449a9373417c076f98cff7526241.
DR   RFAM; RF01084; TLS-PK3.
DR   RFAM; RF01108; BMV3_UPD-PK1.
DR   RFAM; RF01113; BMV3_UPD-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2114
FT                   /organism="Brome mosaic virus"
FT                   /strain="KU1"
FT                   /isolate="RNA3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12302"
FT   modified_base   1
FT                   /mod_base=OTHER
FT                   /note="base capped by m-7Gppp"
FT   CDS             92..1003
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q65663"
FT                   /protein_id="CAA41363.1"
FT                   /translation="MSNIVSPFSGSSRTTSDVGKQAGGTSDEKLIESLFSEKAVKEIAA
FT                   ECKLGCYNYLKSNEPRNYLDLVPKSHVSAWLSWATPKYDKGELPSRGFMNVPRIVCFLV
FT                   RTTDSAESGSITVSLCDSGKAARAGVLEAIDNQEATIQLSALPALIALTPSYDCPMEVI
FT                   GGHSGRNRCFGIATQLSGVVGTTGSVAVTHAYWQANFKAKPNNYKLHGPATIMVMPFDR
FT                   LRQLDKKSLKNYIRGISNQSVDHGYLLGRPLQSVDQVAQEDLLVEESESPSALGRGVKE
FT                   SKSVSASSVAGLPVSSPTLRIK"
FT   misc_feature    1200..1220
FT                   /note="poly(A) tract including one G residue"
FT   CDS             1248..1817
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q65664"
FT                   /db_xref="InterPro:IPR002009"
FT                   /db_xref="UniProtKB/TrEMBL:Q65664"
FT                   /protein_id="CAA41364.1"
FT                   /translation="MSTSGTGKMTRAQRRAAARRNHWTARVQPVIVEPLATGQGKAVKA
FT                   IAGYSISKWEASSDAITAKATNAMSITLPHELSSEKNKELKVGRVLLWLGLLPSVAGRI
FT                   KACVAEKQAQAEAAFQVALAVADSSKEVVAAMYTDAFRGATLGDLLNLQIYLYASEAVP
FT                   AKAVVVHLEVEHVRPTFDDFFTPVYR"
XX
SQ   Sequence 2114 BP; 525 A; 472 C; 541 G; 576 T; 0 other;
     gtaaaatacc aactaattct cgttcgattc cggcgaacat tctattttac caacatcggt        60
     tttttcagta gtgatactgt ttttgttccc gatgtctaac atagtttctc ccttcagtgg       120
     ttcctcacga actacgtctg acgttggcaa gcaagcggga ggtactagcg acgagaagct       180
     cattgagtcg ctgttctctg aaaaggctgt gaaagagata gctgccgagt gtaaactcgg       240
     atgttataac tatctgaagt ctaatgaacc ccgcaactat ctagacctgg tgccaaagtc       300
     acacgtatct gcttggctct catgggctac acccaagtat gataaaggag agttaccttc       360
     caggggattc atgaacgttc cacgcatcgt ttgttttctc gttcgtacca cagatagcgc       420
     agagtccggt tctataaccg tgagcctgtg cgattctggt aaggctgctc gtgctggagt       480
     actcgaagcc attgataatc aggaggccac aattcagttg tcggctttac ctgccttgat       540
     agctttgacg cctagctatg attgtccgat ggaagtcatc ggcggtcata gcggtaggaa       600
     tcgatgtttt gggatagcaa cccaacttag cggtgtggtg gggacaacag gttccgttgc       660
     agttactcat gcttattggc aagctaattt caaagcgaag cccaacaact ataagttgca       720
     tggtcccgct acaattatgg taatgccatt tgacagactg agacaactcg ataagaaaag       780
     cctcaaaaat tacatcagag gtatttctaa ccagtctgtg gatcatgggt atcttctcgg       840
     aagaccgtta caatctgttg atcaggttgc ccaggaagat ttgttagttg aggaatccga       900
     gtctccttcc gctctcggca gaggtgtgaa ggaaagtaag tctgtatccg cgtcatctgt       960
     cgctggactt cctgtgtcca gtcctacgct tagaattaaa taggtaaatc cggtctaaca      1020
     agctcggtcc atttcgtgga gttaagcaag ctggggagac ccccgacagc cgtttggatc      1080
     agcgctcgcg tctcgtttgg gttcaattcc cttaccttac aacggcgtgt tgagataggt      1140
     cctcggggga ggttatccat gtttgtggat attctatgtt gtgtgtctga gttattatta      1200
     aaaaaaaaaa gaaaaaaaaa gatctatgtc ttaattcagc gtatttaatg tcgacttcag      1260
     gaactggtaa gatgactcgc gcgcagcgtc gagctgccgc tcgtagaaat cattggaccg      1320
     ctagggtcca accagtaatt gtcgaaccac tcgctactgg ccaaggcaag gccgttaaag      1380
     cgattgcagg atacagcata tcaaagtggg aggcgtcttc ggacgcgatt acagcgaaag      1440
     ccaccaatgc catgagtatc actctgcccc atgagctctc ttctgaaaag aataaagagc      1500
     ttaaggtcgg cagagtgctg ctttggttgg gacttcttcc tagcgttgct gggaggatta      1560
     aggcttgtgt tgctgagaaa caggcacagg ccgaggccgc ttttcaagta gccttggcgg      1620
     ttgctgactc ctcgaaagag gtggtcgcgg ccatgtatac ggacgccttt cgaggggcga      1680
     ctctggggga tttgcttaat ctccagattt atctgtatgc atctgaagca gtgcctgcta      1740
     aggcggtcgt tgtacatcta gaagttgagc acgtaaggcc tacgttcgat gacttcttca      1800
     ccccggttta taggtagtgc ccctgctcgg agagcccctg actgggttaa agttacaggc      1860
     cccttgtctc gggtagagac cctgtccagg taggacactt tggctaaggt taaaagcttg      1920
     ttgaatcagt acaataactg atagtcgtgg tttacacgca gacctcttac aagagtgtct      1980
     aggtgccttt gagagttact ctttgctctc ttcggaagaa cccttagggg ttcgtgcatg      2040
     ggcttgcata gcaagtctta gaatgcgggt accgtacagt gttgaaaaac actgtaaatc      2100
     tctaaaagag acca                                                        2114
//