ID X56492; SV 1; linear; genomic RNA; STD; VRL; 6530 BP. XX AC X56492; XX DT 23-JUL-1991 (Rel. 28, Created) DT 09-MAY-2003 (Rel. 75, Last updated, Version 6) XX DE Seoul virus 80-39 L gene for RNA-dependent RNA polymerase, genomic RNA XX KW L gene; RNA-dependent RNA polymerase. XX OS Seoul virus 80-39 OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus. XX RN [3] RP 1-6530 RA Yong Kang C.; RT ; RL Submitted (05-NOV-1990) to the INSDC. RL Yong Kang C., University of Ottawa, Dept of Microbiology & Immunology, RL Faculty of Medicine, 451 Smyth Road, Ottawa Ontario K1H 8M5, CANADA. XX RN [4] RX DOI; 10.1016/0168-1702(91)90094-C. RX PUBMED; 1840713. RA Antic D., Lim B.U., Yong Kang C.; RT "Nucleotide sequence and coding capacity of the large (L) genomic RNA RT segment of Seoul 80-39 virus, a member of the hantavirus genus"; RL Virus Res. 19(1):59-65(1991). XX DR MD5; 4aeadef48e6b07c22bf52b42b04ddd95. DR EuropePMC; PMC112616; 10364307. DR EuropePMC; PMC167242; 12885898. DR EuropePMC; PMC2725914; 17554814. DR EuropePMC; PMC3019113; 21264354. XX FH Key Location/Qualifiers FH FT source 1..6530 FT /organism="Seoul virus 80-39" FT /segment="L" FT /strain="Seoul 80-39" FT /mol_type="genomic RNA" FT /clone_lib="M13mp18" FT /clone_lib="M13mp19" FT /clone="1" FT /clone="2" FT /clone="3" FT /clone="4" FT /clone="6" FT /clone="7" FT /clone="8" FT /clone="L3'" FT /clone="L2-PL1" FT /clone="L1a-DA2" FT /db_xref="taxon:12557" FT CDS 37..6492 FT /gene="L" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:P27314" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR016268" FT /db_xref="InterPro:IPR024378" FT /db_xref="UniProtKB/Swiss-Prot:P27314" FT /protein_id="CAA39847.1" FT /translation="MEKYREIHRDLKEFTINSLTAVECMDYLDRLYAVRHDIVDQMIKH FT EWSDNKDSEEPISKVLLFAGIPNNVITALEKKVIPDHPSGKTLRSFFKMTPDNYRITGS FT LIEFVEVTVTADVDKGIREKKMKYELGLKYLEQELMTFFHRGELQNPYKITFKVVAVRT FT DGSNISTQWPSARNDGVVQYMRLVQAEISYVREHLVKTEERAALEAMFNLKFNISSLKT FT QPYFIPEYKGIDLIRPDIDGLVNYAQSWMSKTQEFSFFEVKGSAVFDCFNENEQGHIVK FT YPMSRHPRNFLLIQCTVLTAYKPATILSDQLDSRRACIQFLNLIPETPASILAHDMAHR FT YINLTRDDLLAYYAPRIQFNPTQNIKEPGTFKLTSNMMRPESKIMLDMLSQHEPRENLG FT KSIESLNISSHIVQSDCVSLITKILSDLELNISEPSSHEQITAKHTHVDTVLDKFFQNE FT TQKYLIDILKKTTAWHIGHLVRDITESLIAHSGLRRSKYWSIHAYNNGSVILFILPSKS FT LEVAGSFVRFMTAFKLGPGLVDKDNLDSILADGDILWGVSKIMSLDLNRLLALNIAFEK FT ALLATATWFQYYTEDQSQFPLQHSIRSVFAYHFLLAICQKMKLCAIFDNLRYLIPAVTS FT LYSGFPSLVEKLFERPFKSALEVYVYYNIKSLLVALAQNNKARFYSKVKLLGLTVDQST FT VGASGIYPSFMSRVVYKHYKSLISEVTTCFFLFEKGLHGNVNEEAKIHLETVEWATKFK FT EKEDKYGEMLVEHGYTIGELVESSELAVQQLYCQDAVELAANELNRVLIAKSQVVANSI FT LNKYWEEPYFSQTRNISLKGMSGQVQEDGHLSSSTTIIEAIRYLSNSRNNPNVLQLYEE FT TRHQKAQARIVRKFQRTEADRGFFITTLPTRCRLEIIEDYYDAISKNVAEEYISYGGER FT KILCIQAALEKALRWASGESFIELSNGKFIRMKRKLMYVSADATKWSPGDNSAKFRRFT FT AALHNGLPDDRLKNCVIDALRHVYKTDFYMSRKLRHYIDSMDTYEPHVRDFLNFFPDGH FT HGEVRGNWLQGNLNKCSSLFGVAMSLLFKEIWTRLFPELDCFFEFAHHSDDALFIYGYL FT EPADDGTDWFLFVSQQIQAGKLHWFNVNTEMWKSMFNLHEHILLLGSIKISPKKTTLSP FT TNAEFLSTFFEGCAVSIPFIKILLGSLSDLPGLGYFDDLAAAQTRCVKAMDLGASPQIS FT QLAVSLSTSKVERLYGTSIGMVNYPGTYLRTKHSETPIPLGGSGAMSIMELSTAGIGMS FT DKNLLKQALIGYMHKHQKQMSYILGLFKFLMDLSGETFQHERLGQFSFIGKVQWKIFTP FT KSEFEFSDMYSQKFLKVWSEQHPTYDYIIPKGRDNLLIYLVRKLNDPSIITAMTMQSPL FT QLRFRMQAKQHMKVCRLDGDWVTFREVLAAANSFAESYEPSQNDIDLFQTLTSCTFSKE FT YAWKDFLNNVHCDVIPTKQVQRAKVARTFTVREKDRIIQNSIPAVIGYKFAVTVDEMSD FT VLDTAKFPDSLAVDLKTMKDGVYRELGLDISSPDVMKKVAPMLYKSAKSRVVIVQGNVE FT GTAEAICAYWLRNMSLIKTIKVKPHKEVLQAVSIFNRKEDIGQQKDLSALKLCIEVWRW FT AKANNAPYRDWFHALWFEDKTFSEWLDRFIRVGVPPIDPEIQCAALMIADVKGDRSVLQ FT LQANRRAYSGKQYDAYCVQTYNEETKLYEGDLRVTFNFGLDCARLEIFWDKKTYILETS FT ITQKHVLKIMMEEVSKELVRCGMRFNTEQVNGVKHLVLFKTDSGFEWGKPNIPCIVYKN FT CALRTGLRTNQAINHKFMITIKDDGLRAIAQYDEDSPRFLLAHAFHTIRDVRYQAVDAV FT SNVWFTHKGIKLYLNPIISSGLLEYFMKNIPAAIPPAAYSLIMNRAKISVDLFMFNDLL FT RLINPGNTLDLSGLEITGEGYSTVNSLSSRLWSEEMSLVDDEEEMDDEFTIDLQDVDFE FT NIDIEADVEHFLQDESAYTGDLLIMSEETEVKKMRGIIKLLEPVKLIKSWVSRGLSIEK FT VYNPVNIILMTRYISKNFNFSGKQVSLLDPYDLTELESIVKGWGESVVDQFDSLDLEAQ FT NLVQKQGIVPEDVIPDSLFSFRHTMVLLRRLFGQDSVSTFY" XX SQ Sequence 6530 BP; 2126 A; 1072 C; 1380 G; 1952 T; 0 other; tagtagtaga ctccggaaga gacaaatcaa aaaaagatgg agaaatatag agaaatacac 60 agggatctga aggagtttac tattaactca ttaacagccg tggaatgcat ggattacttg 120 gataggctct atgctgtccg gcatgacatt gttgaccaga tgataaaaca tgaatggtca 180 gacaataaag acagcgagga gccaataagt aaggtattgc tgtttgctgg gatacctaat 240 aatgtcataa cagcattgga aaaaaaggtt atccctgatc atccaagtgg taaaacactg 300 cggtcttttt ttaagatgac acctgacaac tatcgaataa caggttcctt aatcgagttt 360 gtggaggtaa ctgtgactgc agatgtagat aagggtatca gagagaagaa aatgaaatat 420 gagctaggtc tgaaatatct agagcaagaa ctcatgacat tttttcatag gggagaacta 480 caaaaccctt ataaaattac atttaaagta gttgcagtcc ggacagatgg atcaaatatt 540 tcaacacaat ggcccagtgc aaggaatgat ggtgtcgttc aatacatgag attggtacag 600 gcagaaatca gttatgtaag ggaacatttg gttaaaactg aagaaagagc tgcattagaa 660 gcaatgttta acttgaaatt caacataagt tctctaaaga cacagcctta ttttatccct 720 gaatataaag ggattgatct gattagacct gatatagatg ggttagtgaa ctatgcccaa 780 agctggatgt caaagaccca agaattctct ttctttgaag taaaaggttc agctgtgttt 840 gattgtttta atgagaatga acaagggcac attgtaaaat acccaatgtc ccggcacccg 900 aggaactttt tactcatcca atgcactgta ttaacagcat acaaacctgc aactatactt 960 tctgatcagc ttgatagccg tagggcctgc attcaatttt taaacctcat cccagaaacc 1020 cctgcatcta ttcttgcaca tgatatggca cacagataca tcaatttgac tagagatgat 1080 ttattagcat attatgcacc tagaatccaa tttaacccaa cccaaaatat taaagaacca 1140 ggcaccttta aattaacatc aaatatgatg aggcctgagt caaagattat gctggatatg 1200 ctaagtcaac atgaacctcg agaaaatctg gggaagtcaa tagaaagttt aaacatcagt 1260 agtcatattg tacagtcaga ttgtgttagc ctaatcacaa aaattttgtc agatttagag 1320 cttaatattt ctgaacctag tagccatgag cagattacag ctaaacacac acatgttgat 1380 actgtattgg ataaattttt tcaaaacgag actcagaagt atctaattga tattctaaag 1440 aagaccacag catggcatat cgggcattta gttagggata ttactgagag cttgattgca 1500 cattctggat tgaggaggtc taaatattgg tcaatccatg cttataataa tggaagtgta 1560 atattgttca tactcccttc aaaatctctt gaggttgcag gttcgtttgt gcgatttatg 1620 actgctttta aattaggtcc tgggctagtt gataaagaca atttggattc aatacttgca 1680 gatggtgata tcttatgggg agtctcaaaa attatgagtc tagatctgaa caggttactt 1740 gctttgaata tagcttttga gaaagcacta cttgcaacag ctacatggtt ccaatattac 1800 actgaggatc agtcacaatt tccattgcaa cattctatcc ggtcagtatt tgcttatcat 1860 tttttgcttg ctatttgcca aaagatgaaa ttatgtgcaa tctttgacaa cctaaggtat 1920 ctgatacctg ctgtgacatc tttgtattct ggctttcctt ctttggttga aaaactgttt 1980 gagagacctt ttaaaagtgc tttagaagtc tatgtgtatt ataacatcaa aagtctgctt 2040 gtcgcactgg ctcaaaataa taaggctaga ttttattcga aagttaaact tctcggattg 2100 actgttgacc aatctacagt tggtgcaagc ggtatctatc catcctttat gtcacgagtt 2160 gtttataaac attataagag tttaatttca gaagtgacaa cttgcttttt tctttttgaa 2220 aagggtttgc atgggaatgt gaatgaagag gctaaaatac atctggaaac tgtggaatgg 2280 gcaacaaagt tcaaagaaaa ggaggataag tatggtgaga tgttagttga acatggttat 2340 acaataggag agcttgtaga atccagtgaa ctagcagtcc aacaactata ttgtcaagat 2400 gcagttgagc tggctgccaa tgaattgaac cgagttctta tcgcaaagtc tcaggtggtt 2460 gctaatagta tcttaaataa gtattgggaa gagccatatt ttagccaaac aaggaatatt 2520 agtttaaaag gcatgtcagg ccaagtacaa gaggatggac atttgtcgtc atccactaca 2580 ataattgaag ctataagata tctgtctaat tcaaggaaca atcctaacgt tcttcaacta 2640 tatgaagaaa ctagacatca gaaggcacaa gctagaattg tgaggaagtt tcagaggaca 2700 gaagctgatc gaggtttttt cattacgaca ctaccaacaa gatgtcgtct tgagattatt 2760 gaggactatt atgatgcaat atcaaaaaac gtagcagagg aatatatctc atatggtgga 2820 gaaaggaaaa ttctctgtat ccaggcggcc cttgaaaaag ctctccgctg ggcatctgga 2880 gagagcttta ttgagctcag caacgggaaa tttataagga tgaagagaaa acttatgtat 2940 gtcagtgctg atgccactaa atggtctcca ggtgataatt cagcaaaatt caggcgattc 3000 actgctgccc ttcataatgg actgcctgat gacaggttga aaaactgtgt cattgatgcc 3060 ttgcgccatg tatataagac tgacttttat atgtctagaa aacttagaca ctatattgat 3120 tctatggata cttatgaacc tcatgtcaga gactttttaa atttctttcc agacgggcat 3180 catggagagg tacgaggcaa ttggttgcag ggtaacttga acaagtgttc atcattgttt 3240 ggtgtggcaa tgtccttatt atttaaagaa atttggacaa ggttatttcc agaattagac 3300 tgcttttttg aatttgctca tcattcagat gatgcacttt tcatatatgg ctacttagaa 3360 ccagctgatg acgggactga ttggttctta tttgtatccc agcagattca agccggaaaa 3420 ttgcattggt ttaatgtaaa tacagagatg tggaaaagta tgtttaatct gcatgaacac 3480 attcttctgt taggatcaat taaaatatcc ccaaagaaga caacattatc gccgacaaat 3540 gctgagtttt tgtctacatt ttttgagggt tgtgctgtat caattccctt tattaaaatc 3600 cttcttggct cactatctga cctaccaggt cttggctatt tcgatgatct tgctgctgcc 3660 cagacgaggt gcgtcaaagc aatggattta ggagcatcac ctcaaatctc acaacttgca 3720 gtctcactta gtacgagtaa ggttgagaga ttatatggga catcaatagg catggttaat 3780 tatcctggca catatttaag gacaaaacac tctgaaactc caattccact gggaggaagt 3840 ggtgcaatgt caataatgga actttcaaca gccggtatag gtatgtctga caaaaattta 3900 ctgaaacaag cacttattgg ttatatgcat aaacaccaaa agcaaatgag ttacatcttg 3960 gggctcttca agtttttaat ggatctctct ggtgagacat ttcagcatga aaggctaggc 4020 cagttttcat ttataggaaa agttcaatgg aagatattca cacccaaatc agagtttgaa 4080 ttctctgaca tgtattctca gaagttttta aaggtttgga gtgaacagca tcctacatat 4140 gattacatta ttcctaaagg tcgtgataat cttcttattt atcttgtgag aaaattgaat 4200 gacccaagca ttataacagc tatgactatg caatcacctt tacaactcag atttaggatg 4260 caagcaaaac aacatatgaa ggtttgcaga ctagatgggg actgggtaac atttagagag 4320 gtacttgcag cagcaaacag ttttgctgag agctatgaac ctagtcaaaa tgatattgat 4380 ttatttcaaa cattgactag ctgcacattt tctaaagagt atgcatggaa agattttttg 4440 aataatgtac actgtgatgt gataccaaca aagcaagtac aacgtgcaaa agttgcacgt 4500 acattcacag tgagagaaaa ggaccgaatt attcaaaaca gcattccagc tgttattggt 4560 tacaagtttg cagtaacagt tgatgaaatg tctgatgtgc tagacacagc aaagttccca 4620 gattctctgg cagttgacct aaagacaatg aaagatggag tctataggga attgggttta 4680 gatatctctt ccccagatgt tatgaagaaa gtggcaccta tgttgtataa gagtgcaaaa 4740 tcacgggttg tcattgtcca ggggaatgtg gaaggaactg cagaggcaat ctgtgcatac 4800 tggttaagga atatgtcatt gattaagaca attaaagtta aaccccataa agaagtgctc 4860 caggctgtat ccatatttaa tagaaaagaa gatatcggtc aacagaagga tttgtcagca 4920 ctaaagttat gtattgaagt ttggaggtgg gcaaaagcaa ataatgcacc atatagggac 4980 tggttccatg cattatggtt tgaagacaaa acattttcag agtggctaga tagatttatc 5040 agagtaggtg tgcctcctat tgatccagaa attcagtgtg cagcattgat gattgcagat 5100 gtcaaaggtg acaggtcagt gttacaactc caagccaata gaagagcata ttcagggaaa 5160 caatatgatg catattgtgt acagacttat aatgaagaga caaagcttta tgaaggggat 5220 ctaagagtaa ccttcaattt tggattagat tgtgcacggc ttgagatatt ttgggataaa 5280 aaaacttata ttcttgagac atccatcaca cagaaacatg ttttaaaaat catgatggag 5340 gaggtttcga aagagctagt taggtgtggg atgcgattta atactgagca agttaatggt 5400 gtaaagcacc ttgtgttgtt caagacggat tcaggttttg aatggggtaa gcctaatatt 5460 ccatgtattg tatacaaaaa ctgtgcattg aggacaggct tgaggacaaa ccaggctatc 5520 aaccataagt ttatgatcac aattaaggat gatggtctca gggcaattgc acagtatgat 5580 gaagatagcc cacggtttct tttagcacat gctttccata ctatccgtga tgttcgctat 5640 caagcagttg atgcagtaag taatgtgtgg ttcacacata aggggataaa gctatacttg 5700 aacccgatca tttcatcagg actgctagag tactttatga aaaatatacc tgctgctatt 5760 ccaccagctg cttattcatt aataatgaat cgtgcaaaaa tttctgtgga cctttttatg 5820 tttaatgact tacttagact aataaaccca ggtaacacac ttgacttgtc tggtcttgaa 5880 ataacaggtg agggttatag tacagtaaat agtctttcta gtagattatg gtcagaagaa 5940 atgagccttg ttgatgatga agaggagatg gatgatgagt tcacaataga cctacaggat 6000 gtagattttg aaaatattga tatagaagct gatgtagagc atttcttaca ggatgagagt 6060 gcttatacag gtgatctatt gattatgtca gaagaaacag aagtaaaaaa gatgagaggg 6120 ataattaagc ttttagaacc tgtaaagtta ataaagagct gggtttcaag gggattgtct 6180 attgaaaagg tatacaaccc agttaacatc atactaatga ctaggtatat atcaaaaaac 6240 tttaactttt caggcaagca ggtatcctta ttagacccat atgatttaac tgagcttgag 6300 agtattgtta agggatgggg tgagtctgtt gtggatcagt ttgattccct tgacttagaa 6360 gcccagaatc tagttcaaaa gcagggtatt gtacctgagg atgtgattcc agactcgttg 6420 ttttccttta gacatactat ggtcctatta cgccggctgt ttggacagga ttcagtttct 6480 acattctatt aatcattcac ttcattttca ttttgcggag tctactacta 6530 //