ID X56258; SV 1; linear; mRNA; STD; VRL; 4773 BP. XX AC X56258; XX DT 23-AUG-1991 (Rel. 29, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Plum Pox Virus partial genome polyprotein mRNA for CI, 6K, NIa, NIb and DE coat protein genes XX KW 6K gene; cI gene; coat protein; nia gene; NIb gene. XX OS Plum pox virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4773 RA Candresse T.; RT ; RL Submitted (07-DEC-1990) to the INSDC. RL Candresse T., INRA, Station de Pathologie Vegetale, BP 81, 33883 Villenave RL d'Ornon Cedex, France. XX RN [2] RX PUBMED; 1856701. RA Wetzel T., Candresse T., Ravelonandro M., Delbos R.P., Mazyad H., RA Aboul-Ata A.E., Dunez J.; RT "Nucleotide sequence of the 3' terminal region of the RNA from an atypical RT strain (El Amar) of plum pox potyvirus"; RL J. Gen. Virol. 72:1741-1746(1991). XX DR MD5; d4e0d20751961f7e1d491bb983b96343. XX FH Key Location/Qualifiers FH FT source 1..4773 FT /organism="Plum pox virus" FT /strain="El Amar" FT /mol_type="mRNA" FT /db_xref="taxon:12211" FT CDS <1..4557 FT /codon_start=1 FT /gene="genome polyprotein" FT /db_xref="GOA:Q01681" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="UniProtKB/Swiss-Prot:Q01681" FT /protein_id="CAA39698.1" FT /translation="LNKLAIPNANVCGWMSVRDYKRQGCNLDLDDNIRVPFYVKDLPET FT LHEKIWQTVEAHKADAGFGRICSSSACKIAYTLQTDIHSIPRTVKILDALLEQERTKQA FT HFRSMTSQSCSSSNFSLSSITSAIRSKYAKDHTEENIGVLQMAKAQLLEFKNLNIDPSY FT PELVRNFGALECVHHQTKEGVSKALRLKGHWNKQLVTRDATLMLGVLGGGAWMIFSYLR FT DSFKEEVVHQGFNRRQRQKLKFRQARDNRMAREVYGDDSTMEDYFGSAYSKKGKSKGRT FT RGMGTKTRKFVNMYGYDPTDYNFVRFVDPLTGHTLDENPLMDINLVQEHFSQVRNDYLG FT DDKITMQHIMSNPGIVAYYIKDATQKALKVDLTPHNPLRVCDKTATIAGFPEREFELRQ FT TGQPVLVEPNAIPQINEEGDEEVGHESKSLFRGLRDYNPIASSICHLTNASGTRQSEIY FT GLGFGGLIVTNQHLFKRNDGELTIRSHHGEFVVKDTKTLKLLPCKGRDIIIIRLPKDFP FT PFPRRLQFRTPTAEDRVCLIGSNFQTKSVSSTMSETSATYPVDNSHFWKHWISTKDGHC FT GLPIVSTRDGSILGLHSLANSTNTQNFYAAFPDNFETTYLANQDNDNWIKQWRYNPDEV FT CWGSLQLKRDVPQSPFTICKLLTDLDGEFVYNQAKTTHWLRDKLEGNLKAVGACPGQLV FT TKHVVKGKCTLFETYLLTHPEEREFFQPLMGAYQKSALNKDAYVKDLMKYSKSIVVGAV FT DCEQFERAVDVVISMLISKGFSECSYVTDPEEIFSALNMKAAVGALYSGKKRDYFKDTS FT ELEKEEFVRASCKRLFMGKKGVWNGSLKAELRPKEKVEANKTRSFTAAPIDTLLGGKVC FT VDDFNNQFYSLNLHCPWSVGMTKFRGGWDKLLRALPDGWIYCDADGSQFDSSLSPYLIN FT AVLNIRLAFMEEWDIGEQMLSNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTL FT MVILAMTYSLLKLGYHPDTHECICRYFVNGDDLVLAVHPAYESIYDELQHHFSQLGLNY FT TFTTKTENKEDLWFMSHKGIMCEGMYIPKLEPERIVSILEWDRSSEPIHRLEAICASMV FT EAWGYKELLREIRKFYSWVLEQAPYNALSKDGKAPYIAETALKKLYTDTEASETEIERY FT LEAFYSNLTDEDESNVVVHQADEKEDDEEEVDAGRPLVTTTQQPIVTTTTQQTPITSTT FT LQATQAMFNPIFTPATTEPTTRTVPHTTTTTPPSFGVIGNEDTAPNASNAVVRTGRDRD FT VDAGSIGTFTVPRLKAMTSKLSLPKVKGKAIMNLNHLAFYSPAQVDLSNTRAPQSCFQT FT WYEGVRRDYDVTDDEMSIILNGLMVWCIENGTSPNINGMWVMMDGETQVEYPIKPLLDH FT AKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTP FT VRAREAHIQMKAAALRNAQNRLFGLDGNVGTQEEDTERHTAGDVNRNMHNLLGMRGV" FT mRNA 1..4773 FT /gene="genome polyprotein" FT /experiment="experimental evidence, no additional details FT recorded" FT mat_peptide <1..537 FT /product="CI protein" FT mat_peptide 538..696 FT /product="6K protein" FT mat_peptide 697..2004 FT /product="NIa protein" FT mat_peptide 2005..3558 FT /product="NIb protein" FT mat_peptide 3559..4554 FT /product="coat protein" FT polyA_site 4773 XX SQ Sequence 4773 BP; 1449 A; 982 C; 1128 G; 1214 T; 0 other; ctgaacaagt tagcaattcc aaacgctaac gtctgtggtt ggatgagtgt tcgtgactac 60 aagcggcaag gttgcaattt ggacctggat gacaacataa gagtgccttt ttacgtcaaa 120 gatcttcctg agactttgca tgagaaaata tggcaaacag tcgaagctca caaggcagat 180 gcaggtttcg ggcgtatctg cagctcaagt gcatgcaaaa tagcgtacac actacagaca 240 gacatccatt ccatcccacg tactgtcaag attctcgatg cgcttttgga gcaagaacgg 300 acaaaacagg cacacttccg gtctatgacg agtcaatcct gctcaagctc aaatttttca 360 ctctctagca tcacctcagc cattcgctca aagtatgcga aggatcatac agaagaaaac 420 attggcgtcc ttcaaatggc aaaggcccaa ctgttggaat tcaagaactt aaatattgat 480 cctagctacc cagaacttgt gcgaaacttt ggagcattgg agtgcgtgca tcaccagaca 540 aaggaaggag tctcaaaagc acttcgattg aaagggcatt ggaacaagca actagtcaca 600 cgagatgcta cgttaatgct cggcgtcctt ggtggtggag cttggatgat ttttagttac 660 ttgcgggata gctttaaaga ggaagtagtc catcaaggat tcaaccgtag acagaggcaa 720 aagctcaaat ttagacaggc ccgcgataac aggatggcca gggaagttta cggtgatgat 780 tccacaatgg aagattactt tgggtctgct tactcaaaga agggaaagag taaagggaga 840 accaggggta tgggcacaaa aacaaggaag tttgtgaaca tgtacgggta tgatccaact 900 gattataact ttgttcgatt tgttgatcct ttaactggac atactttgga cgaaaaccca 960 ctcatggaca taaaccttgt gcaggagcat ttttcacaag ttcgcaacga ctatcttggt 1020 gatgacaaaa taacaatgca acatataatg tcaaaccctg gtatagttgc atactacatt 1080 aaggatgcga ctcagaaggc tctcaaggtt gacttgaccc cgcacaaccc attgcgtgtc 1140 tgtgataaaa cggcaacaat tgctggtttc ccagaaaggg agtttgaact gagacagaca 1200 gggcaaccag ttttggttga acccaacgcg attccgcaga taaatgaaga aggggacgaa 1260 gaagttggac acgaaagtaa gtcattgttc agaggactcc gggactacaa tccaattgcc 1320 agttcgatat gccatctgac caatgcatct ggaacacgac aaagtgaaat ctatggactt 1380 gggtttggag gtcttattgt cacgaaccag caccttttca aaaggaatga tggcgagctc 1440 acaattcgat cacaccatgg cgaatttgtg gtgaaagata ctaaaactct gaagttgtta 1500 ccatgcaaag gtcgtgatat cataatcatc aggctaccga aggattttcc cccattccca 1560 agaagactcc aatttagaac tcctacagct gaagatcgtg tctgtttgat tggttcaaat 1620 ttccaaacaa agagtgtgtc aagtacaatg tcagaaacaa gtgccacata cccagttgat 1680 aatagtcact tttggaaaca ctggattagc acaaaggatg gtcattgtgg gttaccaatc 1740 gtcagcacaa gagatggaag tatccttggg ttgcacagtt tagcaaactc aacaaacacc 1800 cagaacttct atgcagcatt tcctgacaac tttgagacaa cctacttggc aaatcaggat 1860 aatgacaact ggatcaagca atggcgctac aatcctgatg aagtgtgctg gggctctctg 1920 caactaaaga gggacgttcc acaaagtccc ttcaccattt gtaaattatt gacagatctt 1980 gatggtgagt ttgtatacaa tcaagccaag acgacacact ggcttcggga caaattggag 2040 gggaacttga aagcagtggg tgcctgccca ggacagctgg tcactaaaca tgtagtgaag 2100 ggtaagtgca cactgtttga gacgtacttg ctcacacacc cagaggaacg agaattcttt 2160 caacctttga tgggagctta tcagaagagt gccttaaaca aggatgctta cgtcaaggat 2220 ttgatgaagt attctaaatc cattgtggtc ggtgctgttg attgtgagca atttgagcgt 2280 gccgtcgatg ttgtcatttc aatgcttata tcgaaaggtt ttagcgaatg cagctatgtc 2340 actgatccgg aagagatttt ctcagcacta aacatgaaag ccgcagttgg ggctctgtat 2400 agtggcaaaa agcgagatta tttcaaggac acatcggagt tagaaaagga ggagtttgtg 2460 cgagccagtt gcaaacgatt gttcatggga aagaaaggtg tctggaatgg ttccctgaaa 2520 gctgagttgc gaccaaagga gaaagttgaa gcaaataaga cgcgctcatt tacggcagca 2580 ccaatagaca ctctcttagg gggcaaggta tgtgtggatg atttcaacaa tcagttttac 2640 agcttgaatc ttcattgccc ttggagcgtt ggtatgacaa agtttagagg tggatgggac 2700 aagctcctga gagcattgcc tgatggatgg atttattgtg atgctgatgg atctcagttt 2760 gatagttctc tgtctccata tctgatcaat gcagttctga acattcgact agccttcatg 2820 gaagaatggg atattggtga acaaatgctt tctaacttat acactgagat tgtttacaca 2880 ccaattgcaa caccagacgg cactatagtg aaaaagttta aaggaaacaa tagtggtcag 2940 ccttcgacag tcgttgacaa cacacttatg gtgatattgg ctatgacata ctcattactc 3000 aagctcggct atcatccaga tactcatgaa tgtatttgtc gctactttgt caatggtgat 3060 gatcttgtcc ttgctgtaca ccctgcttat gaaagcatat atgatgaact tcagcatcat 3120 ttctctcaac ttggactgaa ttatacattc accacaaaga cggagaacaa ggaagatctc 3180 tggttcatgt ctcataaagg catcatgtgc gaaggcatgt acatacccaa attggagcct 3240 gaaagaattg tgtcaatcct tgaatgggac agatcaagtg agccaattca cagacttgag 3300 gctatttgtg catcaatggt tgaagcttgg ggttacaaag aactgttaag ggagatccga 3360 aaattctata gctgggttct tgagcaggca ccatacaatg ccctgtcgaa ggatggcaaa 3420 gcaccataca ttgcagagac agcactgaaa aagttataca ctgacactga ggcgtctgag 3480 actgagattg agaggtatct tgaagcattc tacagtaacc tcacagatga agatgaatcc 3540 aatgtagttg tccatcaagc tgatgagaag gaagacgatg aagaggaagt ggatgcaggg 3600 aggcctttag tcaccactac acagcagcca attgttacca caacaactca gcaaactcca 3660 ataacgagta caaccttaca agctacgcag gcaatgttta atcccatctt cactccagcg 3720 acgactgagc cgaccactag gacagtgcct cacacaacaa ctactacacc tccttctttt 3780 ggagtgatcg ggaatgagga taccgcaccc aatgcttcca atgcagtagt tcgaacaggt 3840 agagacagag atgttgatgc gggttccatt gggactttca cagtgccacg cttgaaagca 3900 atgacatcaa agctctcact tccaaaggtg aaagggaaag caattatgaa tttgaatcac 3960 ctggctttct acagtcctgc acaagtggat ttgtcgaaca cgcgagctcc acagtcctgc 4020 tttcaaacat ggtatgaagg agttagacgc gactatgacg tcactgatga tgaaatgagc 4080 attattttga atgggcttat ggtctggtgc attgagaatg gaacatcccc gaatattaat 4140 ggaatgtggg tcatgatgga cggggagaca caagtggagt atccaataaa gccattgttg 4200 gatcatgcga aacccacttt tagacaaatt atggcacatt tcagtaacgt ggctgaagcg 4260 tatattgaaa aacggaatta tgagaaagca tacatgccaa ggtatggtat tcagcgcaac 4320 ctgacggatt acagcctcgc cagatacgcc tttgattttt acgaaatgac ttcaacgaca 4380 cctgtgcgtg cacgtgaagc tcatatacag atgaaggcag cggcattgag aaatgcccag 4440 aatcgtttat ttggcttgga tggaaatgtt ggaacacaag aagaggacac agagaggcac 4500 accgctggtg atgttaatcg caacatgcat aacctcctcg gtatgagggg agtgtagtgg 4560 tctcggtatc tatcataaac tctactcggg tgagagtcta gtcatccgac tgttttagat 4620 tcctgttagc atccttttct ccgctttaat agcggtacat tcagtgaggt tcaacctcca 4680 tatgtgctag tctgttattg tcaaacacag gcccttgtat ctgatgtagc gagtgcttca 4740 ctccattcgg gttatagttc ttgtgcaaga gac 4773 //