ID X55701; SV 1; linear; genomic RNA; STD; VRL; 2193 BP. XX AC X55701; XX DT 19-MAR-1991 (Rel. 27, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 4) XX DE Maize rough dwarf virus ORF1 and ORF2 RNA for hypothetical proteins XX KW ORF1; ORF2. XX OS Maize rough dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-2193 RA Nuss D.L.; RT ; RL Submitted (12-SEP-1990) to the INSDC. RL Nuss D.L., Roche Institute of Molecular Biology, Dept. of Molecular RL Oncology & Virology, Nutley NJ 07110, USA. XX RN [2] RP 1-2193 RX DOI; 10.1016/0042-6822(91)90065-J. RX PUBMED; 1989382. RA Marzachi C., Boccardo G., Nuss D.L.; RT "Cloning of the maize rough dwarf virus genome: molecular confirmation of RT the plant-reovirus classification scheme and identification of two large RT nonoverlapping coding domains within a single genomic segment"; RL Virology 180(2):518-526(1991). XX DR MD5; 4db99f40e860f04ee5ede06a66bc20b0. XX FH Key Location/Qualifiers FH FT source 1..2193 FT /organism="Maize rough dwarf virus" FT /segment="S6" FT /mol_type="genomic RNA" FT /db_xref="taxon:10989" FT misc_feature 1..9 FT /note="terminal conserved sequence" FT repeat_region 8..16 FT /rpt_type=INVERTED FT /note="terminal" FT CDS 42..1130 FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="InterPro:IPR010521" FT /db_xref="UniProtKB/Swiss-Prot:P22119" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAA39227.1" FT /translation="MDRPAREHLKFSKANTKNEIREMRIYKDDTADGLCFSEINVGCTS FT TTPKMSLSDYFSSVSCSFDGEMRIPDIPLKMYGDLHFHEQFTNDVDLDLLCWQLLSSNQ FT DSRALCVNILRMVTSLSLGNAFISEGRYHYAIDTTEQTSAEDSDALRFLARIAKIVIKN FT DVDKSDVVAAQQTLIYYYFGNSYQGIHLNWDSKSSQQSIHGYSTSEVCLDHYIRMKVDL FT FHGLRSKNLVYGGNYQLVYQALFYYYVITNGRFSSGFNVRKDSIKSYFVPNDDPSMCNV FT SPRKPSLSLMFIRAVLITILIKDYSPVKEIPKYLRQLEVENPLTNSCLITDNGLRSEVP FT MNAAAPSAPTPTELPVFSPPSS" FT CDS 1183..2112 FT /product="hypothetical protein" FT /note="ORF2" FT /db_xref="InterPro:IPR009519" FT /db_xref="UniProtKB/Swiss-Prot:P22120" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAA39228.1" FT /translation="MDYNLSDHYALMCHSAPLEFDPSDPEVDLVNQEFDEDDYTDLDVN FT LLSDDLSYLNLLATRIKNSPEDTAEIFDSFDIPLPFAELLDQEIGDEWCEIHNFADLRI FT VENENEFEFVSSHITRHLLIVLNSNPNILWTSTCLLAKLSLIQHVENFDVINYWEAMNR FT RWELITDELKIGFVFRAFNLKGNQFEVIMKLLGDSLLYPGINVIGKLSMVPMFTVHSIP FT AYLDHWFRTDDFQRCKFLSFIRFGEITVPKWKKVVVQFYLRQVFSRVRTKVLIANTDVD FT YWYSLFMRTLVFKSMLSTKNMIKKILNS" FT repeat_region 2172..2180 FT /rpt_type=INVERTED FT /note="terminal" FT misc_feature 2190..2193 FT /note="terminal conserved sequence" XX SQ Sequence 2193 BP; 663 A; 364 C; 396 G; 770 T; 0 other; aagttttttt cgacctgtct ggaccagtac aaataaagaa catggataga cctgctcgag 60 aacatttaaa attcagtaaa gcaaacacca aaaatgaaat tagagaaatg agaatttaca 120 aagatgacac tgctgatgga ctatgtttta gcgaaatcaa tgttggatgc acctccacca 180 ccccgaaaat gtcactttct gattacttca gctccgttag ttgctctttt gatggcgaaa 240 tgcgcatacc tgatatccct ttgaagatgt atggcgacct ccactttcat gaacaattca 300 cgaacgacgt agatttagat ttattatgtt ggcaattact tagttcaaat caagactccc 360 gagccttatg tgttaatatc ttaagaatgg ttacttcact ttcccttggt aatgctttca 420 tctctgaagg tagatatcat tatgctatag atacaactga acaaactagc gctgaagatt 480 ctgatgcttt gcgttttcta gctcgtattg caaaaatagt gattaaaaat gatgttgata 540 aatctgatgt agtcgcagct caacaaacat taatttatta ttactttgga aatagttatc 600 aaggaattca ccttaactgg gattctaaat ccagccaaca aagcatacat ggttactcga 660 cttcagaagt ttgtctcgat cattatattc gtatgaaagt agatcttttc cacggccttc 720 gttcaaagaa tctcgtttat ggaggaaatt atcaacttgt gtatcaggct ttgttttatt 780 attacgtgat tactaatggt agattttcta gtggttttaa tgttcgtaaa gacagtatca 840 aaagttattt tgttcccaat gatgacccaa gtatgtgtaa cgtttctcca cgtaaaccta 900 gtttgagttt aatgtttatt cgagccgttc tcatcactat attgattaaa gattacagcc 960 cagtgaaaga aatacctaag taccttagac aattagaagt ggaaaaccct ttaactaata 1020 gttgcttgat tactgacaat ggtttaagat ctgaggttcc tatgaatgca gctgctccaa 1080 gcgcacctac tcctactgaa ttacccgtat tttcaccccc ctcatcttag ttttatctta 1140 tcccactttt atccgtaatt aaattttcaa attgtgtttt aaatggatta caacttaagt 1200 gatcattacg ctttaatgtg tcattccgct cccttggaat ttgatccttc tgaccctgaa 1260 gttgatctcg tgaatcaaga atttgacgaa gacgattaca cagatttgga cgttaattta 1320 ctatctgacg atcttagtta cttgaattta ctcgctacta gaattaaaaa ttcaccagag 1380 gatactgctg aaatttttga ttcatttgac attcctttac cttttgctga gttacttgat 1440 caagagattg gcgatgaatg gtgtgagatt cacaattttg cagacttacg aattgttgaa 1500 aacgaaaatg agtttgaatt tgttagttcg cacattacga gacatttatt aattgttcta 1560 aattctaatc ctaatatatt gtggacttct acttgtttat tagcgaaatt atctttgata 1620 caacatgttg aaaactttga tgtcattaat tattgggaag caatgaacag aagatgggaa 1680 ttaattactg atgaacttaa aataggtttt gtttttcgag cttttaatct taaaggtaat 1740 cagtttgaag ttattatgaa attgttaggt gacagtcttc tttatcctgg aattaatgtt 1800 attggaaagt taagtatggt acccatgttc actgttcatt ccatcccagc atatttggat 1860 cattggtttc gaactgatga ctttcaaagg tgtaaatttt tatcttttat taggtttgga 1920 gaaattactg tgcccaaatg gaagaaagta gtcgtgcagt tttatttaag acaagttttc 1980 agtagagtta ggactaaggt attgatagct aatactgatg ttgattattg gtattccttg 2040 tttatgagaa ctttggtttt taaaagtatg ctaagcacca aaaacatgat taaaaagata 2100 ctgaattctt gatgtctcgt cggggtggtc tttcatgtcc ttattgtagg tggaatctca 2160 gacatgtgtc aaggtcgaaa tgcagctgat gtc 2193 //