ID X54620; SV 1; linear; genomic RNA; STD; VRL; 3195 BP. XX AC X54620; X17203; XX DT 09-NOV-1990 (Rel. 25, Created) DT 25-MAR-2003 (Rel. 75, Last updated, Version 3) XX DE Rice dwarf virus structural core protein, segment 3, genomic RNA XX KW segment 3; structural core protein. XX OS Rice dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3195 RA Suzuki N.; RT ; RL Submitted (16-FEB-1990) to the INSDC. RL Suzuki N., Biotechnology Institute, Akita Prefectural College of RL Agriculture, Ohgata, Minami-Akita-Gun, Akita 010-04, Japan. XX RN [2] RX DOI; 10.1016/0042-6822(90)90314-H. RX PUBMED; 2219733. RA Suzuki N., Watanabe Y., Kusano T., Kitagawa Y.; RT "Sequence analysis of the rice dwarf phytoreovirus segment S3 transcript RT encoding for the major structural core protein of 114 kDa"; RL Virology 179(1):455-459(1990). XX DR MD5; 46c9da3a28e42708c5e8994a12d14700. XX FH Key Location/Qualifiers FH FT source 1..3195 FT /organism="Rice dwarf virus" FT /segment="3" FT /isolate="A" FT /mol_type="genomic RNA" FT /clone_lib="RD" FT /clone="3RD" FT /db_xref="taxon:10991" FT CDS 39..3098 FT /product="structural core protein" FT /db_xref="GOA:P22472" FT /db_xref="InterPro:IPR015312" FT /db_xref="InterPro:IPR016029" FT /db_xref="PDB:1UF2" FT /db_xref="UniProtKB/Swiss-Prot:P22472" FT /protein_id="CAA38440.1" FT /translation="MDSTGRAYDGASEFKSVLVTEGTSHYTPVEVYNILDELKTIKITS FT TIAEQSVVSRTPIPLSKIGLQDVKKLFDINVIKCGSSLRIVDEPQVTFIVSYAKDIYDK FT FMCIEHDSAYEPSLTMHRVRVIYSMLNDYCAKMISEVPYESSFVGELPVKSVTLNKLGD FT RNMDALAEHLLFEHDVVNAQRENRIFYQRKSAPAVPVIFGDDLEPAVRERANLYHRYSV FT PYHQIELALHALANDLLSIQYCHPTVVYNYLSSRAPNFLRLDDQVSLKLTSAGIGTLMP FT RPVVQLLDYDLVYMSPLALNNLASRLLRKISLHLVMQMVTAVQQDLGEVVSVSSNVTNP FT ASACLVRMNVQGVQTLAVFIAQSMLNPNISYGMISGLTLDCFSNFIYGACLMLFQALIP FT PSALTARQRLDINNRFAYFLIKCHATQATTARLVANQVIYPVDAIDQWQSNGRDVLVAI FT YNNLLPGELVLTNLIQTYFRGNTAQQAAEILIPADQTSYGANETRALSAPYLFGAPINM FT LAPDARLSTYKRDLALPDRSPILITTVEGQNSISIENLRHKTGLIRAMYLNGFVTQPPA FT WIRNANSNTALLSRFLDATPNLLGIYEAILANTYANAVNVYCDSVYRADIPIEWKLHQS FT VDPQDLLFGVFGIVPQYQILNEAVPDFFAGGEDILILQLIRAVYDTLSNKLGRNPADIF FT HLEEVFKVIEEIVSVLVQQKIDVRKYFTESMRSGSFSKPRWDNFLRRPVAQRLPNLYSV FT IMTQADHVYNYMTQLTHIIPITDCFYIVKNSGFVDRGSTGPVIASSSVYENVLKVVHTI FT ADFDAANALRLQRRRVDNTSYTDSLSDMFNGLRSISSSEFVRSVNGRSVFTEGRIDAIK FT VNMRAKFDLQFITEEGGYSKPPNVKKLMFSDFLSFLDSHKSDYRPPLLTVPITIGLNNL FT GETNSNTLRMRSEAIDEYFSSYVGAQILVPINVVDTRVYTEFSELRNFFTGDVVIRDDP FT FDVWDGVKATYIPIGVHGVRLDPNGDQPPL" XX SQ Sequence 3195 BP; 862 A; 681 C; 730 G; 922 T; 0 other; ggcaaaatcg agcgaacaat cctttatcct cgtgagctat ggacagtacc ggccgagcat 60 atgacggtgc gtctgaattc aaaagtgtcc ttgttaccga gggtacttca cactacacac 120 cagtggaagt atataacatc ctcgatgaat tgaaaaccat taaaataacg tctaccatag 180 ctgagcaatc tgtggtgtca cgtactccaa ttcctctctc aaaaattggt ttacaagatg 240 ttaagaaatt gtttgacatt aatgtcataa aatgtggctc atctttgcgg atagtggacg 300 aacctcaagt tacgttcatt gtatcgtatg caaaggatat ctatgataaa ttcatgtgca 360 ttgaacatga ctccgcctac gagccgagtc taacgatgca tagagtgcga gttatttact 420 cgatgctcaa tgactattgt gcaaaaatga tttcggaggt accctacgaa agtagctttg 480 taggggagct ccctgtcaag tcagtgactc taaataaact gggtgacaga aatatggatg 540 ctttagctga acatctcttg tttgagcacg acgttgtgaa tgcgcagcga gagaaccgga 600 ttttctatca aagaaagtcc gcgcctgctg tgccagtcat atttggagat gacctggagc 660 cggctgttcg tgaaagagct aacctctatc atcgatattc ggttccgtat caccaaatcg 720 agctggcatt gcatgcattg gcaaatgatt tactatcaat acagtactgt cacccgacgg 780 tagtgtataa ctatttgagt tccagagctc caaactttct aaggttggat gatcaagtat 840 cgctgaaact aacatccgct gggataggta ctcttatgcc tagacctgtg gtacagctgc 900 ttgattatga tctagtctat atgtcaccgc tagccctgaa caatttggcc tcccgattgt 960 tgagaaagat atctttacac ttagtaatgc aaatggttac tgcagtgcaa caagatctgg 1020 gcgaagtggt gagtgtgtcc tccaacgtta ccaatcccgc cagcgcttgc ctggtaagga 1080 tgaacgttca gggggtccaa actttggctg tattcatagc ccagtccatg ttgaatccaa 1140 acatatctta tggtatgata tctggattaa cgcttgactg tttttcgaac ttcatttacg 1200 gcgcatgtct gatgttattt caagccctca ttccccccag tgctttgacg gctagacaga 1260 gattagacat aaataaccgt tttgcatact ttctaattaa gtgtcatgct actcaagcaa 1320 cgacagctag gcttgtcgcg aatcaggtca tttacccagt ggatgcaatt gatcagtggc 1380 agtctaatgg aagagacgtt ctggttgcaa tttataataa tttgctacca ggtgagttgg 1440 tattaaccaa tttaatacag acttacttta ggggtaacac tgcacagcaa gcggctgaaa 1500 tattgattcc tgcggaccag acttcttatg gcgccaatga gactcgtgct ctatcggcac 1560 cgtatctgtt tggagctcca atcaatatgc tcgccccaga tgctagattg tcaacgtata 1620 aacgcgatct tgctttgcct gaccgctccc caatactgat cacgacagta gaggggcaaa 1680 actcgatctc cattgaaaat ttgaggcata agacgggcct gatacgtgcc atgtatctaa 1740 atggcttcgt cacgcaacct ccggcgtgga ttcgtaatgc aaattcgaat actgcgctgc 1800 tttcacgatt ccttgatgct acgccgaact tattaggtat ttacgaagct attttagcta 1860 atacgtatgc caatgcggta aacgtttatt gcgattccgt ctaccgggca gatataccta 1920 ttgaatggaa gctgcaccaa tcagtagatc ctcaggattt gttgtttggt gtgtttggta 1980 ttgttccaca atatcaaatt ctgaatgaag cggttccgga tttcttcgct gggggtgagg 2040 atatcctaat actacagctc attcgagctg tgtatgatac tttgtcaaat aagcttggga 2100 ggaatcccgc tgacatattt catcttgaag aggtctttaa ggttatagaa gaaatagtgt 2160 cggtcttagt tcaacaaaag attgacgtca gaaagtattt cactgaaagt atgagaagtg 2220 gctcattctc aaaacccaga tgggataact ttctaaggcg tccagtcgct cagcgactac 2280 cgaacttata cagcgtcatc atgacgcagg cagatcatgt gtacaactac atgactcagc 2340 ttacccatat aataccaatt actgattgtt tctatatagt aaagaattca ggattcgtcg 2400 atcgaggctc gactggtcct gtgattgcat cctcatcagt ctatgaaaac gtgcttaagg 2460 tcgttcatac catagctgat tttgatgcag ctaatgcttt acgcctgcag aggagacgtg 2520 tagacaatac gtcttacact gactctcttt ctgacatgtt caatgggtta cggtctatca 2580 gttctagtga attcgttaga tccgtcaatg gtcgctcagt gtttactgaa ggacgcattg 2640 atgcaatcaa agtgaatatg cgagcgaaat tcgatttgca gtttatcact gaggagggcg 2700 gctactcaaa acctccaaat gtgaagaagc ttatgttttc ggactttctg agtttcttag 2760 atagtcataa gagcgattac aggccaccat tgcttactgt gccaatcacc ataggattaa 2820 ataacctggg tgaaactaat tcgaacacac tgcgtatgcg ttcggaggcg attgatgaat 2880 atttttcaag ttacgtcggt gcgcaaattt tggtaccgat taacgtcgta gacactcgag 2940 tctatactga attcagtgag ctacgaaatt tctttactgg tgatgtggtc attcgagatg 3000 acccatttga cgtctgggat ggcgtcaagg caacctacat cccgattggt gtgcatggag 3060 tccgcttgga tccgaatgga gatcagccgc ctctatgagc gcccggatgg catagctctg 3120 cgacgtgcga tgcagcgcaa acgaggacta ggctcccgag ggggctgaag tggattgttt 3180 tgcttggttc ctgat 3195 //