ID X16830; SV 1; linear; genomic RNA; STD; VRL; 3302 BP. XX AC X16830; XX DT 29-MAY-1991 (Rel. 28, Created) DT 19-MAR-2003 (Rel. 75, Last updated, Version 3) XX DE Simian rotavirus SA11 gene for structural protein VP1, genomic RNA XX KW structural protein; VP1. XX OS Simian rotavirus A/SA11 OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. XX RN [1] RP 1-3302 RA Both G.W., Mitchell D.B.; RT ; RL Submitted (11-OCT-1989) to the INSDC. RL G.W. Both and D.B. Mitchell, Commonwealth Scientific and Industrial, RL Research Organization (CSIRO), Laboratory for Molecular Biology, Division RL of Biotechnology, PO BOX 184 NORTH RYDE 2113, AUSTRALIA XX RN [2] RX DOI; 10.1016/0042-6822(90)90487-C. RX PUBMED; 2162107. RA Mitchell D.B., Both G.W.; RT "Completion of the genomic sequence of the simian rotavirus SA11: RT nucleotide sequences of segments 1, 2, and 3"; RL Virology 177(1):324-331(1990). XX DR MD5; bad7657659d3e17af1f68027c15a4ff2. DR EuropePMC; PMC1865955; 17182692. DR EuropePMC; PMC344525; 14766865. XX FH Key Location/Qualifiers FH FT source 1..3302 FT /organism="Simian rotavirus A/SA11" FT /segment="1" FT /strain="SA11" FT /mol_type="genomic RNA" FT /clone="bp 1420-3302 clone 51, bp 1-1149 clone 61, bp FT 1150-1419 clone 106A" FT /db_xref="taxon:10923" FT CDS 19..3285 FT /product="VP1" FT /db_xref="GOA:P22678" FT /db_xref="InterPro:IPR001795" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR022071" FT /db_xref="InterPro:IPR042032" FT /db_xref="UniProtKB/Swiss-Prot:P22678" FT /protein_id="CAA34732.1" FT /translation="MGKYNLILSEYLSFIYNSQSAVQIPIYYSSNSELENRCIEFHSKC FT LENSKNGLSLRKLFVEYNDVIENATLLSILSYSYDKYNAVERKLVKYAKGKPLEADLTV FT NELDYENNKITSELFPTAEEYTDSLMDPAILTSLSSNLNAVMFWLEKHENDVAEKLKVY FT KRRLDLFTIVASTINKYGVPRHNAKYRYEYDVMKDKPYYLVTWANSSIEMLMSVFSHDD FT YLIAKELIVLSYSNRSTLAKLVSSPMSILVALVDINGTFITNEELELEFSNKYLRAIVP FT DQTFDELNQMLDNMRKAGLVDIPKMIQDWLVDRSIEKFPLMAKIYSWSFHVGFRKQKML FT DACAGTLKTEYTENVDDEMYREYTMLIRDEVVKMLEEPVKHDDHLLRDSELAGLLSMSS FT ASNGESRQLKFGRKTIFSTKKNMHVMDDMANERYTPGIIPPVNVDKPIPLGRRDVPGRR FT TRIIFILPYEYFIAQHAVVEKMLIYAKHTREYAEFYSQSNQLLSYGDVTRFLSNNTMVL FT YTDVSQWDSSQHNTQPFRKGIIMGLDILANMTNDAKVLQTLNLYKQTQINLMDSYVQIP FT DGNVIKKIQYGAVASGEKQTKAANSIANLALIKTVLSRISNKHSFATKIIRVDGDDNYA FT VLQFNTEVTKQMIQDVSNDVRETYARMNAKVKALVSTVGIEIAKRYIAGGKIFFRAGIN FT LLNNEKRGQSTQWDQAAILYSNYIVNRLRGFETDREFILTKIMQMTSVAITGSLRLFPS FT ERVLTTNSTFKVFDSEDFIIEYGTTDDEVYIQRAFMSLSSQKSGIADEIAASSTFKNYV FT TRLSEQLLFSKNNIVSRGIALTEKAKLNSYAPISLEKRRAQISALLTMLQKPVTFKSSK FT ITINDILRDIKPFFTVSDAHLPIQYQKFMPTLPDNVQYIIQCIGSRTYQIEDDGSKSAI FT SRLISKYSVYKPSIEELYKVISLHENEIQLYLISLGIPKIDADTYVGSKIYSQDKYRIL FT ESYVYNLLSINYGCYQLFDFNSPDLEKLIRIPFKGKIPAVTFILHLYAKLEVINYAIKN FT GSWISLFCNYPKSEMIKLWKKMWNITSLRSPYTNANFFQD" XX SQ Sequence 3302 BP; 1236 A; 506 C; 608 G; 952 T; 0 other; ggctattaaa gctgtacaat ggggaagtac aatctaatct tgtcagaata tctatcattt 60 atatataatt cacaatctgc agttcaaatt ccaatatatt actcttccaa cagtgaatta 120 gaaaatagat gtattgaatt tcattccaag tgtttagaga actcaaagaa tgggttatcg 180 ttaagaaagt tgtttgttga atataatgat gtcatagaaa atgccacatt actgtcaata 240 ctatcatatt cttacgacaa gtataacgct gttgaaagaa aattggtgaa gtatgcgaaa 300 ggcaaaccat tggaggcaga cttaacagtg aatgaattgg attatgagaa caataaaata 360 acatctgaat tatttccaac agcggaggaa tatacggact cactaatgga tccagcaatt 420 ttaacttcgc tatcatcaaa tttaaatgca gtcatgttct ggttggaaaa acatgaaaat 480 gatgtcgctg aaaaacttaa agtttataaa aggagattag acctattcac catagtagcc 540 tcaacgataa ataaatatgg cgtaccaagg cataacgcaa agtacagata tgaatacgac 600 gtaatgaaag ataaaccata ctacttagtg acatgggcaa attcttcaat tgaaatgtta 660 atgtcagttt tctctcatga cgactatttg atagcaaaag agttaatagt gttatcatat 720 tctaatagat ctactctagc aaagttagtg tcatcaccaa tgtcgatttt ggtagccttg 780 gtggatatta atggaacatt tattacaaat gaagaattag aattggaatt ttcaaataaa 840 tatctacgag caatagttcc ggatcaaaca tttgacgaat taaatcaaat gcttgacaat 900 atgaggaaag ctggattagt tgacatacct aagatgatac aggactggtt agttgatcgt 960 tctatcgaaa aatttccatt aatggctaag atatattcat ggtcgtttca tgttggattt 1020 agaaagcaaa aaatgctaga tgcttgcgct ggtacattga aaactgagta tacagaaaat 1080 gtggacgatg aaatgtatcg ggaatataca atgttaataa gagatgaagt agttaaaatg 1140 cttgaagaac cagttaaaca tgatgatcac ttgctacgag attctgagtt agctggttta 1200 ctatcaatgt cgtcagcatc gaatggtgag tcaaggcagc taaagtttgg taggaaaaca 1260 attttttcaa ctaaaaagaa tatgcatgtc atggatgata tggctaacga aagatacacg 1320 cctggtataa taccaccagt gaatgttgat aaaccaatac cattaggaag aagagatgtt 1380 ccaggaagaa ggactagaat aatattcatt ctgccatacg aatatttcat agcacagcac 1440 gctgtagttg aaaaaatgtt gatttacgca aaacatacga gagaatacgc tgaattttat 1500 tcacaatcaa accaattatt gtcatacggc gatgtaacgc gttttttgtc taataacaca 1560 atggtcttgt atacggatgt atctcagtgg gattcgtctc agcataatac acagccattt 1620 aggaaaggaa taataatggg actggacata ttagctaaca tgactaatga tgctaaagtt 1680 cttcagacat taaatttata caaacaaaca caaatcaatc tcatggattc atacgttcaa 1740 ataccagatg gcaacgtcat taagaaaata caatacgggg cagtagcatc aggagagaaa 1800 caaacgaaag cagcaaattc aatagcaaat ttggcactga ttaaaacggt tttgtcacgt 1860 atttctaaca aacattcatt cgcaacaaaa ataataagag ttgatggaga tgataactat 1920 gcggtgctac aatttaatac agaggtgact aagcagatga tccaagacgt atcgaacgat 1980 gtaagagaaa cttatgcacg catgaatgct aaagttaaag ctctggtatc cacagtagga 2040 atagaaattg ctaaaaggta cattgcaggt ggaaaaatat tttttcgagc tggaataaat 2100 ctacttaata atgaaaagag agggcagagt acgcagtggg atcaagcagc aattttatat 2160 tcaaattata ttgtaaatag acttagagga tttgaaactg atagggagtt tattttaact 2220 aagataatgc agatgacgtc agtcgcaatt actggatcat taagactatt tccttctgaa 2280 cgcgtattaa ctacgaattc aacatttaaa gtatttgact cggaggattt tattatagag 2340 tacggaacga ctgatgacga agtatatata caaagagcgt tcatgtcttt atcaagtcag 2400 aaatcaggaa tagccgatga gatagcggca tcatcaacat ttaaaaatta cgtcacgaga 2460 ctatctgaac agttattatt ttcaaagaat aatatagtgt ccagaggaat agctttgact 2520 gaaaaagcga aattgaattc atacgctcca atatcgcttg agaaaagacg tgcacagata 2580 tcagctttat tgactatgtt gcagaaaccg gtcactttca aatcaagtaa aataacaata 2640 aatgacatac tcagagatat aaaaccattt tttacagtaa gtgatgcaca cttacctata 2700 caataccaaa aatttatgcc aactttgcca gataacgtac agtatataat tcaatgtata 2760 ggatccagaa cttatcaaat tgaagatgac ggttcgaagt cagccatatc tagactaata 2820 tcaaagtatt cagtttataa gccatcaatt gaagaattgt ataaagtgat ttcattgcat 2880 gaaaacgaaa tacaattata tctgatttca ttaggaatac cgaaaataga cgctgacacg 2940 tatgttggat caaagattta ttctcaagat aagtatagaa tactagaatc atacgtgtac 3000 aatttattgt ccattaatta tggatgctat caattatttg atttcaattc accggacttg 3060 gagaagctga taagaatacc atttaaaggg aaaattccag ctgttacatt catattacac 3120 ttatatgcaa agctagaagt tataaactac gctataaaaa atggttcatg gataagccta 3180 ttttgcaatt accctaaatc agaaatgata aaattatgga agaagatgtg gaacatcacg 3240 tcattacgtt cgccgtacac taacgcgaac ttctttcaag attagaacgc ttagatgtga 3300 cc 3302 //