ID X15031; SV 1; linear; genomic RNA; STD; PHG; 3575 BP. XX AC X15031; XX DT 15-FEB-1990 (Rel. 23, Created) DT 21-NOV-2006 (Rel. 89, Last updated, Version 5) XX DE Bacteriophage fr RNA genome XX KW coat protein; lysis protein; replicase. XX OS Enterobacteria phage fr OC Viruses; Riboviria; Leviviridae; Levivirus. XX RN [1] RP 1-3575 RA Adhin M.R.; RT ; RL Submitted (19-APR-1989) to the INSDC. RL Adhin M.R., Dept of Biochemistry Leiden University, Gorlaeus Laboratoria, RL Einsteinweg 5 P O Box 9502, 2300 RA Leiden, Netherland. XX RN [2] RP 1-3575 RX DOI; 10.1016/0167-4781(90)90149-V. RX PUBMED; 2207135. RA Adhin M.R., Avots A., Berzin V., Overbeek G.P., Van Duin J.; RT "Complete nucleotide sequence of the group I RNA bacteriophage fr"; RL Biochim. Biophys. Acta 1050(1-3):104-109(1990). XX RN [3] RX DOI; 10.1016/0167-4781(90)90150-Z. RX PUBMED; 2207136. RA Adhin M.R., Alblas J., Van Duin J.; RT "Secondary structure at the 3' terminal region of RNA coliphages: RT comparison with tRNA"; RL Biochim. Biophys. Acta 1050(1-3):110-118(1990). XX DR MD5; a4dd504c5a6a52093e78e6d5b44edb5c. DR EuropePMC; PMC2621170; 19001294. DR EuropePMC; PMC2772794; 19710143. DR EuropePMC; PMC3430324; 22821966. XX CC see also for genes coding for A-protein and coat protein XX FH Key Location/Qualifiers FH FT source 1..3575 FT /organism="Enterobacteria phage fr" FT /mol_type="genomic RNA" FT /db_xref="taxon:12017" FT regulatory 117..122 FT /note="put. ribosome binding site" FT /regulatory_class="ribosome_binding_site" FT CDS 129..1310 FT /transl_table=11 FT /note="maturation (A) protein (AA 1-393)" FT /db_xref="GOA:P15966" FT /db_xref="InterPro:IPR005563" FT /db_xref="UniProtKB/Swiss-Prot:P15966" FT /protein_id="CAA33135.1" FT /translation="MRKFIPTERMSKSHVVSVREYADGELEDNSLPLIYRSNWSPGQYT FT STGPRTKEWHYPSSYSRGAIGIKALDQGKYARLGTSWGREFEERAGYGMSIDARSCYSL FT FPVSQNLTWIDVPTNVANRATTEVLGKVTQGNFNLGVALAEARSTASQLSTQTIALIKA FT YTAARRGNWRQALRYLALNENRKFNSKSVASRWLELQFGWMPLLSDIQGAYEMLTKVHL FT KAFMPMRAVRQVGQNVSLSGRLTSPAASYKSTCNISRRIVIWFYINDARLAWLSSLGIL FT NPLGIVWEKVPFSFLVDWLLPVGNMLEGLTAPIGCSYQSGTVTDVISGESTITADDIYG FT WDTVRPATAKVQISAVHRGVQSVWPTTGVYVKSPFSMVHTLDALALFRQRLWK" FT regulatory 1324..1329 FT /note="put. ribosome binding site" FT /regulatory_class="ribosome_binding_site" FT CDS 1336..1728 FT /transl_table=11 FT /note="coat protein (AA 1-130)" FT /db_xref="GOA:P03614" FT /db_xref="InterPro:IPR002703" FT /db_xref="InterPro:IPR015954" FT /db_xref="PDB:1FR5" FT /db_xref="PDB:1FRS" FT /db_xref="UniProtKB/Swiss-Prot:P03614" FT /protein_id="CAA33136.1" FT /translation="MASNFEEFVLVDNGGTGDVKVAPSNFANGVAEWISSNSRSQAYKV FT TCSVRQSSANNRKYTVKVEVPKVATQVQGGVELPVAAWRSYMNMELTIPVFATNDDCAL FT IVKALQGTFKTGNPIATAIAANSGIY" FT CDS 1691..1906 FT /transl_table=11 FT /note="lysis protein (AA 1-71)" FT /db_xref="GOA:P19903" FT /db_xref="InterPro:IPR022599" FT /db_xref="UniProtKB/Swiss-Prot:P19903" FT /protein_id="CAA33137.1" FT /translation="MQQPSQPTRESTKKPVPFQHEEYPCQNQQRSSTLYVLICLAIFLS FT KFTNQLLASLLDLLIRIVTTLQQLLT" FT CDS 1762..3399 FT /transl_table=11 FT /note="replicase (AA 1-545)" FT /db_xref="GOA:P15965" FT /db_xref="InterPro:IPR005093" FT /db_xref="InterPro:IPR007096" FT /db_xref="UniProtKB/Swiss-Prot:P15965" FT /protein_id="CAA33138.1" FT /translation="MSKSTKKFNSLCIDLSRDLSLEVYQSIASVATGSSDPHSDDFTAI FT AYLRDELLTKHPNLGDGNDEATRRSLAIAKLLEANDRCGQINRDGFLHDATASWDPDVL FT QTSIRSLIGNLLSGYSSQLFRHCTFSNGASMGHKLQDAAPYKKFAEQATVTPRALKAAV FT LVKDQCSPWIRHSHVFPESYTFRLVGGNGVFTVPKNNKIDRAACKEPDMNMYLQKGVGG FT FIRRRLKTVGIDLNDQTINQRLAQQGSRDGSLATIDLSSASDSISDRLVWSFLPPELYS FT YLDMIRSHYGYVNGKMIRWELFSTMGNGFTFELESMIFWAIVRATQIHFRNTGTIGIYG FT DDIICPTEIAPRVLEALSFYGFKPNLRKTFTSGSFRESCGAHYFRGVDVKPFYIKKPIT FT DLFSLMLILNRIRGWGVVNGIADPRLYEVWEKLSRLVPRYLFGGTDLQADYYVVSPPIL FT KGIYSKMNGRREYAEARTTGFKLARIARWRKHFSDKHDSGRYIAWFHTGGEITDSMKSA FT GVRVMRTSEWLQPVPVFPQECGPASSPQ" XX SQ Sequence 3575 BP; 875 A; 887 C; 950 G; 863 T; 0 other; gggtgggacc cctttcgggg tcctgctcga cttcctgtca agctaaatgc catttttaat 60 gtctttagcg agacgctacc atggctatcg ctgtaggtag ccgcaattcc attgctaggg 120 agcctcgtgt gcgaaagttc ataccaaccg agagaatgag taagagccac gtggtctccg 180 tccgcgaata tgctgacggg gaactcgagg ataactcttt accgttgatt taccgatcca 240 attggtcgcc gggccagtac acaagtacgg gtccgcgcac aaaggaatgg cactacccat 300 cgtcctactc acgtggggcg ataggaatca aggctcttga tcaaggtaag tacgcacgat 360 tgggcacatc gtggggccgc gagttcgaag aacgtgccgg ttatggcatg tctatcgacg 420 cacgtagttg ttatagccta ttccccgtta gtcaaaactt aacatggata gacgtaccaa 480 cgaacgtagc taatcgcgcc acgactgagg tcttaggtaa ggtcactcaa ggtaatttta 540 accttggcgt ggcccttgct gaagcccggt ctacggcctc acaactgtcg acgcaaacca 600 tcgcgttgat taaggcgtac accgcggctc gccgcgggaa ctggcgccag gcactccgct 660 acttagcgct gaacgagaat cgaaaattca attcgaagtc cgtcgcaagc aggtggctgg 720 agttgcagtt cgggtggatg ccgcttctca gcgatatcca aggtgcgtat gagatgctca 780 ccaaagtgca tcttaaggca tttatgccta tgcgtgccgt gaggcaagtc ggacaaaacg 840 tcagtttgtc tggccggctc acttctccgg ctgcaagcta taagtctacg tgcaacatat 900 cacgacgcat tgtgatatgg ttttacataa acgatgcacg tctggcttgg ctgtcctcct 960 tagggatttt gaacccgcta ggaatagtgt gggaaaaggt cccgttctct ttcctggtcg 1020 attggttgct gccggttggg aacatgcttg aggggcttac cgccccgata ggctgttcgt 1080 atcaatcggg aaccgtaacc gacgtaatat caggagagtc gacaataacc gccgatgaca 1140 tctatggttg ggatacagtg cgacctgcaa ccgctaaggt gcaaatcagt gctgtccacc 1200 ggggggtaca aagcgtgtgg cccacaacgg gcgtatacgt taagtcacct ttctcgatgg 1260 tccatacctt agatgccttg gcacttttca ggcaacgcct ctggaaatag aggccctaac 1320 cgaagggaga gccacatggc ttcgaacttt gaagagttcg ttctcgtcga caatggcgga 1380 acgggagatg taaaagtcgc tccgagcaac ttcgctaacg gggttgcaga atggatcagc 1440 tcgaactcac gttctcaggc ttacaaagtg acctgtagcg tgcgtcagag ctctgcgaac 1500 aatcggaaat acaccgtcaa ggtcgaggtg ccgaaagtgg caactcaggt ccaaggcggc 1560 gttgagcttc ctgttgcggc gtggcgctcg tacatgaata tggaattaac tattccggta 1620 ttcgcgacga acgacgactg tgccttaatc gttaaggcat tgcaaggcac ctttaaaact 1680 ggtaacccaa ttgcaacagc catcgcagcc aactcgggaa tctactaaga aacccgtgcc 1740 attccaacat gaggaatacc catgtcaaaa tcaacaaaga agttcaactc tttatgtatt 1800 gatttgtctc gcgatctttc tctcgaagtt taccaatcaa ttgctagcgt cgctactgga 1860 tcttctgatc cgcatagtga cgactttaca gcaattgctt acctaaggga cgagctttta 1920 acaaagcatc cgaacctagg ggatggtaac gacgaagcaa cccgcagaag cctagctatc 1980 gctaagctgc tggaggcgaa tgaccgttgt ggtcagataa atagggatgg tttcttacat 2040 gacgcaaccg cgtcgtggga tccggatgtt ttacaaacca gcatccgtag ccttattggt 2100 aacctccttt ctggctatag cagtcagttg tttagacact gtacattctc aaacggtgcc 2160 tctatggggc acaagttgca ggatgcagcg ccttataaga agttcgctga acaagcaacc 2220 gtgacgccga gggcgttgaa agcggcagtg ctggtcaaag atcagtgcag tccctggatc 2280 cgtcactcgc acgtcttccc cgagtcatat acatttaggc tcgtgggagg caacggtgtg 2340 tttactgttc cgaagaacaa taaaatagat cgggctgctt gcaaagagcc tgatatgaat 2400 atgtacttac agaaaggggt cggcggtttc atccgtcgcc gccttaagac tgtgggtata 2460 gacttgaacg atcaaacgat caatcaacgc ctggctcaac aaggtagccg tgatgggtct 2520 ttggcgacga tagacttatc gtctgcttct gactccatca gcgaccgcct agtgtggagt 2580 tttctcccac ctgagctata ttcatatctc gacatgattc gaagccacta cggttacgta 2640 aatggcaaga tgattcgttg ggaactattt tcgacgatgg gtaatgggtt cacctttgaa 2700 ctagagtcca tgattttctg ggctatagtc agggctactc agatccattt tcgtaacacc 2760 ggaaccattg gcatctatgg ggacgatatt atatgcccca cagagattgc acctcgcgtg 2820 ctggaagcac tgagcttcta cggtttcaaa ccgaatctac gaaagacgtt cacgtccggc 2880 tcttttcgcg agagctgcgg cgcgcactat ttccgtggtg tcgatgttaa accattttat 2940 atcaagaaac caatcactga cctattctcc ctaatgctta tacttaaccg tatacgcgga 3000 tggggggtag tcaacggaat agcagaccca cgcctctacg aggtatggga gaagctctcc 3060 agattggtac cgagatattt atttggtggg acggacctgc aggccgatta ctacgtcgtg 3120 tcacctccta ttctgaaagg aatttattcc aagatgaatg ggagacgcga gtatgccgaa 3180 gctagaacaa caggcttcaa gctcgctcgc atcgcgaggt ggcgaaagca cttttccgat 3240 aagcacgact caggtcggta cattgcgtgg ttccatactg gaggtgagat caccgatagt 3300 atgaagtccg ccggtgtacg cgttatgcgt acttcggagt ggctacagcc ggttcccgtg 3360 ttccctcagg aatgcgggcc agcgagctct cctcagtagc aaaactgagg gacccccgta 3420 agcggggtgg gtgtgctcga aagagcacgg gtccgcgaaa gcggtggctc atcagaaatg 3480 gtgggtgagg gttcgccctc taggactggc cccgaaaggt caggcccggg attctcccga 3540 ttttggtagc tagttgcttg gctagctacc accca 3575 //