ID X14006; SV 1; linear; genomic RNA; STD; VRL; 7073 BP. XX AC X14006; XX DT 21-MAR-1989 (Rel. 19, Created) DT 24-FEB-1999 (Rel. 59, Last updated, Version 9) XX DE Pea early browning virus (PEBV) genomic RNA1 for 141K, 201K, 30K and 12K DE proteins XX KW 12 kDa protein; 141 kDa protein. XX OS Pea early-browning virus OC Viruses; Riboviria; Virgaviridae; Tobravirus. XX RN [1] RP 1-7073 RA MacFarlane S.A.; RT ; RL Submitted (12-JAN-1989) to the INSDC. RL MacFarlane S.A., John Innes Institute, AFRC Institute of Plant Science RL Research, Colney Lane, Norwich, NR4 7UH, UK. XX RN [2] RP 1-7073 RX DOI; 10.1093/nar/17.6.2245. RX PUBMED; 2495522. RA MacFarlane S.A., Taylor S.C., King D.I., Hughes G., Davies J.W.; RT "Pea early browning virus RNA1 encodes four polypeptides including a RT putative zinc-finger protein"; RL Nucleic Acids Res. 17(6):2245-2260(1989). XX DR MD5; 729e6836bf1713fca24908619f854a86. DR RFAM; RF01101; TLS-PK6. XX CC Data kindly reviewed (12-Apr-1989) by MacFarlane S.A. XX FH Key Location/Qualifiers FH FT source 1..7073 FT /organism="Pea early-browning virus" FT /strain="British" FT /isolate="SP5" FT /mol_type="genomic RNA" FT /db_xref="taxon:12294" FT CDS 128..5428 FT /transl_except=(pos:3866..3868,aa:OTHER) FT /note="201K protein" FT /note="readthrough stop codon" FT /db_xref="GOA:Q9WJD8" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9WJD8" FT /protein_id="CAB37343.1" FT /translation="MAQGLKISQLLNIDEFGAEQRGQFLDLMITKPDSQLGAMMQRILT FT DKIDDSLRERKTRETVVIHELLSQKDQNKLMEIYPEFNIVFKDDKNMVHGFAAAERKLQ FT ALLLMARVPKLEPVDDIGGQWSFWLSRGDKRVHSSCPLIDMRDKQRELQRQNFLRVFRD FT NATTSESRISDDQFDMYNAFKGDIDVANFVRCNNTFQDCNCRGYRADGTRIGATNAIAL FT HSLYDFKLDDVADAMIEKGTKFLHAAMLFAPEAEIEKEGPLPSVDGYYERKEGSLISSE FT KIFFGFNNDPSYAYIHDWSEYKKYLRGEPFSRRGHVFMFEPWQARGDTMFFTLYRMTGV FT PMTNLLGNEYYRRLHISRWEGMVVVPVFEIDEITKKLTKSSMYVEKAYMDKCLDYVSRL FT SDQQLTINNVKSFMSSNNWVLFINGAAVKNKQSVDPRRLQLLAQTLLVKEKLMRPLMTE FT MREKMVLRATAVNSVTGTLKVAWGNYFDGSLRRKCLLKLAQVLGTETGLEVLEVKDAPK FT YIEINDYLTAIFNETTEKTDGSLPDLDEAKRNSDKISKEAAEAAVQCVKMQFPKFESSD FT SLKEPLIRKIDGDVKKKGKQRRNCGLLTGWTKLLNNTHAHVGWQRLFLKSKIESESEGR FT KPMTDEEIEAALDDIMELNDVNLEAYKTRTVNKEFDIFTTWLASTYDTGLDSEKELITN FT LLATAAVRNKKALSDKLAMLIDVDDSVNSFLRSLSDTDDDSTDVADCSASVSSDTSCVS FT SVVFRPTVPPGFEDVNLRKGKTVIVDNDAAESSSSSERNRNHFANFEVIENCRFGDAPK FT ETGDFSVDSRLEFIHYLRCLICAQNNELLGKYRDYEMGVVRPGGKGYPDELGVFDLALK FT KWIIKPPSCSYNKAFVPDVSAKEQGKWIGYLVDASWGKQGIDAFSCYTNVAWKADIAIV FT CSQTFLCNERIILKNLAGLEVVPLRCKFKLVDGVPGCGKSTMIVNTANPVFDVVLSTCK FT EATEDLLEKFAAKKFGINLKKRVKTVDSFLMHCSDGNCVGDLLHFDEALMAHAGMVFFC FT AQIAKAKKVICQGDQKQIAYKPRVSQLTLRFTSLIGRFDEVEEKRMSYRCPVDVALTLD FT RFYTGKVVTKNSVLRSMDVKRIGSKEQVEMEHGIQYLTFLQSEKKDIANLLCQRKVKSF FT VNTVHEAQGKTFKKVRLVRLKPTDDVLARGQEYQIVALSRHTQSLVYETVKDDEVSALI FT RDSAACTKSSLMRYFVEDAMKXRCRSRFDVFRHHDGPCSVPDSGTPVDIQSWYDELFPL FT NSVRDTSLDGYMVNTEDCNLRLTDVTLKSGNWKDKFVEEKETCLVPVLRTAMPDKRKTT FT QLEGLLALQKRNQAAPDLQQNVHSTLLVEDTIKRLKEVVYDVEKIRSDPINNKAHMQKW FT WRNQSTAVQAKVMQDVRELHEIDFSSYMFMIKSDVKPKMDSTPQHEYSALQTVIYHEKL FT INSLFGPIFKEINERRLDAIHPHFVFNTRMTASDLNDRVRCLHPDADYDFIEVDLSKFD FT KSANRFHLQLQLEIYRMFGLDEWAAFLWEVSHSQTTVRDVQNGMTAYIWYQQKSGDADT FT YNANSDRTMCALLSELPLEKCVLMTYGGDDSLIVFPKGLKLVDPCEKLATKWNFECKIF FT KFLVPAFCGKFLIRVQDKLVFVPDPVKTVTKFGKKCIRDVQHLAEIYISLNDGNRLLSD FT ANVLYALDCAVADRYRYGKSSIYALCALWKHIRSFTAFCTLFRQNGKELNPNDVDWEKA FT KAAVNQFYDW" FT CDS 128..3868 FT /note="141K protein" FT /db_xref="GOA:Q84701" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q84701" FT /protein_id="CAA32172.1" FT /translation="MAQGLKISQLLNIDEFGAEQRGQFLDLMITKPDSQLGAMMQRILT FT DKIDDSLRERKTRETVVIHELLSQKDQNKLMEIYPEFNIVFKDDKNMVHGFAAAERKLQ FT ALLLMARVPKLEPVDDIGGQWSFWLSRGDKRVHSSCPLIDMRDKQRELQRQNFLRVFRD FT NATTSESRISDDQFDMYNAFKGDIDVANFVRCNNTFQDCNCRGYRADGTRIGATNAIAL FT HSLYDFKLDDVADAMIEKGTKFLHAAMLFAPEAEIEKEGPLPSVDGYYERKEGSLISSE FT KIFFGFNNDPSYAYIHDWSEYKKYLRGEPFSRRGHVFMFEPWQARGDTMFFTLYRMTGV FT PMTNLLGNEYYRRLHISRWEGMVVVPVFEIDEITKKLTKSSMYVEKAYMDKCLDYVSRL FT SDQQLTINNVKSFMSSNNWVLFINGAAVKNKQSVDPRRLQLLAQTLLVKEKLMRPLMTE FT MREKMVLRATAVNSVTGTLKVAWGNYFDGSLRRKCLLKLAQVLGTETGLEVLEVKDAPK FT YIEINDYLTAIFNETTEKTDGSLPDLDEAKRNSDKISKEAAEAAVQCVKMQFPKFESSD FT SLKEPLIRKIDGDVKKKGKQRRNCGLLTGWTKLLNNTHAHVGWQRLFLKSKIESESEGR FT KPMTDEEIEAALDDIMELNDVNLEAYKTRTVNKEFDIFTTWLASTYDTGLDSEKELITN FT LLATAAVRNKKALSDKLAMLIDVDDSVNSFLRSLSDTDDDSTDVADCSASVSSDTSCVS FT SVVFRPTVPPGFEDVNLRKGKTVIVDNDAAESSSSSERNRNHFANFEVIENCRFGDAPK FT ETGDFSVDSRLEFIHYLRCLICAQNNELLGKYRDYEMGVVRPGGKGYPDELGVFDLALK FT KWIIKPPSCSYNKAFVPDVSAKEQGKWIGYLVDASWGKQGIDAFSCYTNVAWKADIAIV FT CSQTFLCNERIILKNLAGLEVVPLRCKFKLVDGVPGCGKSTMIVNTANPVFDVVLSTCK FT EATEDLLEKFAAKKFGINLKKRVKTVDSFLMHCSDGNCVGDLLHFDEALMAHAGMVFFC FT AQIAKAKKVICQGDQKQIAYKPRVSQLTLRFTSLIGRFDEVEEKRMSYRCPVDVALTLD FT RFYTGKVVTKNSVLRSMDVKRIGSKEQVEMEHGIQYLTFLQSEKKDIANLLCQRKVKSF FT VNTVHEAQGKTFKKVRLVRLKPTDDVLARGQEYQIVALSRHTQSLVYETVKDDEVSALI FT RDSAACTKSSLMRYFVEDAMK" FT CDS 5515..6303 FT /note="30K protein" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q84702" FT /protein_id="CAA32173.1" FT /translation="MDIIRAADVKTLNTLKEKTFNLTNFSNLNAWQLMVDGARKRPKYF FT HRRRETVLSNVAGSLTEHKLGIFTIEDVRNVKSYKFLRIVGIQIKVTSHLPRDTSGFLQ FT IDLIDSRLTDGRKRSKVLQRFVAKACDNTSVVQYKFDYCVSTRENIADLWKIGTVAVNV FT PVVDDCYPFSVEVSMIWVATDSTTRLNVEELNQTDYLEGEFSDQEMFDTFMDLKHAEMK FT SVDVKFKGNYLPKASVDRNISNMERIPDSIKKSGSIKKKR" FT CDS 6300..6623 FT /note="12K protein" FT /db_xref="InterPro:IPR007968" FT /db_xref="UniProtKB/TrEMBL:Q84703" FT /protein_id="CAA32174.1" FT /translation="MKCAVSTCEVEAQSNKFTCSMKCANKYNRHLAEKYSIKRKCECVN FT CGWYPAIEVRADFIEVYFCCGMKHLSKVISSNPKRKERLNSPKRLFRDDIDFGLTGLFN FT ESC" XX SQ Sequence 7073 BP; 2167 A; 1120 C; 1738 G; 2048 T; 0 other; ataaaacatc agaagatttg gagggacctc cttaactttt ggactgaatt taccgggacc 60 ggtttatttc aggttttatt tttatttttc ttattttgta aagttacgtt tgttcataac 120 aaagataatg gctcagggtt tgaaaatttc acagttacta aacattgatg aatttggtgc 180 tgaacagagg ggtcaatttc ttgatctcat gatcacaaaa ccagatagtc aattgggtgc 240 tatgatgcaa aggatattga ctgataaaat cgatgattct ttgcgtgaga ggaagacaag 300 ggagactgtc gtgattcatg aattgttgtc tcaaaaagat caaaataaac ttatggagat 360 ttatccagag tttaatattg tttttaaaga tgacaaaaac atggtccatg gttttgctgc 420 tgctgaaaga aagttgcaag ctttgttgct gatggctaga gttcctaaac tcgaacctgt 480 agatgacatt ggtgggcaat ggtctttttg gctaagcaga ggtgacaagc gagtacattc 540 ttcgtgtcct ttaattgaca tgagggataa acagagagaa ctgcagagac agaattttct 600 tcgtgtgttc cgggacaatg ctacaacttc ggaatccaga atttctgatg atcagtttga 660 catgtacaat gcatttaaag gagacattga cgttgctaac ttcgttaggt gcaacaatac 720 gtttcaagac tgcaactgca gaggttacag agcagatggg acgagaattg gagctactaa 780 cgccattgca ttgcacagct tatacgactt caaattagat gatgtagctg acgctatgat 840 tgaaaagggg acgaagtttt tgcatgctgc gatgttgttt gcgcctgagg ctgagataga 900 gaaggaagga cctcttccaa gtgtagatgg ttattacgag cgaaaagaag gctcattgat 960 ttcgtccgag aaaatctttt tcggatttaa caacgatcct tcttacgctt atatccatga 1020 ctggtctgag tacaagaagt acctgagagg tgagcccttt tcaaggaggg gacacgtttt 1080 tatgtttgaa ccgtggcaag cgagaggcga cactatgttc ttcacgttat acaggatgac 1140 aggagtacca atgactaact tgttaggcaa tgaatactac agacgtctgc atatatcaag 1200 atgggaagga atggttgtgg ttcctgtgtt tgagatagac gaaatcacaa agaaactaac 1260 aaagagttca atgtatgtcg agaaggcgta tatggacaaa tgtttggatt atgtttcaag 1320 gttatctgat caacagctga cgattaacaa cgttaagtcg tttatgagct cgaacaactg 1380 ggtcttgttc attaacgggg ctgccgttaa gaacaaacaa tcagttgatc cgaggagatt 1440 gcaattatta gctcagactc ttttagtcaa ggagaaactc atgagaccac taatgactga 1500 aatgcgagag aagatggtgt tacgagcgac tgcggtcaac tcggtaacag gaacactgaa 1560 agtagcttgg ggcaactact tcgacggaag tctgcgtagg aaatgcctac tgaagctggc 1620 tcaagtgctt ggaacagaaa cagggttaga agtgctggaa gtaaaagatg cacctaagta 1680 cattgaaatc aatgattatc ttacggcaat ctttaacgaa accactgaaa aaaccgatgg 1740 atctttacca gacctagacg aagctaagag gaattcagac aagatatcca aggaggctgc 1800 cgaagccgct gtacaatgtg ttaaaatgca attcccgaag tttgaaagct ccgattctct 1860 gaaggaacca ttaatccgga agattgatgg tgacgttaag aaaaaaggaa aacagaggag 1920 gaattgcggc ttgttaaccg gttggacgaa gttactcaac aacacccatg ctcacgtcgg 1980 atggcaaagg ttgtttttga aatctaagat cgaaagtgag agcgagggtc gcaagccaat 2040 gactgatgaa gaaattgagg ctgctttaga tgatatcatg gaattaaacg atgtgaattt 2100 ggaagcttat aagacaagaa ccgtcaataa ggaattcgat atctttacta cgtggttagc 2160 tagcacttac gacacaggtt tggattcgga aaaggagttg attactaatc tcttggccac 2220 agctgcggtt agaaataaga aggctctttc tgataaacta gcaatgttga tagatgtgga 2280 cgactcagtg aattcatttt tgcgatcgct aagcgatact gatgatgatt ctactgatgt 2340 tgctgactgc agtgctagtg tttcatccga tacttcatgt gtgtcgagtg ttgtgtttag 2400 accgacagta ccaccaggtt ttgaagacgt taacctgagg aaaggaaaga cagtgattgt 2460 tgacaacgat gcggcggaaa gttcaagttc ttctgagagg aataggaacc acttcgccaa 2520 cttcgaagtc attgaaaact gtagatttgg agacgctcca aaggaaacag gtgatttttc 2580 agtagacagc aggttagagt tcattcatta cttgcgctgt ttgatatgtg cccaaaataa 2640 tgagttactg ggaaaatacc gagactacga aatgggagtg gtcagaccag gaggaaaggg 2700 ttatcctgat gaactgggag tattcgatct agctcttaag aagtggatta tcaaaccgcc 2760 aagttgttct tacaacaagg cttttgtgcc agatgtttca gcgaaggaac aaggaaaatg 2820 gatcggttat ttagtagatg cttcatgggg aaagcaaggg attgatgcat ttagttgtta 2880 tactaacgtg gcctggaagg cggacattgc tattgtgtgc agtcagactt tcttatgcaa 2940 tgaaagaata atacttaaaa accttgcagg tttggaagta gtacctcttc gatgcaagtt 3000 taagttagtc gatggtgtac caggttgtgg gaagtctact atgatagtaa acaccgcaaa 3060 tcctgttttt gatgtggttt tgtctacttg caaggaagca acagaagatc tgctagagaa 3120 atttgctgcc aagaagtttg gaattaatct aaagaaaaga gttaaaactg ttgactcttt 3180 tttgatgcat tgctctgacg gaaactgcgt tggtgatcta cttcattttg acgaagctct 3240 tatggctcat gctgggatgg ttttcttttg cgcgcaaatc gctaaagcta agaaagtgat 3300 atgccaagga gaccagaagc aaattgctta caagccgaga gttagtcaat tgactttgag 3360 gttcacgtca ttgattggaa ggttcgatga ggtggaagaa aaaaggatgt cttaccgttg 3420 tccagtagat gttgctctta cattggatag attctacact gggaaggtgg tgacaaagaa 3480 ttcggttcta cgctcgatgg atgtgaagag aattggctca aaagaacaag tagaaatgga 3540 acatgggatc cagtacttga cctttttgca gagtgagaag aaggacattg caaatttatt 3600 atgtcagcgg aaagtcaagt catttgtaaa cactgttcat gaagctcagg ggaagacatt 3660 caaaaaggtt agacttgtgc ggttgaagcc tactgatgac gtcttggcca gaggacaaga 3720 gtaccagatt gtggccttat ccaggcacac ccagtcattg gtatatgaaa cagtgaaaga 3780 cgatgaagtg agtgctctta ttcgggatag cgctgcttgc acaaagtcct ctttgatgag 3840 gtacttcgtg gaagatgcta tgaaatgacg gtgtcggtca aggttcgatg tctttagaca 3900 ccatgatggt ccttgttcag tacctgattc tggaactcct gtggatatcc agagttggta 3960 tgatgaatta tttccattga attcggtcag agacacgagc cttgacgggt atatggtgaa 4020 tacagaggac tgcaacttga ggttaactga tgtgactttg aagagtggaa attggaaaga 4080 caagtttgtt gaagaaaagg agacctgttt agttcccgtt ctaagaactg ctatgccaga 4140 caaaagaaag acgactcagc tggaaggtct tttggctttg caaaagagaa atcaggccgc 4200 gccagatttg cagcagaatg tgcattcaac tctattggtg gaagacacta tcaagaggtt 4260 gaaagaagta gtttatgatg ttgagaagat cagaagtgat cctattaaca acaaggcgca 4320 catgcaaaaa tggtggcgaa accaaagtac tgctgttcaa gcaaaagtga tgcaagatgt 4380 gagagagttg catgaaatag atttctcgtc gtacatgttc atgattaaat cagatgtcaa 4440 accaaagatg gattcaacac ctcaacatga gtattcggct ttacaaaccg tcatatatca 4500 tgagaagtta atcaattcgt tatttggtcc gatcttcaaa gaaatcaatg aaagaaggtt 4560 agatgctatt catcctcatt tcgtgtttaa cacgaggatg acggcttctg atttgaatga 4620 cagagtgcgg tgcttacacc ccgacgctga ctatgacttt attgaagtag atttatctaa 4680 attcgataag tcagccaata ggtttcactt gcagttgcaa ttggagatct ataggatgtt 4740 tgggttggat gagtgggctg ctttcctttg ggaagtttca cacagtcaaa ctacggtgag 4800 agatgtgcag aatggaatga ctgcttacat ctggtatcag caaaagagtg gagatgctga 4860 cacttacaat gcaaattctg ataggactat gtgtgctttg ctttcagaac tgcctttgga 4920 gaaatgtgtt ttgatgacct atggtggaga cgattcgttg atcgtgtttc caaaaggttt 4980 gaaattggtg gatccttgcg agaagttggc tactaaatgg aattttgaat gtaaaatatt 5040 taagttttta gtaccagcat tctgcgggaa gtttttgatc agagttcagg ataaattagt 5100 ttttgtgccg gatcctgtga aaactgttac aaagttcgga aagaagtgta ttagagatgt 5160 gcaacacttg gcagaaatat acatttcttt gaatgatgga aacaggttac tgagtgacgc 5220 gaatgtgttg tacgcgttag attgcgctgt ggctgacaga tacagatatg gtaaaagttc 5280 catatacgct ttgtgcgcat tatggaagca tattcgaagt tttactgcat tttgtacttt 5340 gttcagacag aacggaaaag agttaaaccc taacgacgtg gattgggaga aggcgaaggc 5400 ggcggtgaat caattttacg attggtaaga ctgaaattct gaatttcttc tttactaagt 5460 taatcccagt tggcggttga ttttgctcta ggagatactt cagaaagaat caaaatggat 5520 atcattcgtg ctgctgacgt taagacgctg aacacgttga aggaaaagac ctttaatttg 5580 actaatttta gcaatctgaa tgcatggcaa ctcatggttg atggtgcaag aaagagacca 5640 aagtattttc atcgtagaag agagaccgtg ttgtcaaacg tggctggttc attaactgaa 5700 cataagctag gtatattcac aatcgaagat gtgcgtaatg ttaaaagtta caagtttctt 5760 agaattgttg gtatacaaat caaagttacc tctcatttac caagagatac ttctggtttc 5820 ttacaaatag acctgattga ctcaagatta actgatggta gaaaaagaag caaagtatta 5880 caaaggttcg tagcaaaggc atgcgacaat acttcagtag tgcaatacaa gttcgattac 5940 tgtgttagta caagagagaa cattgctgat ttgtggaaga taggtacagt tgcagtgaac 6000 gtaccagttg tagatgactg ctaccctttt agtgtagagg tgtctatgat ttgggtggct 6060 actgactcta ctactcgact taatgtcgag gagttaaatc aaactgatta cttagaagga 6120 gagttcagcg atcaggagat gtttgatacc tttatggact taaaacacgc tgagatgaag 6180 tcggttgacg taaagtttaa gggaaattat ttgccgaagg cttcggttga taggaacatt 6240 tccaatatgg agagaatacc agattctatt aagaagtctg ggagcattaa aaagaaaaga 6300 tgaagtgtgc cgtgtcaact tgtgaggttg aagctcagtc gaacaagttt acttgttcta 6360 tgaagtgtgc gaataagtat aatcgtcatt tagccgaaaa gtacagtata aaaagaaagt 6420 gtgaatgtgt taattgtgga tggtatccag cgatcgaagt tcgtgctgac tttattgaag 6480 tgtatttctg ctgcggcatg aaacacttaa gtaaagtgat ttcttctaat ccgaagagga 6540 aggagagatt aaactcacct aaaaggttat tccgagatga catagatttc ggtttaactg 6600 gcttgtttaa cgagtcatgt tagtttgatg agaggaaagt tcctctcgtt taagttgcaa 6660 acctaccgag tagattccta cctagaaaac ctgacaaggt tagtaaagat ggatttgaaa 6720 attgattgga ggcaatttta aattgatgaa cgttcactac attagtagtt tgtttttcaa 6780 ttagcattag tttaagtact attattttgt gtcgtgtgag cgacatttgt gttatgcata 6840 ttagtttgtg tatgagctag gtattggtta atcccatgct taagtggttc taccgtaggg 6900 acgatagttt gttattatta ttattttaag tttgatttgt gaaaatcttc tgctttctga 6960 aaaggtcgtt gaccaagaga aagtgggagg gtgagtaagt actcttgaag tggtgatggt 7020 tacaaggcat agaagggtta aacccttccg cctacgtaag cgttattacg ccc 7073 //